prot_S-ischiensis_contig83.19948.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig83.19948.1
Unique Nameprot_S-ischiensis_contig83.19948.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length153
Homology
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BLAST of mRNA_S-ischiensis_contig83.19948.1 vs. uniprot
Match: D7FRV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV8_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 1.040e-11
Identity = 49/165 (29.70%), Postives = 80/165 (48.48%), Query Frame = 0 
Query:    1 MEALARESWAEVTLVTDGRDKNAMNPTYSVLQEHAKRHLFDFPVQTVQHGDLVSDIRELICADAIVAPRTSSLNEFFLFHSRADTMVVPYECNEMTVR---------------LLLRHRPHVKVWGMATQRG---YSVFEHWRNDAEQRLEMMSWVG-DGLVLCS 146
            +  LA + W  VT +T   +  A+NPT+  L+  A   +    V    +  L++D++E++CADA+   R SS++     HSRA T  VP  C     R               LLL  +   +V+G+  ++    YSV+++W +   Q LEM ++ G  GL  C+
Sbjct:  148 LRVLAAKDWDNVTFLTAAWEDRALNPTFLTLEMMADAGVLGENVHLFNNRTLLTDMKEMLCADALATSR-SSMSFLTFAHSRATTFFVPTPCGNGGFRRMKDVPVKATFDNTTLLLLEKRESEVFGVDWRQNGSDYSVYKNWLDSPHQLLEMTTYKGIKGLQKCT 311
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig83.19948.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRV8_ECTSI1.040e-1129.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig83contigS-ischiensis_contig83:87671..89637 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig83.19948.1mRNA_S-ischiensis_contig83.19948.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig83 85876..89735 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig83.19948.1 ID=prot_S-ischiensis_contig83.19948.1|Name=mRNA_S-ischiensis_contig83.19948.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=153bp
MEALARESWAEVTLVTDGRDKNAMNPTYSVLQEHAKRHLFDFPVQTVQHG
DLVSDIRELICADAIVAPRTSSLNEFFLFHSRADTMVVPYECNEMTVRLL
LRHRPHVKVWGMATQRGYSVFEHWRNDAEQRLEMMSWVGDGLVLCSNQSA
PI*
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