prot_S-ischiensis_contig81.19855.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig81.19855.1
Unique Nameprot_S-ischiensis_contig81.19855.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length196
Homology
BLAST of mRNA_S-ischiensis_contig81.19855.1 vs. uniprot
Match: H3G6C9_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G6C9_PHYRM)

HSP 1 Score: 140 bits (354), Expect = 6.390e-38
Identity = 80/199 (40.20%), Postives = 113/199 (56.78%), Query Frame = 0
Query:    3 IYVDDVLLTGANPNSVETLLKSMSARFDTQDLGTAAYLLGMEIKHSRDLRTLHLCQKKYADDILHRFGMDRFNSVPTPGDSDNFHPVGQTLLEPTD-----HGIYREIIGSLLYLCRLTRPDISYAVMQLSRVVSKPYAIHMAAAKRLPGYLKGTTT--LCIKYLGSIRPPTTPVLEGYCDADYGGDLATRKSCTGYTY 194
            +YVDDVL+TG++P  +      +  RF+  D G  A++LG+E+    D  ++ +CQ++Y DDIL RF MD   +V +P D         T L P+D     +  +RE +G+L+YL   TRPDI+YAV  +SR +  P   H  A KR+  YL+GT T  +C K      P       GY DAD+ GDLA RKS +GYT+
Sbjct:   41 VYVDDVLITGSSPELIARTKTDLKTRFEMTDSGKCAFVLGIELVDGPD-GSVTMCQRRYVDDILKRFAMDECKAVVSPVDM-------STRLVPSDAATKVNAPFREAVGALMYLMTATRPDIAYAVGYVSRFMENPQEEHWVAVKRIFRYLQGTKTHDICFK------PGDKIDFRGYSDADWAGDLADRKSTSGYTF 225          
BLAST of mRNA_S-ischiensis_contig81.19855.1 vs. uniprot
Match: H3H5N2_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H5N2_PHYRM)

HSP 1 Score: 137 bits (345), Expect = 1.760e-36
Identity = 78/199 (39.20%), Postives = 112/199 (56.28%), Query Frame = 0
Query:    3 IYVDDVLLTGANPNSVETLLKSMSARFDTQDLGTAAYLLGMEIKHSRDLRTLHLCQKKYADDILHRFGMDRFNSVPTPGDSDNFHPVGQTLLEPTD-----HGIYREIIGSLLYLCRLTRPDISYAVMQLSRVVSKPYAIHMAAAKRLPGYLKGTTT--LCIKYLGSIRPPTTPVLEGYCDADYGGDLATRKSCTGYTY 194
            +YVDDVL+TG++P  +      +  RF+  D G  A++LG+E+    D  ++ +CQ++Y DDIL RF MD   +V +P D         T L P+D     +  +RE +G+L++L   TRPDI+YAV  +SR +  P   H  A KR+  YL+GT T  +C K      P       GY DAD+ GDLA RKS +GY +
Sbjct:   60 VYVDDVLITGSSPELISRTKTDLKTRFEMTDSGKCAFVLGIELVDGPD-GSVTMCQRRYVDDILKRFAMDECKAVVSPVDM-------STRLVPSDAATKVNAPFREAVGALMHLMTATRPDIAYAVGYVSRFMENPQEEHWVAVKRIFRYLQGTKTHGICFK------PGDKIDFRGYSDADWAGDLADRKSTSGYAF 244          
BLAST of mRNA_S-ischiensis_contig81.19855.1 vs. uniprot
Match: A0A6H5JXA8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXA8_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 1.400e-35
Identity = 74/189 (39.15%), Postives = 112/189 (59.26%), Query Frame = 0
Query:    3 IYVDDVLLTGANPNSVETLLKSMSARFDTQDLGTAAYLLGMEIKHSRDLRTLHLCQKKYADDILHRFGMDRFNSVPTPGDSDNFHPVGQTLLEPTDHGIYREIIGSLLYLCRLTRPDISYAVMQLSRVVSKPYAIHMAAAKRLPGYLKGTTTLCIKYLGSIRPPTTPVLEGYCDADYGGDLATRKSCTG 191
            +YVDD+LLTGA    V T+++ M  RF+T DLG A ++LGM I+ + +  T+ L Q+ Y   +L +FGM    +  TP + +      +  L P    ++R   GS+LY+ R +RPDIS++V+ L++ ++KP    +A  KRL  YLKGTT+ CI Y    +     +L  + D+D+ GDL  RKS TG
Sbjct:  629 VYVDDILLTGAKEELVTTIIEQMKERFETVDLGEAKFILGMAIQRNLEAGTILLTQEAYTKAVLAKFGMADVRATATPAEKEPVTTKEENALSPEQTTMFRSATGSVLYISRGSRPDISHSVLVLTKSMAKPGPKALAKLKRLMHYLKGTTSFCITYRKDAQGGD--ILTAHVDSDFAGDLDDRKSTTG 815          
BLAST of mRNA_S-ischiensis_contig81.19855.1 vs. uniprot
Match: H3GB53_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=6 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB53_PHYRM)

