prot_S-ischiensis_contig81.19888.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-ischiensis_contig81.19888.1
Unique Name	prot_S-ischiensis_contig81.19888.1
Type	polypeptide
Organism	Schizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length	216

Homology

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BLAST of mRNA_S-ischiensis_contig81.19888.1 vs. uniprot
Match: A0A2V0NRH5_9CHLO (Secondary thiamine-phosphate synthase enzyme n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NRH5_9CHLO)

HSP 1 Score: 227 bits (578), Expect = 3.420e-72
Identity = 108/164 (65.85%), Postives = 130/164 (79.27%), Query Frame = 0

Query:   45 AAPVAATGGMIIKYHELKLETDPGISIHDITERVAGLVRESGVAEGFVNVVSRHTTTAVTMNEAEGRLMDDLRQFLLGVAPPGKPYLHNDLHLRSAPAGWPGGDEAWRRQEPLNAHSHLLSMMLGNSETVPVTGGALARGIWQSVLLVDLDGPRSRRVGVQVVG 208
            A+  AAT   +  Y E++L+T PGIS+H+I  ++   V   GVAEGFVNV+SRHTTTAV +NE E RL+DD+RQFL  +APP  PYLHNDLHLR AP GWPGG EAW +QEP NAHSHLLS+MLGNSETVP++GG L  G+WQSV+LV+LDGPR R VGVQ+VG
Sbjct:   35 ASQQAATAAPVFHYTEIELQTGPGISVHNIMPQLRAEVARLGVAEGFVNVLSRHTTTAVCINEYETRLLDDIRQFLRRLAPPTDPYLHNDLHLREAPEGWPGGWEAWAQQEPENAHSHLLSLMLGNSETVPISGGELKTGVWQSVMLVELDGPRKRSVGVQIVG 198

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BLAST of mRNA_S-ischiensis_contig81.19888.1 vs. uniprot
Match: A0A7J7PPP1_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PPP1_9CHLO)

HSP 1 Score: 221 bits (562), Expect = 1.080e-69
Identity = 106/166 (63.86%), Postives = 128/166 (77.11%), Query Frame = 0

Query:   43 TSAAPVAATGGMIIKYHELKLETDPGISIHDITERVAGLVRESGVAEGFVNVVSRHTTTAVTMNEAEGRLMDDLRQFLLGVAPPGKPYLHNDLHLRSAPAGWPGGDEAWRRQEPLNAHSHLLSMMLGNSETVPVTGGALARGIWQSVLLVDLDGPRSRRVGVQVVG 208
            T+AAP+      +  Y ++++ET PGI++ DIT ++   V+E GVAEG VNV+SRHTTTAV +NE E RL+DD+RQFL  +APP   YLHNDLHLR APA WPGG EAW  QEP NAHSHLLSM+LGNSETVPV+ G L  G WQSV+LV+LDGPR R VG+QVVG
Sbjct:   28 TAAAPITTASAHVFDYTQIEIETKPGIALFDITPQIRQRVQELGVAEGCVNVLSRHTTTAVAINEYETRLLDDIRQFLRKLAPPSGAYLHNDLHLREAPADWPGGWEAWAAQEPENAHSHLLSMVLGNSETVPVSNGQLCIGTWQSVMLVELDGPRKRTVGIQVVG 193

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BLAST of mRNA_S-ischiensis_contig81.19888.1 vs. uniprot
Match: A0A7S3R990_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3R990_DUNTE)

HSP 1 Score: 220 bits (561), Expect = 2.180e-69
Identity = 104/169 (61.54%), Postives = 131/169 (77.51%), Query Frame = 0

Query:   40 RMTTSAAPVAATGGMIIKYHELKLETDPGISIHDITERVAGLVRESGVAEGFVNVVSRHTTTAVTMNEAEGRLMDDLRQFLLGVAPPGKPYLHNDLHLRSAPAGWPGGDEAWRRQEPLNAHSHLLSMMLGNSETVPVTGGALARGIWQSVLLVDLDGPRSRRVGVQVVG 208
            R+T+ A+ V A+G  I  Y ++  ET PGI  H+IT+ +   + ++G+ EG V V+SRHTTTA+ +NE E RL DD+RQFL  +APPG+PYLHNDLHLR AP  WPGG EAW +QEP NAHSHLLSMMLGNSE++PVTGG LA G+WQSVL+V+LDGPR R VG Q++G
Sbjct:   54 RVTSKASSVQASGLPIYSYCQVAFETKPGIDFHNITQCIQAEIEKTGLQEGVVTVISRHTTTAIAINEDELRLRDDIRQFLRRLAPPGEPYLHNDLHLREAPKDWPGGWEAWAKQEPENAHSHLLSMMLGNSESIPVTGGKLAIGVWQSVLVVELDGPRKRTVGFQLMG 222

