prot_S-ischiensis_contig82.19904.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-ischiensis_contig82.19904.1
Unique Name	prot_S-ischiensis_contig82.19904.1
Type	polypeptide
Organism	Schizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length	295

Homology

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BLAST of mRNA_S-ischiensis_contig82.19904.1 vs. uniprot
Match: D7G5V8_ECTSI (ATP-dependent Clp protease proteolytic subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5V8_ECTSI)

HSP 1 Score: 293 bits (749), Expect = 4.560e-96
Identity = 147/157 (93.63%), Postives = 152/157 (96.82%), Query Frame = 0

Query:   79 TVGEGKDQMDVISRLLKDRILLLGQEVTDEVGNVLVAQLLYLANDDPEKDITLYINSPGGSVSAGLAIYDTLQFIPCDVATVCFGMAASMGAFLLGAGTQGKRKSLPNSRIMIHQPLGGAAGQAADIEIQAKEILFTKRLLNRYMAEYTDQPVDKIE 235
            TVGEG +QMDV+SRLLKDRILLLGQEV DEVGNVLVAQLLYLANDDPEKDITLYINSPGGSVSAGLAIYDT+QFIPCDVATVCFGMAASMGAFLLGAG+ GKRKSLPNSRIMIHQPLGGAAGQAADIEIQAKEILFTKRLLN YM+EYTDQP DKIE
Sbjct:   68 TVGEGSEQMDVMSRLLKDRILLLGQEVNDEVGNVLVAQLLYLANDDPEKDITLYINSPGGSVSAGLAIYDTMQFIPCDVATVCFGMAASMGAFLLGAGSAGKRKSLPNSRIMIHQPLGGAAGQAADIEIQAKEILFTKRLLNGYMSEYTDQPADKIE 224

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BLAST of mRNA_S-ischiensis_contig82.19904.1 vs. uniprot
Match: A0A836C9E3_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9E3_9STRA)

HSP 1 Score: 286 bits (733), Expect = 2.660e-94
Identity = 143/157 (91.08%), Postives = 149/157 (94.90%), Query Frame = 0

Query:   79 TVGEGKDQMDVISRLLKDRILLLGQEVTDEVGNVLVAQLLYLANDDPEKDITLYINSPGGSVSAGLAIYDTLQFIPCDVATVCFGMAASMGAFLLGAGTQGKRKSLPNSRIMIHQPLGGAAGQAADIEIQAKEILFTKRLLNRYMAEYTDQPVDKIE 235
            TVGEGKDQMDV+SRLLKDRILLLG EV DEVGNV+VAQLLYLA  DPEKDITLYINSPGGSVSAGLAIYDT+QFIPCDVATVCFGMAASMGAFLLGAG QGKRKSLPN+RIMIHQPLGGA GQAADIEIQAKEILF K LLNRYMA+YTDQPV+KIE
Sbjct:   23 TVGEGKDQMDVVSRLLKDRILLLGSEVNDEVGNVMVAQLLYLAQSDPEKDITLYINSPGGSVSAGLAIYDTMQFIPCDVATVCFGMAASMGAFLLGAGAQGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFIKSLLNRYMADYTDQPVEKIE 179

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BLAST of mRNA_S-ischiensis_contig82.19904.1 vs. uniprot
Match: A0A7S2SET8_9STRA (ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SET8_9STRA)

HSP 1 Score: 271 bits (693), Expect = 6.520e-88
Identity = 134/156 (85.90%), Postives = 146/156 (93.59%), Query Frame = 0

Query:   79 TVGEGKDQMDVISRLLKDRILLLGQEVTDEVGNVLVAQLLYLANDDPEKDITLYINSPGGSVSAGLAIYDTLQFIPCDVATVCFGMAASMGAFLLGAGTQGKRKSLPNSRIMIHQPLGGAAGQAADIEIQAKEILFTKRLLNRYMAEYTDQPVDKI 234
            +VGEGKDQ DV+SRLLKDRILLLG EV DEV NVLVAQLLYLAN+DP K+ITLYINSPGGSVSAGLAIYDT+QFIPCDV TVCFGMAASMGAFLLGAG QGKR SLPN+RIMIHQPLGGAAGQAADIEIQAKEIL+TK LLN++MA+YT QP++KI
Sbjct:   58 SVGEGKDQKDVLSRLLKDRILLLGSEVNDEVANVLVAQLLYLANEDPYKEITLYINSPGGSVSAGLAIYDTMQFIPCDVRTVCFGMAASMGAFLLGAGAQGKRASLPNARIMIHQPLGGAAGQAADIEIQAKEILYTKELLNKFMADYTGQPIEKI 213