HSP 1 Score: 137 bits (346), Expect = 1.500e-35
Identity = 79/199 (39.70%), Postives = 113/199 (56.78%), Query Frame = 0
Query:    3 IYVDDVLLTGANPNSVETLLKSMSARFDTQDLGTAAYLLGMEIKHSRDLRTLHLCQKKYADDILHRFGMDRFNSVPTPGDSDNFHPVGQTLLEPTD-----HGIYREIIGSLLYLCRLTRPDISYAVMQLSRVVSKPYAIHMAAAKRLPGYLKGTTT--LCIKYLGSIRPPTTPVLEGYCDADYGGDLATRKSCTGYTY 194
            +YVDDVL+TG++P  +      +  RF+  D G  A++LG+E+    D  ++ +CQ++Y DDIL RF MD   +V +P D         T L P+D     +  +RE +G+L++L   TRPDI+YAV  +SR +  P   H  A KR+  YL+GT T  +C K      P       GY DAD+ GDLA RKS +GYT+
Sbjct:   74 VYVDDVLITGSSPELISRTKTDLKTRFEMTDSGKCAFVLGIELVDGPD-GSVTMCQRRYVDDILKRFAMDECKAVVSPVDM-------STRLVPSDAATKVNAPFREAVGALMHLMTATRPDIAYAVGYVSRFMENPQEEHWVAVKRIFRYLQGTKTHGICFK------PGDKIDFCGYSDADWAGDLADRKSTSGYTF 258          
BLAST of mRNA_S-ischiensis_contig81.19855.1 vs. uniprot
Match: A0A2P6S100_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6S100_ROSCH)

HSP 1 Score: 141 bits (355), Expect = 2.760e-35
Identity = 82/199 (41.21%), Postives = 114/199 (57.29%), Query Frame = 0
Query:    1 MSIYVDDVLLTGANPNSVETLLKSMSARFDTQDLGTAAYLLGMEIKHSRDLRTLHLCQKKYADDILHRFGMDRFNSVPTPGDSDNFHPVGQTLLEP-----TDHGIYREIIGSLLYLCRLTRPDISYAVMQLSRVVSKPYAIHMAAAKRLPGYLKGTTTLCIKYLGSIRPPTTPVLEGYCDADYGGDLATRKSCTGYTY 194
            +S+YVDD++ TG +    E   KSM   FD  DLG   Y LG+E+  +     +++CQKKYA +IL RFGM++ NSV  P         G  L++       D  +Y++I+GSL+YL   TRPD+ Y V  +SR +S P  +HM AAKR+  YLKGT  L + Y    R      LE + D+DY GD+  RKS +GY +
Sbjct:  996 VSLYVDDLIFTGNDEYMFEEFKKSMKDEFDMSDLGMMRYFLGVEVVQNE--AGIYICQKKYASEILERFGMEKANSVRNP------IVPGIKLMKDEGGVKVDATMYKQIVGSLMYLTA-TRPDLMYVVSLISRFMSSPTELHMQAAKRVLRYLKGTINLGVLY----RRNGEEKLEAFTDSDYAGDVDDRKSTSGYIF 1181          
BLAST of mRNA_S-ischiensis_contig81.19855.1 vs. uniprot
Match: A0A6J1DE27_MOMCH (uncharacterized protein LOC111019555 n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1DE27_MOMCH)