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BLAST of mRNA_S-ischiensis_contig81.19888.1 vs. uniprot
Match: A0A7S0IFL0_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IFL0_MICPS)

HSP 1 Score: 220 bits (560), Expect = 5.490e-69
Identity = 105/170 (61.76%), Postives = 130/170 (76.47%), Query Frame = 0

Query:   46 APVAATGGMIIKYHELKLETDPGISIHDITERVAGLVRESGVAEGFVNVVSRHTTTAVTMNEAEGRLMDDLRQFLLGVAPPGKPYLHNDLHLRSAPAGWPGGDEAWRRQEPLNAHSHLLSMMLGNSETVPVTGGALARGIWQSVLLVDLDGPRSRRVGVQVVGAPLDDGP 215
            AP+ A+   + +Y  L L+T  GIS+HDIT +V   +RESGV  G VNV+SRHTTTAVT+NEAEGRLMDD+RQ++L +APPG PYLHND+HLR  P  WPGG++AWR QEP NAHSHLLS+++GN+  VPV  G LA G WQS++LV+LDGPR R VGVQV G  +   P
Sbjct:   27 APIRAS---VFEYTRLALDTSLGISLHDITPQVRRAIRESGVTNGTVNVLSRHTTTAVTINEAEGRLMDDIRQYMLKLAPPGDPYLHNDIHLRDGPPDWPGGNDAWRAQEPRNAHSHLLSILIGNTLAVPVVDGELAIGTWQSLMLVELDGPRKRTVGVQVCGTRVGGEP 193

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BLAST of mRNA_S-ischiensis_contig81.19888.1 vs. uniprot
Match: C1E0X2_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E0X2_MICCC)

HSP 1 Score: 219 bits (557), Expect = 1.030e-68
Identity = 101/154 (65.58%), Postives = 124/154 (80.52%), Query Frame = 0

Query:   55 IIKYHELKLETDPGISIHDITERVAGLVRESGVAEGFVNVVSRHTTTAVTMNEAEGRLMDDLRQFLLGVAPPGKPYLHNDLHLRSAPAGWPGGDEAWRRQEPLNAHSHLLSMMLGNSETVPVTGGALARGIWQSVLLVDLDGPRSRRVGVQVVG 208
            + +Y +L L+T  GIS+HDIT +V   +RESGV  G VNV+SRHTTTAVT+NEAEGRLMDD+RQ++L +APPG PYLHND+HLR  P  WPGG++AWR QEP NAHSHLLS+++GN+  VPV  G LA G WQS++LV+LDGPR R VGVQV G
Sbjct:   18 VFEYTQLSLDTSLGISLHDITPQVRRAIRESGVTNGTVNVLSRHTTTAVTINEAEGRLMDDIRQYMLKLAPPGDPYLHNDIHLRDGPPDWPGGNDAWRAQEPRNAHSHLLSILIGNTLAVPVVDGELAIGTWQSLMLVELDGPRKRTVGVQVCG 171

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BLAST of mRNA_S-ischiensis_contig81.19888.1 vs. uniprot
Match: A0A383WEC1_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WEC1_TETOB)

HSP 1 Score: 217 bits (552), Expect = 2.640e-68
Identity = 103/166 (62.05%), Postives = 127/166 (76.51%), Query Frame = 0

Query:   43 TSAAPVAATGGMIIKYHELKLETDPGISIHDITERVAGLVRESGVAEGFVNVVSRHTTTAVTMNEAEGRLMDDLRQFLLGVAPPGKPYLHNDLHLRSAPAGWPGGDEAWRRQEPLNAHSHLLSMMLGNSETVPVTGGALARGIWQSVLLVDLDGPRSRRVGVQVVG 208
            ++A P  +    +  Y ++++ET PGI++ DIT ++   V++ GV EGFVNV+SRHTTTAV +NE E RL+DD+RQFL  +AP   PYLHNDLHLR APA WPGG EAW  QEP NAHSHLLSM+LGNSETVPV+ G L  G WQSV+LV+LDGPR R VG+QVVG
Sbjct:   28 SAAVPATSASTQVFDYTQIEIETKPGIALFDITPQIRQRVQQLGVTEGFVNVLSRHTTTAVAINEYETRLLDDVRQFLRKLAPASDPYLHNDLHLREAPADWPGGWEAWAAQEPENAHSHLLSMLLGNSETVPVSKGQLCIGTWQSVMLVELDGPRKRTVGIQVVG 193

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BLAST of mRNA_S-ischiensis_contig81.19888.1 vs. uniprot
Match: A0A7R9TEU2_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TEU2_MICPS)

HSP 1 Score: 216 bits (551), Expect = 1.670e-66
Identity = 104/165 (63.03%), Postives = 125/165 (75.76%), Query Frame = 0