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BLAST of mRNA_S-ischiensis_contig82.19904.1 vs. uniprot
Match: A0A7S2JVK3_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JVK3_9STRA)

HSP 1 Score: 266 bits (681), Expect = 7.550e-86
Identity = 134/156 (85.90%), Postives = 142/156 (91.03%), Query Frame = 0

Query:   79 TVGEGKDQMDVISRLLKDRILLLGQEVTDEVGNVLVAQLLYLANDDPEKDITLYINSPGGSVSAGLAIYDTLQFIPCDVATVCFGMAASMGAFLLGAGTQGKRKSLPNSRIMIHQPLGGAAGQAADIEIQAKEILFTKRLLNRYMAEYTDQPVDKI 234
            TV     Q+DVISRLLKDRILLLG +V DEV NVLVAQLLYLAN+DPEKDITLYINSPGGSVSAGLAIYDT+QFIPCDV TVCFGMAASMGAFLLGAG +GKRKSLPN+RIMIHQPLGGA GQAADIEIQAKEILF K  LN+YMAEYTDQP+DKI
Sbjct:   61 TVDGQSGQLDVISRLLKDRILLLGTDVNDEVANVLVAQLLYLANEDPEKDITLYINSPGGSVSAGLAIYDTMQFIPCDVQTVCFGMAASMGAFLLGAGAKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFIKACLNKYMAEYTDQPIDKI 216

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BLAST of mRNA_S-ischiensis_contig82.19904.1 vs. uniprot
Match: A0A1Z5K0G9_FISSO (ATP-dependent Clp protease proteolytic subunit n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K0G9_FISSO)

HSP 1 Score: 266 bits (680), Expect = 1.140e-85
Identity = 133/157 (84.71%), Postives = 144/157 (91.72%), Query Frame = 0

Query:   79 TVGEGKDQMDVISRLLKDRILLLGQEVTDEVGNVLVAQLLYLANDDPEKDITLYINSPGGSVSAGLAIYDTLQFIPCDVATVCFGMAASMGAFLLGAGTQGKRKSLPNSRIMIHQPLGGAAGQAADIEIQAKEILFTKRLLNRYMAEYTDQPVDKIE 235
            TV     Q+DV+SRLLKDRILLLG +V DEV NVLVAQLLYLAN+DP KDITLYINSPGGSVSAGLAIYDT++FIPCDV TVCFGMAASMGAFLLGAGT GKRKSLPN+RIMIHQPLGGA GQAADIEIQAKEILFTK LLN+Y+A+YTDQPV+KIE
Sbjct:   63 TVDGKNGQLDVVSRLLKDRILLLGTDVNDEVANVLVAQLLYLANEDPNKDITLYINSPGGSVSAGLAIYDTMKFIPCDVQTVCFGMAASMGAFLLGAGTPGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFTKALLNKYIADYTDQPVEKIE 219

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BLAST of mRNA_S-ischiensis_contig82.19904.1 vs. uniprot
Match: B8BRT2_THAPS (ATP-dependent Clp protease proteolytic subunit n=2 Tax=Thalassiosira TaxID=35127 RepID=B8BRT2_THAPS)

HSP 1 Score: 266 bits (679), Expect = 1.620e-85
Identity = 134/157 (85.35%), Postives = 142/157 (90.45%), Query Frame = 0

Query:   79 TVGEGKDQMDVISRLLKDRILLLGQEVTDEVGNVLVAQLLYLANDDPEKDITLYINSPGGSVSAGLAIYDTLQFIPCDVATVCFGMAASMGAFLLGAGTQGKRKSLPNSRIMIHQPLGGAAGQAADIEIQAKEILFTKRLLNRYMAEYTDQPVDKIE 235
            TV  G  Q+DVISRLLKDRILLLG +V DEV NVLVAQLLYLAN+DPEKDITLYINSPGGSVSAGLAIYDT+QFIPCDV TVCFGMAASMGAFLLGAG  GKRKSLPN+RIMIHQPLGGA GQAADIEIQAKEILF K  LN+Y+AEY DQPV+KIE
Sbjct:   63 TVEGGSGQLDVISRLLKDRILLLGTDVNDEVANVLVAQLLYLANEDPEKDITLYINSPGGSVSAGLAIYDTMQFIPCDVQTVCFGMAASMGAFLLGAGAPGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVKACLNKYIAEYCDQPVEKIE 219

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BLAST of mRNA_S-ischiensis_contig82.19904.1 vs. uniprot
Match: A0A8J2T3N8_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T3N8_9STRA)

HSP 1 Score: 264 bits (675), Expect = 7.700e-85
Identity = 129/154 (83.77%), Postives = 142/154 (92.21%), Query Frame = 0

