prot_S-ischiensis_contig80.19847.1 (polypeptide) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig80.19847.1 vs. uniprot
Match: A0A2K3MQM8_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MQM8_TRIPR) HSP 1 Score: 243 bits (621), Expect = 4.220e-69 Identity = 138/377 (36.60%), Postives = 220/377 (58.36%), Query Frame = 0
Query: 1 MDKDLQGLWNKGAFSDEPAPPDRKPVKTRYVYKIKHKVVGSVERYKARLVARGFTQQQGVDFFQTFSPVFGLDVMRSVLATAACPGWAIHSLDFTQAYLNASLQEDIWLELPDG-------NIVKANKALYGLKQSALEWYKELRSTILGEGWSSSANDQCLYYRRSEDGRVAVLLTYVNDTAFTGDYGEEIKRMRDTLLSTYEGRDLGVPDQLLGVRITTDETGIILDQLLYTRSIVTEGMGSLDLRITTSPLDPGVDLSARRDDEEELDCKLYPYANILGKLMFLAGMTRPDLASSVRELGCRAASPCTRHWRGLQHVLRYLAGTLDVCIHYAANMDTNDEQVLIGYSDSDWGNDIETRRSVTGYILLYDRSPIA 370
M +L+ L G + PP+ KP+ +++VYKIKHK G++ERYKARLVA+G+ Q +G+DFF TFSPV L +R +LA A+ GW +H LD A+L+ LQE++++ +PDG + K K+LYGLKQ++ +WY++L S ++ EG++ S++D L+ +D A+L+ YV+D G +EI R+++ L + ++ +DLGV LG+ + + GI + Q Y ++ + G L + ++PLDP V L DD + + + Y ++GKL++L TRPD+A + ++L P H++ V+RYL + + + N D LIGYSD+DW ++TRRS TGY S I+
Sbjct: 467 MTSELEALARTGTWKIVDLPPNVKPIGSKWVYKIKHKSDGTIERYKARLVAKGYNQVEGLDFFDTFSPVAKLTTVRMLLAIASIKGWFLHQLDVNNAFLHGDLQENVYMSIPDGVQCSKPNQVCKLLKSLYGLKQASRKWYEKLTSLLVKEGYTQSSSDHSLFTISQQDNFTALLI-YVDDIILAGTSLQEINRIKNILDTHFKIKDLGVVKYFLGLEVAHSKEGISISQRKYCLDLLHDS-GLLGSKPASTPLDPSVKL--HHDDGKPFE-DISMYRRLVGKLLYLTN-TRPDIAFATQQLSQFLHKPTMTHYKAACRVIRYLKHNPGMGLIFKRNADIQ----LIGYSDADWAGCLDTRRSTTGYCFFVGSSLIS 833
BLAST of mRNA_S-ischiensis_contig80.19847.1 vs. uniprot
Match: A0A392N3S7_9FABA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392N3S7_9FABA) HSP 1 Score: 230 bits (587), Expect = 5.770e-69 Identity = 132/374 (35.29%), Postives = 213/374 (56.95%), Query Frame = 0
Query: 4 DLQGLWNKGAFSDEPAPPDRKPVKTRYVYKIKHKVVGSVERYKARLVARGFTQQQGVDFFQTFSPVFGLDVMRSVLATAACPGWAIHSLDFTQAYLNASLQEDIWLELPDG-------NIVKANKALYGLKQSALEWYKELRSTILGEGWSSSANDQCLYYRRSEDGRVAVLLTYVNDTAFTGDYGEEIKRMRDTLLSTYEGRDLGVPDQLLGVRITTDETGIILDQLLYTRSIVTEGMGSLDLRITTSPLDPGVDLSARRDDEEELDCKLYPYANILGKLMFLAGMTRPDLASSVRELGCRAASPCTRHWRGLQHVLRYLAGTLDVCIHYAANMDTNDEQVLIGYSDSDWGNDIETRRSVTGYILLYDRSPIA 370
+L+ L G + PP+ KP+ +++VYKIKHK G+VERYKARLVA+G+ Q +G+DFF TFSPV L +R +L A+ GW +H LD A+L+ L+E++++ +PDG + K K+LYGLKQ++ +WY++L S ++ EG++ S +D L+ +D A+L+ YV+D G +EI+R++ L + ++ +DLGV LG+ + + GI + Q Y ++ + G L + +PLDP + L DD + + + Y ++GKL++L TRP +A + ++L P H++ V+RYL + + N D LIGY D+DW ++TRRS TGY S ++