Query:   48 VAATGGMIIKYHELKLETDPGISIHDITERVAGLVRESGVAEGFVNVVSRHTTTAVTMNEAEGRLMDDLRQFLLGVAPPGKPYLHNDLHLRSAPAGWPGGDEAWRRQEPLNAHSHLLSMMLGNSETVPVTGGALARGIWQSVLLVDLDGPRSRRVGVQVVGAPLD 212
            VAA    +  Y  L+  T  GI + D+T  V   V+ +G+  G VNV+SRHTTTAVT+NEAEGRLMDD+RQ+L  +APPG PYLHNDLHLRS P  WPGGD AWR QEP NAHSHLLSM++GNSET+PV  G LA G WQSV+LV+LDGPR+R +GVQVVG  ++
Sbjct:  107 VAAHDDTVFDYARLEYATLRGIQLIDVTADVRARVKAAGIENGVVNVLSRHTTTAVTINEAEGRLMDDVRQYLTRLAPPGDPYLHNDLHLRSGPPDWPGGDAAWRAQEPENAHSHLLSMLIGNSETIPVVDGELALGTWQSVMLVELDGPRTRTLGVQVVGVGVE 271

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BLAST of mRNA_S-ischiensis_contig81.19888.1 vs. uniprot
Match: A0A7S0RDX2_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RDX2_9CHLO)

HSP 1 Score: 211 bits (537), Expect = 6.250e-66
Identity = 106/181 (58.56%), Postives = 129/181 (71.27%), Query Frame = 0

Query:   34 STAQALRMTTSAAPVAATGGMIIKYHELKLETDPGISIHDITERVAGLVRESGVAEGFVNVVSRHTTTAVTMNEAEGRLMDDLRQFLLGVAPPGKPYLHNDLHLRSAPAGWPGGDEAWRRQEPLNAHSHLLSMMLGNSETVPVTGGALARGIWQSVLLVDLDGPRSRRVGVQVVGAPLDDG 214
            S  QA  +   +  V ++ G +  Y  L ++T  G+++ DIT  +   +   G+ EGFVNV+SRHTTTAVT+NE E RLMDD+RQ+L  +APP  PYLHNDLHLR AP GWPGG  AW +QEP NAHSHLLSMMLGN+ TVPV+GG LA G WQSVLLV+LDGPR R VGVQ+VG     G
Sbjct:   21 SPVQAHAVPGLSGSVLSSPGTVFHYKTLHVDTAKGVNLVDITPSIREEIAAIGLQEGFVNVLSRHTTTAVTINENEARLMDDVRQWLRRLAPPSDPYLHNDLHLREAPQGWPGGHAAWVKQEPENAHSHLLSMMLGNTLTVPVSGGKLALGTWQSVLLVELDGPRPRTVGVQLVGHAATPG 201

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BLAST of mRNA_S-ischiensis_contig81.19888.1 vs. uniprot
Match: A0A835VX69_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835VX69_CHLIN)

HSP 1 Score: 212 bits (540), Expect = 1.060e-65
Identity = 108/179 (60.34%), Postives = 131/179 (73.18%), Query Frame = 0

Query:   31 PGGSTAQALRMTTSAAPVAATGGMIIKYHELKLE-TDPGISIHDITERVAGLVRESGVAEGFVNVVSRHTTTAVTMNEAEGRLMDDLRQFLLGVAPPGKPYLHNDLHLRSAPAGWPGGDEAWRRQEPLNAHSHLLSMMLGNSETVPVTGGALARGIWQSVLLVDLDGPRSRRVGVQVVG 208
            PG ST   +  +  +A  AAT  +I  YH+L++  T PGI++ D+T ++  LV +SG+ EG VNV+SRHTTTAVT+NE E RLMDD+RQFL  +AP   PYLHNDLHLR AP  WPGG  AW  QEP NAHSHLLSM LGN+  +PV+GG LA G WQSVLLV+LDGPR R VGVQ+ G
Sbjct:   62 PGSSTEVRISPSQPSAVSAATHHLIFAYHQLEVSATPPGIALVDVTPQIRELVSQSGLVEGTVNVLSRHTTTAVTINENETRLMDDVRQFLSKLAPASAPYLHNDLHLRPAPENWPGGWAAWADQEPQNAHSHLLSMALGNTLAIPVSGGKLALGTWQSVLLVELDGPRPRTVGVQLTG 240

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BLAST of mRNA_S-ischiensis_contig81.19888.1 vs. uniprot
Match: A0A835WTZ9_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WTZ9_9CHLO)

HSP 1 Score: 211 bits (536), Expect = 3.660e-65
Identity = 111/189 (58.73%), Postives = 140/189 (74.07%), Query Frame = 0