Query:   81 GEGKDQMDVISRLLKDRILLLGQEVTDEVGNVLVAQLLYLANDDPEKDITLYINSPGGSVSAGLAIYDTLQFIPCDVATVCFGMAASMGAFLLGAGTQGKRKSLPNSRIMIHQPLGGAAGQAADIEIQAKEILFTKRLLNRYMAEYTDQPVDKI 234
            G   +Q+DV+SRLLKDRILLLG EV DEVGNVLVAQ+LYLAN+DPE DITLYINSPGGSVSAG+AIYDT+QFIPCDV+TVCFGMAASMGAFLLGAG +GKRKSLPN+RIMIHQPLGGA GQAADIEIQAKEILFTK ++N YMAEYT QP DK+
Sbjct:   71 GSNGEQIDVVSRLLKDRILLLGSEVNDEVGNVLVAQMLYLANEDPEADITLYINSPGGSVSAGMAIYDTMQFIPCDVSTVCFGMAASMGAFLLGAGAKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFTKAVINTYMAEYTGQPADKL 224

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BLAST of mRNA_S-ischiensis_contig82.19904.1 vs. uniprot
Match: A0A7S2H3E4_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H3E4_9STRA)

HSP 1 Score: 265 bits (676), Expect = 8.870e-85
Identity = 133/157 (84.71%), Postives = 144/157 (91.72%), Query Frame = 0

Query:   79 TVGEGKDQMDVISRLLKDRILLLGQEVTDEVGNVLVAQLLYLANDDPEKDITLYINSPGGSVSAGLAIYDTLQFIPCDVATVCFGMAASMGAFLLGAGTQGKRKSLPNSRIMIHQPLGGAAGQAADIEIQAKEILFTKRLLNRYMAEYTDQPVDKIE 235
            TV     Q+DVISRLLKDRILLLG +V DEV NVLVAQLLYLAN+DPEKDITLYINSPGGSVSAGLAIYDT+QFIPCDV TVCFGMAASMGAFLLGAGT GKRKSLPN+RIMIHQPLGGA GQAADIEIQAKEILFTK +LN++MA+Y DQPV+KI+
Sbjct:   83 TVEGQSGQVDVISRLLKDRILLLGTDVNDEVANVLVAQLLYLANEDPEKDITLYINSPGGSVSAGLAIYDTMQFIPCDVQTVCFGMAASMGAFLLGAGTPGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFTKAVLNKFMADYCDQPVEKIQ 239

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BLAST of mRNA_S-ischiensis_contig82.19904.1 vs. uniprot
Match: A0A7S0G7S0_9STRA (ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G7S0_9STRA)

HSP 1 Score: 261 bits (667), Expect = 1.440e-84
Identity = 129/156 (82.69%), Postives = 145/156 (92.95%), Query Frame = 0

Query:   80 VGEGKDQMDVISRLLKDRILLLGQEVTDEVGNVLVAQLLYLANDDPEKDITLYINSPGGSVSAGLAIYDTLQFIPCDVATVCFGMAASMGAFLLGAGTQGKRKSLPNSRIMIHQPLGGAAGQAADIEIQAKEILFTKRLLNRYMAEYTDQPVDKIE 235
            +G+GK QMDVISRLLKDRILLLGQ V DEV NVLVAQLLYLAN+DP+KDITLYINSPGGSVSAG+AIYDT+Q++PCDV+TVCFGMAASMGAFLLGAG +GKR+SLPN+R+MIHQPLGGA GQAADIEIQAKEILF + +LN Y+AEY DQP DKIE
Sbjct:    9 MGDGK-QMDVISRLLKDRILLLGQAVDDEVANVLVAQLLYLANEDPDKDITLYINSPGGSVSAGMAIYDTMQYVPCDVSTVCFGMAASMGAFLLGAGAKGKRRSLPNARVMIHQPLGGAQGQAADIEIQAKEILFIREVLNTYIAEYCDQPKDKIE 163

[Close]

BLAST of mRNA_S-ischiensis_contig82.19904.1 vs. uniprot
Match: A0A7R9VSF9_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VSF9_9STRA)

HSP 1 Score: 261 bits (668), Expect = 5.770e-84
Identity = 127/152 (83.55%), Postives = 142/152 (93.42%), Query Frame = 0

