prot_S-ischiensis_contig81.19897.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig81.19897.1
Unique Nameprot_S-ischiensis_contig81.19897.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length179
Homology
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BLAST of mRNA_S-ischiensis_contig81.19897.1 vs. uniprot
Match: D7FNA6_ECTSI (Similar to titin isoform N2-B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNA6_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 2.090e-30
Identity = 74/160 (46.25%), Postives = 93/160 (58.13%), Query Frame = 0 
Query:   20 WEMATLRDGTGTGDGDCRAEYLAPVGRATVSAAAXXXXXXXXXAGDYGYYSSDGGDEYAFLVTGLEPGRAYRARVAAENSAARSPWAHAGFPGRPKALAPVQAPELPRNVTVQAGYYEGRLRVGLGYPYDTNVDGSGGARLEGFRVEVGRRVPEVQAVAV 179
            +E+ TLRDGT   +  C+A  L PV    VSA+A          G +G+           LV GL PG +YRARVAA NS ARSPW+  G+PGRP   +P   P++PRNVTV  G   G   VG+G P   +V G+ G  L+GFRVEV +RV E+Q VAV
Sbjct: 9739 FEVKTLRDGTTATESACQARNLLPVQSDAVSASAAEGAGKTAR-GQFGH-----------LVEGLAPGSSYRARVAAVNSVARSPWSFLGYPGRPMTFSPTAEPKIPRNVTVTPGINPGNFHVGIGLPVGIDVTGAEGLPLQGFRVEVAKRVNEMQMVAV 9886
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BLAST of mRNA_S-ischiensis_contig81.19897.1 vs. uniprot
Match: A0A6H5JYH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYH1_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 3.360e-29
Identity = 73/160 (45.62%), Postives = 93/160 (58.13%), Query Frame = 0 
Query:   20 WEMATLRDGTGTGDGDCRAEYLAPVGRATVSAAAXXXXXXXXXAGDYGYYSSDGGDEYAFLVTGLEPGRAYRARVAAENSAARSPWAHAGFPGRPKALAPVQAPELPRNVTVQAGYYEGRLRVGLGYPYDTNVDGSGGARLEGFRVEVGRRVPEVQAVAV 179
            +E+ TLRDGT   +  CRA  L  +    VSA+A          G +G+           LV GL PG +YRARVAA NS +RSPW+  G+PGRP   +P   P++PRNVTV  G   G   VG+G P  T+V G+ G  L+GFRVEV +RV E+Q VAV
Sbjct: 2264 FEVKTLRDGTTATELACRARNLLAMRSDAVSASAAKGAGETAR-GQFGH-----------LVEGLAPGSSYRARVAAVNSVSRSPWSFLGYPGRPMTFSPTAEPKIPRNVTVTPGTNPGEFHVGIGLPVGTDVTGAEGLPLQGFRVEVAKRVNEMQMVAV 2411
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig81.19897.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNA6_ECTSI2.090e-3046.25Similar to titin isoform N2-B n=1 Tax=Ectocarpus s... [more]
A0A6H5JYH1_9PHAE3.360e-2945.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 49..137
e-value: 6.9E-7
score: 31.3
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 69..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig81contigS-ischiensis_contig81:619901..620521 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig81.19897.1mRNA_S-ischiensis_contig81.19897.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig81 619901..622024 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig81.19897.1 ID=prot_S-ischiensis_contig81.19897.1|Name=mRNA_S-ischiensis_contig81.19897.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=179bp
MTVEPCDWAAAATEAGVRQWEMATLRDGTGTGDGDCRAEYLAPVGRATVS
AAAAAAAAAAAEAGDYGYYSSDGGDEYAFLVTGLEPGRAYRARVAAENSA
ARSPWAHAGFPGRPKALAPVQAPELPRNVTVQAGYYEGRLRVGLGYPYDT
NVDGSGGARLEGFRVEVGRRVPEVQAVAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR036116FN3_sf