Sbjct: 1 ELEALARTGTWKIVDLPPNVKPIGSKWVYKIKHKSDGTVERYKARLVAKGYNQVEGLDFFDTFSPVAKLTTVRMLLVVASIKGWFLHQLDVNNAFLHGELKENVYMSIPDGVSSTKPNQVCKLLKSLYGLKQASRKWYEKLTSLLVREGYTQSTSDYSLFTLSQQDNFTALLI-YVDDIILAGTNMQEIERIKGILDNHFKIKDLGVVKYFLGLEVAHSKEGISISQRKYCLDLLNDS-GLLGSKPAPTPLDPSIKL--HHDDGKPFE-DISLYRRLVGKLLYLTN-TRPYIAYATQQLSQFLHKPTMTHYKAACRVIRYLKHNPGRGLVFYRNADIQ----LIGYLDADWAGCLDTRRSTTGYCFFLGSSLVS 364
BLAST of mRNA_S-ischiensis_contig80.19847.1 vs. uniprot
Match: A0A0A9W6P7_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9W6P7_LYGHE) HSP 1 Score: 244 bits (624), Expect = 6.030e-69 Identity = 137/381 (35.96%), Postives = 217/381 (56.96%), Query Frame = 0
Query: 1 MDKDLQGLWNKGAFSDEPAPPDRKPVKTRYVYKIKHKVVGSVERYKARLVARGFTQQQGVDFFQTFSPVFGLDVMRSVLATAACPGWAIHSLDFTQAYLNASLQEDIWLELPDGNIVKAN--------KALYGLKQSALEWYKELRSTILGEGWSSSANDQCLYYRRSEDGRVAVLLTYVNDTAFTGDYGEEIKRMRDTLLSTYEGRDLGVPDQLLGVRITTDETG-IILDQLLYTRSIVTEGMGSLDLRITTSPLDPGVDLSARRDD---EEELDCKLYPYANILGKLMFLAGMTRPDLASSVRELGCRAASPCTRHWRGLQHVLRYLAGTLDVCIHYAANMDTNDEQVLIGYSDSDWGNDIETRRSVTGYILLYDRSPI 369
++++L L N + PP + + ++V+KIK+ GSVERYKARLVA+GFTQ+ GVD+ +T+SPV L +R L A W +H +D AYLN L+E+I++ LP+G I + + K+LYGLKQS WY+ L +L G S ++ C+Y+ +S DG + ++L YV+D E + M+ L +E +DLG + +LG+ + E G + ++Q Y + I+T +D + +SP+DP +LS + +E+ + PY ++GKLM+LA TRPD+A V +LG +++P +HW + VLRYL GT + + T D +I +SDSDW + R+S TG+I+ R+P+
Sbjct: 688 VEEELTSLKNMNVWELTDLPPGKSAIGCKWVFKIKYLADGSVERYKARLVAQGFTQEYGVDYNETYSPVVSLPTIRLFLKLAVENNWLVHQMDVKTAYLNGELKEEIYMRLPEGIITEESEKKVCRLLKSLYGLKQSGRAWYETLERKLLEGGMKKSKSESCIYFEKS-DGVIKIILVYVDDLILISSNLEAMSDMKIMLGRNFEMKDLGNLNYILGIEVKRQEDGSLFMNQWKYLQEIIT-AFHMIDCKSISSPMDPSQELSKSQCPITVQEKNEIANVPYRRLVGKLMYLAQATRPDIAFFVSKLGQFSSNPGKQHWAAAKRVLRYLKGTENYQLKI-----TKDNDQIIAHSDSDWAGSKDDRKSTTGFIIKIGRTPV 1061
BLAST of mRNA_S-ischiensis_contig80.19847.1 vs. uniprot
Match: A0A2K3LMF0_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3LMF0_TRIPR) HSP 1 Score: 234 bits (597), Expect = 4.010e-68 Identity = 134/376 (35.64%), Postives = 211/376 (56.12%), Query Frame = 0
Query: 1 MDKDLQGLWNKGAFSDEPAPPDRKPVKTRYVYKIKHKVVGSVERYKARLVARGFTQQQGVDFFQTFSPVFGLDVMRSVLATAACPGWAIHSLDFTQAYLNASLQEDIWLELPDG-------NIVKANKALYGLKQSALEWYKELRSTILGEGWSSSANDQCLYYRRSEDGRVAVLLTYVNDTAFTGDYGEEIKRMRDTLLSTYEGRDLGVPDQLLGVRITTDETGIILDQLLYTRSIVTEGMGSLDLRITTSPLDPGVDLSARRDDEEELDCKLYPYANILGKLMFLAGMTRPDLASSVRELGCRAASPCTRHWRGLQHVLRYLAGTLDVCIHYAANMDTNDEQVLIGYSDSDWGNDIETRRSVTGYILLYDRSPI 369