Query:   24 AGIMCRRPGGSTAQALRMTTSAAPV--AATGGMII-KYHELKLE-TDPGISIHDITERVAGLVRESGVAEGFVNVVSRHTTTAVTMNEAEGRLMDDLRQFLLGVAPPGKPYLHNDLHLRSAPAGWPGGDEAWRRQEPLNAHSHLLSMMLGNSETVPVTGGALARGIWQSVLLVDLDGPRSRRVGVQVVG 208
            AG +   P G++ + +R++ S AP   AATG  +I  YH+L++  T PGI++ D+T ++  LV ++G+ EG VNV+SRHTTTAVT+NE E RLMDD+RQFL  +AP   PYLHNDLHLR AP  WPGG  AW  QEP NAHSHLLSM+LGN+  +PV+GG LA G WQSVLLV+LDGPR R VGVQ+ G
Sbjct:   51 AGALPHEPPGTSTE-VRISPSQAPAVSAATGHQLIFSYHQLEVPATPPGIALVDVTPQIRELVAQAGLVEGSVNVLSRHTTTAVTINENEARLMDDVRQFLSQLAPASAPYLHNDLHLRPAPENWPGGWAAWAGQEPRNAHSHLLSMVLGNTLALPVSGGRLALGTWQSVLLVELDGPRPRTVGVQLTG 238

The following BLAST results are available for this feature:

BLAST of mRNA_S-ischiensis_contig81.19888.1 vs. uniprot

BLAST of mRNA_S-ischiensis_contig81.19888.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2V0NRH5_9CHLO	3.420e-72	65.85	Secondary thiamine-phosphate synthase enzyme n=1 T...	[more]
A0A7J7PPP1_9CHLO	1.080e-69	63.86	Uncharacterized protein n=1 Tax=Scenedesmus sp. NR...	[more]
A0A7S3R990_DUNTE	2.180e-69	61.54	Hypothetical protein n=1 Tax=Dunaliella tertiolect...	[more]
A0A7S0IFL0_MICPS	5.490e-69	61.76	Hypothetical protein n=1 Tax=Micromonas pusilla Ta...	[more]
C1E0X2_MICCC	1.030e-68	65.58	Uncharacterized protein n=1 Tax=Micromonas commoda...	[more]
A0A383WEC1_TETOB	2.640e-68	62.05	Uncharacterized protein n=1 Tax=Tetradesmus obliqu...	[more]
A0A7R9TEU2_MICPS	1.670e-66	63.03	Hypothetical protein n=1 Tax=Micromonas pusilla Ta...	[more]
A0A7S0RDX2_9CHLO	6.250e-66	58.56	Hypothetical protein n=1 Tax=Chlamydomonas leiostr...	[more]
A0A835VX69_CHLIN	1.060e-65	60.34	Uncharacterized protein n=1 Tax=Chlamydomonas ince...	[more]
A0A835WTZ9_9CHLO	3.660e-65	58.73	Uncharacterized protein n=1 Tax=Chlamydomonas schl...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035917	YjbQ-like superfamily	GENE3D	2.60.120.460		coord: 49..209 e-value: 6.7E-41 score: 141.1
IPR035917	YjbQ-like superfamily	SUPERFAMILY	111038	YjbQ-like	coord: 54..208
IPR001602	Uncharacterised protein family UPF0047	PFAM	PF01894	UPF0047	coord: 73..206 e-value: 1.1E-34 score: 119.1
IPR001602	Uncharacterised protein family UPF0047	PANTHER	PTHR30615	UNCHARACTERIZED PROTEIN YJBQ-RELATED	coord: 29..209
None	No IPR available	PANTHER	PTHR30615:SF13		coord: 29..209
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 14..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 5..13
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 21..215
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..4
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..16 score: 0.792
None	No IPR available	TMHMM	TMhelix		coord: 5..27

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-ischiensis_contig81	contig	S-ischiensis_contig81:396406..399686 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Schizocladia ischiensis KU_0333	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-ischiensis_contig81.19888.1	mRNA_S-ischiensis_contig81.19888.1	Schizocladia ischiensis KU_0333	mRNA	S-ischiensis_contig81 394398..399721 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-ischiensis_contig81.19888.1 ID=prot_S-ischiensis_contig81.19888.1|Name=mRNA_S-ischiensis_contig81.19888.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=216bp
MGMMLALLCLAGFAPATVNCFMHAGIMCRRPGGSTAQALRMTTSAAPVAA
TGGMIIKYHELKLETDPGISIHDITERVAGLVRESGVAEGFVNVVSRHTT
TAVTMNEAEGRLMDDLRQFLLGVAPPGKPYLHNDLHLRSAPAGWPGGDEA
WRRQEPLNAHSHLLSMMLGNSETVPVTGGALARGIWQSVLLVDLDGPRSR
RVGVQVVGAPLDDGP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR035917	YjbQ-like_sf
IPR001602	UPF0047