Query:   84 KDQMDVISRLLKDRILLLGQEVTDEVGNVLVAQLLYLANDDPEKDITLYINSPGGSVSAGLAIYDTLQFIPCDVATVCFGMAASMGAFLLGAGTQGKRKSLPNSRIMIHQPLGGAAGQAADIEIQAKEILFTKRLLNRYMAEYTDQPVDKIE 235
            K QMDV+SRLLKDRI+LLGQ V DE+ NVLVAQLLYLAN+DP+KDITLYINSPGGSVSAG+AIYDT+Q++PCDV+TVCFGMAASMGAFLLGAG QGKRK+LPN+RIMIHQPLGGA GQAADIEIQAKEILF + +LN Y+AEYTDQP DKIE
Sbjct:   62 KGQMDVVSRLLKDRIILLGQGVDDEIANVLVAQLLYLANEDPKKDITLYINSPGGSVSAGMAIYDTMQYVPCDVSTVCFGMAASMGAFLLGAGAQGKRKALPNARIMIHQPLGGAQGQAADIEIQAKEILFIREVLNTYIAEYTDQPKDKIE 213

The following BLAST results are available for this feature:

BLAST of mRNA_S-ischiensis_contig82.19904.1 vs. uniprot

BLAST of mRNA_S-ischiensis_contig82.19904.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G5V8_ECTSI	4.560e-96	93.63	ATP-dependent Clp protease proteolytic subunit n=2...	[more]
A0A836C9E3_9STRA	2.660e-94	91.08	ATP-dependent Clp protease proteolytic subunit n=1...	[more]
A0A7S2SET8_9STRA	6.520e-88	85.90	ATP-dependent Clp protease proteolytic subunit (Fr...	[more]
A0A7S2JVK3_9STRA	7.550e-86	85.90	ATP-dependent Clp protease proteolytic subunit n=1...	[more]
A0A1Z5K0G9_FISSO	1.140e-85	84.71	ATP-dependent Clp protease proteolytic subunit n=2...	[more]
B8BRT2_THAPS	1.620e-85	85.35	ATP-dependent Clp protease proteolytic subunit n=2...	[more]
A0A8J2T3N8_9STRA	7.700e-85	83.77	ATP-dependent Clp protease proteolytic subunit n=1...	[more]
A0A7S2H3E4_9STRA	8.870e-85	84.71	ATP-dependent Clp protease proteolytic subunit n=1...	[more]
A0A7S0G7S0_9STRA	1.440e-84	82.69	ATP-dependent Clp protease proteolytic subunit (Fr...	[more]
A0A7R9VSF9_9STRA	5.770e-84	83.55	ATP-dependent Clp protease proteolytic subunit n=1...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 88..103 score: 49.84 coord: 128..148 score: 68.69 coord: 159..176 score: 64.58 coord: 180..199 score: 61.62
IPR001907	ATP-dependent Clp protease proteolytic subunit	HAMAP	MF_00444	ClpP	coord: 65..262 score: 32.551
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 83..237 e-value: 8.9E-63 score: 211.5
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 73..238
None	No IPR available	GENE3D	3.90.226.10		coord: 70..244 e-value: 1.9E-59 score: 202.7
None	No IPR available	PANTHER	PTHR10381:SF11	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT, MITOCHONDRIAL	coord: 73..238
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..294
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..19 score: 0.654
None	No IPR available	TMHMM	TMhelix		coord: 7..29
IPR033135	ClpP, histidine active site	PROSITE	PS00382	CLP_PROTEASE_HIS	coord: 181..194
IPR018215	ClpP, Ser active site	PROSITE	PS00381	CLP_PROTEASE_SER	coord: 159..170
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 85..235

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-ischiensis_contig82	contig	S-ischiensis_contig82:54903..63453 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Schizocladia ischiensis KU_0333	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-ischiensis_contig82.19904.1	mRNA_S-ischiensis_contig82.19904.1	Schizocladia ischiensis KU_0333	mRNA	S-ischiensis_contig82 50130..63587 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-ischiensis_contig82.19904.1 ID=prot_S-ischiensis_contig82.19904.1|Name=mRNA_S-ischiensis_contig82.19904.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=295bp
MQLLYTTAVCAALVGPSLAFLAPAPLAGGPRLLGRRSPTMSLWAPTGGLY
MPGDPQPEPQPDPNQPPPPPKRTPVPMPTVGEGKDQMDVISRLLKDRILL
LGQEVTDEVGNVLVAQLLYLANDDPEKDITLYINSPGGSVSAGLAIYDTL
QFIPCDVATVCFGMAASMGAFLLGAGTQGKRKSLPNSRIMIHQPLGGAAG
QAADIEIQAKEILFTKRLLNRYMAEYTDQPVDKIEVRIQYTSHWRRYSTC
CKPFPCMCAVLPVHTCTVRANIHHLLLHRSGGVPIVLMHAPPGC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001907	ClpP
IPR023562	ClpP/TepA
IPR033135	ClpP_His_AS
IPR018215	ClpP_Ser_AS
IPR029045	ClpP/crotonase-like_dom_sf