M+ +L L + P KP+ ++VYKIK K GS++RYKARLVA+G+ Q +GVDFFQTFSPV + +R+VLA A+ W IH LD A+L+ L+ED++++ P G + K K+LYGL+Q++ +WY++L ++ G++ +D L+ +S +VLL YV+D TG+ +EI + L + +DLG+ LG+ + + GI L Q Y ++TE G+L + ++ P+DP L D+ E + Y ++GKL++L TRPD+A V++L +P + H++ VLRYL G + + N L+G+SD+DWG I++RRS+TGY +S I
Sbjct: 101 MNNELTALAKNNTWIIVDLPDGAKPIGRKWVYKIKRKADGSIDRYKARLVAKGYNQIEGVDFFQTFSPVAKMSTIRTVLAVASIKNWHIHQLDVDNAFLHGDLEEDVYMKAPQGLTGVSANQVCKLKKSLYGLRQASRKWYEKLSQFLITIGYAQMTSDPTLF-TKSTSSDFSVLLVYVDDIVLTGNCMDEIDATKSQLHKAFRIKDLGILKFFLGLEVAHSQQGITLCQRKYCLELLTE-TGTLGCKPSSIPMDPSNRL---HHDDSEPHHDITKYRALVGKLLYLTS-TRPDIAFPVQQLSQFLDAPTSTHFKAAHKVLRYLKGNPGTGLFFPRNSSIQ----LLGFSDADWGGCIDSRRSITGYCFFLGQSLI 466
BLAST of mRNA_S-ischiensis_contig80.19847.1 vs. uniprot
Match: UPI001F4EDB97 (hypothetical protein n=1 Tax=Serratia marcescens TaxID=615 RepID=UPI001F4EDB97) HSP 1 Score: 230 bits (586), Expect = 1.460e-67 Identity = 130/377 (34.48%), Postives = 208/377 (55.17%), Query Frame = 0
Query: 1 MDKDLQGLWNKGAFSDEPAPPDRKPVKTRYVYKIKHKVVGSVERYKARLVARGFTQQQGVDFFQTFSPVFGLDVMRSVLATAACPGWAIHSLDFTQAYLNASLQEDIWLELPDG------NIV-KANKALYGLKQSALEWYKELRSTILGEGWSSSANDQCLYYRRSEDGRVAVLLTYVNDTAFTGDYGEEIKRMRDTLLSTYEGRDLGVPDQLLGVRITTDETGIILDQLLYTRSIVTEGMGSLDLRITTSPLDPGVDLSARRDDEEELDCKLYPYANILGKLMFLAGMTRPDLASSVRELGCRAASPCTRHWRGLQHVLRYLAGTLDVCIHYAANMDTNDEQVLIGYSDSDWGNDIETRRSVTGYILLYDRSPIA 370
MD+++Q L N G ++ P K V +VY +KH G+VER KARLVA+G+TQ+ GVDF +TFSPV L +R +++ A GW +H LD A+LN LQE ++++ P G N+V K+LYGLKQS W+++ + + G++ S D ++ + +G + +LL YV+D TG+ + I ++ L ++ +DLG LG+ + + I + Q Y I++E G L R +P+DP + LSA D D Y ++G+L++L +TRPD+A +V + SP T HW + H++RYL +H+ + L GYSD+DW ++ RRS +GY++ + +PI+
Sbjct: 1 MDEEMQALQNNGTWTVVRLPDGVKTVGCCWVYTVKHNPDGTVERLKARLVAKGYTQEFGVDFAETFSPVAKLTSVRLLISLACTQGWPLHQLDVKNAFLNGDLQETVYMQQPPGYERKGENLVCSLKKSLYGLKQSPRAWFQKFAAVVCSVGFTRSTADHSIFTKTCTEG-IVILLVYVDDIIVTGNDSQGIAAIKHHLSRAFQTKDLGPLRYFLGIEVARKQNDIFISQRKYVLDILSE-TGLLGCRPVETPMDPNIKLSAHTSDPPFTDPGRY--RRLVGRLIYLT-VTRPDIAYAVSRVSQFMQSPTTTHWEAVIHIIRYLKKAPGRGLHFTPG----ESLTLQGYSDADWAGSVDDRRSTSGYLIFFAGNPIS 368
BLAST of mRNA_S-ischiensis_contig80.19847.1 vs. uniprot
Match: A0A0A9WI29_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9WI29_LYGHE) HSP 1 Score: 226 bits (577), Expect = 2.950e-67 Identity = 123/356 (34.55%), Postives = 206/356 (57.87%), Query Frame = 0