HSP 1 Score: 132 bits (333), Expect = 2.830e-35
Identity = 78/196 (39.80%), Postives = 110/196 (56.12%), Query Frame = 0
Query:    1 MSIYVDDVLLTGANPNSVETLLKSMSARFDTQDLGTAAYLLGMEIKHSRDLRTLHLCQKKYADDILHRFGMDRFNSVPTPG-DSDNFHPVGQTLLEPTDHGIYREIIGSLLYLCRLTRPDISYAVMQLSRVVSKPYAIHMAAAKRLPGYLKGTTTLCIKYLGSIRPPTTPVLEGYCDADYGGDLATRKSCTGYTYS 195
            +S+YVDD+L+TG++ N +E   + M   F+  DLG   Y LGMEI+  ++   + LCQKKY  +IL RF M+   SV TP    +      +   +PTD  +YR ++G L+YL   T+PDI Y V  LSR +      HM A KR+  YLKGT +  IKY           L+GY D+D+ G L   KS +GY ++
Sbjct:   31 VSLYVDDLLVTGSDNNQIEVFKQEMMKVFEMVDLGLMHYFLGMEIQQGQN--EVFLCQKKYMREILKRFNMEECKSVNTPMVQKEKLQKDDEE--DPTDENVYRSLVGCLMYLTS-TKPDIMYTVSVLSRFLHCASKNHMVAGKRVLRYLKGTLSFGIKY----NKVENFELQGYSDSDWAGSLDDMKSTSGYCFT 217          
BLAST of mRNA_S-ischiensis_contig81.19855.1 vs. uniprot
Match: A0A6A6KC61_HEVBR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6KC61_HEVBR)

HSP 1 Score: 132 bits (332), Expect = 5.480e-35
Identity = 77/195 (39.49%), Postives = 110/195 (56.41%), Query Frame = 0
Query:    1 MSIYVDDVLLTGANPNSVETLLKSMSARFDTQDLGTAAYLLGMEIKHSRDLRTLHLCQKKYADDILHRFGMDRFNSVPTPGDSDNFHPVGQTLLEPTDHGIYREIIGSLLYLCRLTRPDISYAVMQLSRVVSKPYAIHMAAAKRLPGYLKGTTTLCIKYLGSIRPPTTPVLEGYCDADYGGDLATRKSCTGYTYS 195
            MS+YVDD+L+TG N + +    K M ++F+  DLG   + LG+E+ H  +  T  +CQ+KYA +IL +FGM+  NS+ TP    N     +   E  D GIYR +IG L YL   +RPDI Y    LSR + +P   H  A KR+  Y+KGT  L I +   +       L GY D+D+GG +   KS +G+ +S
Sbjct:   38 MSLYVDDLLITGNNIDLINHFKKEMQSKFEMTDLGKMTFFLGLEV-HQTNQGTF-ICQEKYAREILKKFGMENCNSIDTPTPQ-NEKLSKEDGSEKIDSGIYRSVIGCLFYLTA-SRPDIMYPTSLLSRFMHEPSQNHFKAVKRVLRYVKGTIDLGIWFKSGMEAK----LVGYADSDWGGSIDDMKSTSGFVFS 224          
BLAST of mRNA_S-ischiensis_contig81.19855.1 vs. uniprot
Match: H3H7U1_PHYRM (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7U1_PHYRM)

HSP 1 Score: 139 bits (351), Expect = 8.150e-35
Identity = 79/199 (39.70%), Postives = 113/199 (56.78%), Query Frame = 0
Query:    3 IYVDDVLLTGANPNSVETLLKSMSARFDTQDLGTAAYLLGMEIKHSRDLRTLHLCQKKYADDILHRFGMDRFNSVPTPGDSDNFHPVGQTLLEPTD-----HGIYREIIGSLLYLCRLTRPDISYAVMQLSRVVSKPYAIHMAAAKRLPGYLKGTTT--LCIKYLGSIRPPTTPVLEGYCDADYGGDLATRKSCTGYTY 194
            +YVDDVL+TG++P  +      +  RF+  D G  A++LG+E+    D  ++ +CQ++Y DDIL RF MD   +V +P D         T L P+D     +  +RE +G+L++L   TRPDI+YAV  +SR +  P   H  A KR+  YL+GT T  +C K      P       GY DAD+ GDLA RKS +GYT+
Sbjct:  147 VYVDDVLITGSSPELISRTKTDLKTRFEMTDSGKCAFVLGIELVDGPD-GSVTMCQRRYVDDILKRFAMDECKAVVSPVDM-------STRLVPSDAATKVNAPFREAVGALMHLMTATRPDIAYAVGYVSRFMENPQEEHWVAVKRIFRYLQGTKTHGICFK------PGDKVDFRGYSDADWAGDLADRKSTSGYTF 331          
BLAST of mRNA_S-ischiensis_contig81.19855.1 vs. uniprot
Match: H3H7X3_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7X3_PHYRM)

HSP 1 Score: 139 bits (350), Expect = 8.860e-35
Identity = 79/199 (39.70%), Postives = 113/199 (56.78%), Query Frame = 0
Query:    3 IYVDDVLLTGANPNSVETLLKSMSARFDTQDLGTAAYLLGMEIKHSRDLRTLHLCQKKYADDILHRFGMDRFNSVPTPGDSDNFHPVGQTLLEPTD-----HGIYREIIGSLLYLCRLTRPDISYAVMQLSRVVSKPYAIHMAAAKRLPGYLKGTTT--LCIKYLGSIRPPTTPVLEGYCDADYGGDLATRKSCTGYTY 194
            +YVDDVL+TG++P  +      +  RF+  D G  A++LG+E+    D  ++ +CQ++Y DDIL RF MD   +V +P D         T L P+D     +  +RE +G+L++L   TRPDI+YAV  +SR +  P   H  A KR+  YL+GT T  +C K      P       GY DAD+ GDLA RKS +GYT+
Sbjct:  496 VYVDDVLITGSSPELISRTKTDLKTRFEMTDSGKCAFVLGIELVDGPD-GSVTMCQRRYVDDILKRFAMDECKAVVSPVDM-------STRLVPSDAATKVNAPFREAVGALMHLMTATRPDIAYAVGYVSRFMENPQEEHWVAVKRIFRYLQGTKTHGICFK------PGDKIDFRGYSDADWAGDLADRKSTSGYTF 680          
BLAST of mRNA_S-ischiensis_contig81.19855.1 vs. uniprot
Match: A0A6A3HS94_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Eukaryota TaxID=2759 RepID=A0A6A3HS94_9STRA)

HSP 1 Score: 139 bits (351), Expect = 9.390e-35
Identity = 79/199 (39.70%), Postives = 113/199 (56.78%), Query Frame = 0
Query:    3 IYVDDVLLTGANPNSVETLLKSMSARFDTQDLGTAAYLLGMEIKHSRDLRTLHLCQKKYADDILHRFGMDRFNSVPTPGDSDNFHPVGQTLLEPTD-----HGIYREIIGSLLYLCRLTRPDISYAVMQLSRVVSKPYAIHMAAAKRLPGYLKGTTT--LCIKYLGSIRPPTTPVLEGYCDADYGGDLATRKSCTGYTY 194
            +YVDDVL+TG++P  +      +  RF+  D G  A++LG+E+    D  ++ +CQ++Y DDIL RF MD   +V +P D         T L P+D     +  +RE +G+L++L   TRPDI+YAV  +SR +  P   H  A KR+  YL+GT T  +C K      P       GY DAD+ GDLA RKS +GYT+
Sbjct:  885 VYVDDVLITGSSPELISRTKTDLKTRFEMTDSGKCAFVLGIELVDGPD-GSVTMCQRRYVDDILKRFAMDECKAVVSPVDM-------STRLVPSDAATKVNAPFREAVGALMHLMTATRPDIAYAVGYVSRFMENPQEEHWVAVKRIFRYLQGTKTHGICFK------PGDNIDFRGYSDADWAGDLADRKSTSGYTF 1069          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig81.19855.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
H3G6C9_PHYRM6.390e-3840.20Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H5N2_PHYRM1.760e-3639.20Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JXA8_9PHAE1.400e-3539.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
H3GB53_PHYRM1.500e-3539.70Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2P6S100_ROSCH2.760e-3541.21Putative RNA-directed DNA polymerase n=1 Tax=Rosa ... [more]
A0A6J1DE27_MOMCH2.830e-3539.80uncharacterized protein LOC111019555 n=1 Tax=Momor... [more]
A0A6A6KC61_HEVBR5.480e-3539.49Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H7U1_PHYRM8.150e-3539.70Integrase catalytic domain-containing protein n=1 ... [more]
H3H7X3_PHYRM8.860e-3539.70Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A3HS94_9STRA9.390e-3539.70Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..80
e-value: 5.5E-11
score: 42.6
NoneNo IPR availablePANTHERPTHR11439:SF257coord: 2..188
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig81contigS-ischiensis_contig81:15822..16409 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig81.19855.1mRNA_S-ischiensis_contig81.19855.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig81 15609..16781 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig81.19855.1 ID=prot_S-ischiensis_contig81.19855.1|Name=mRNA_S-ischiensis_contig81.19855.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=196bp
MSIYVDDVLLTGANPNSVETLLKSMSARFDTQDLGTAAYLLGMEIKHSRD
LRTLHLCQKKYADDILHRFGMDRFNSVPTPGDSDNFHPVGQTLLEPTDHG
IYREIIGSLLYLCRLTRPDISYAVMQLSRVVSKPYAIHMAAAKRLPGYLK
GTTTLCIKYLGSIRPPTTPVLEGYCDADYGGDLATRKSCTGYTYS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like