Query: 1 MDKDLQGLWNKGAFSDEPAPPDRKPVKTRYVYKIKHKVVGSVERYKARLVARGFTQQQGVDFFQTFSPVFGLDVMRSVLATAACPGWAIHSLDFTQAYLNASLQEDIWLELPDG------NIVKANKALYGLKQSALEWYKELRSTILGEGWSSSANDQCLYYRRSEDGRVAVLLTYVNDTAFTGDYGEEIKRMRDTLLSTYEGRDLGVPDQLLGVRITTDETGIILDQLLYTRSIVTEGMGSLDLRITTSPLDPGVDLSAR---RDDEEELDCKLYPYANILGKLMFLAGMTRPDLASSVRELGCRAASPCTRHWRGLQHVLRYLAGTLDVCIHYAANMDTNDEQVLIGYSDSDW 347
M+++L L + PP + + +++V+KIK+ G+VERYKARLVA+GFTQ+ GVD+ +T+SPV L +R + A W IH +D AYLN L+E+I+++ PDG + + ++LYGLKQS WY++L +L G + ++ C+YYRR + V ++L YV+D E + M++ L ++ +DLG + +LG+ + + + L+Q+ Y + I++E D + ++P++ ++ + + DEE + + PY ++GKLM+L+ TRPDL +V +LG +++P HW + LRYL GT++ Y +D D+ L+GYSDSDW
Sbjct: 45 MEEELTSLEVMKVWEFTELPPGKTAIGSKWVFKIKYMADGTVERYKARLVAQGFTQKPGVDYEETYSPVISLPAIRLLFKLAVNNNWIIHQMDVKTAYLNGELKEEIYMKCPDGITGAEGKVCRLLRSLYGLKQSGRSWYEKLDEKLLEGGMNKCKSEPCIYYRRCNE-NVKIILVYVDDLILISSSEECMVEMKEMLRRNFDMKDLGELNYILGIEVKKGDHSLRLNQVKYIKEILSE-FNMSDCKSVSTPMETNYNIGKQHCPKSDEERKEMEKVPYRRLVGKLMYLSQATRPDLGFAVSKLGQFSSNPGKVHWMAAKRELRYLKGTMN----YEFIIDKGDDD-LVGYSDSDW 393
BLAST of mRNA_S-ischiensis_contig80.19847.1 vs. uniprot
Match: A0A392MAV7_9FABA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Trifolium medium TaxID=97028 RepID=A0A392MAV7_9FABA) HSP 1 Score: 229 bits (584), Expect = 1.040e-66 Identity = 133/377 (35.28%), Postives = 211/377 (55.97%), Query Frame = 0
Query: 1 MDKDLQGLWNKGAFSDEPAPPDRKPVKTRYVYKIKHKVVGSVERYKARLVARGFTQQQGVDFFQTFSPVFGLDVMRSVLATAACPGWAIHSLDFTQAYLNASLQEDIWLELPDG-------NIVKANKALYGLKQSALEWYKELRSTILGEGWSSSANDQCLYYRRSEDGRVAVLLTYVNDTAFTGDYGEEIKRMRDTLLSTYEGRDLGVPDQLLGVRITTDETGIILDQLLYTRSIVTEGMGSLDLRITTSPLDPGVDLSARRDDEEELDCKLYPYANILGKLMFLAGMTRPDLASSVRELGCRAASPCTRHWRGLQHVLRYLAGTLDVCIHYAANMDTNDEQVLIGYSDSDWGNDIETRRSVTGYILLYDRSPIA 370
M+ +L L G + PP KP+ +++VYKIK+K G++ERYKARLVA+G+ Q +G+DFF TFSPV L +R +LA AA W +H LD A+L+ LQED+++ +P+G + K K+LYGLKQ++ +WY++L S ++ EG+ S D L+ S D LL YV+D G E +R++ L + ++ +DLGV LG+ + GI + Q Y ++ + G L + T+PLDP V L +D+ +L + Y ++G+L++L TRPD++ ++++L P H+ V+RYL + ++ + D L+G+SD+DW I+TRRS TGY S ++
Sbjct: 47 MNDELDALAKTGTWKIVDLPPLTKPIGSKWVYKIKYKADGTIERYKARLVAKGYNQVEGLDFFDTFSPVAKLTTVRLLLAIAAIKNWNLHQLDVNNAFLHGDLQEDVYMTIPEGVTSPKPNQVCKLLKSLYGLKQASRKWYEKLTSLLIQEGYKQSTADYSLFTLHS-DTNFTALLVYVDDIILAGTSLLEFERIKGILDAHFKIKDLGVLKYFLGLEVAQSREGITVSQRKYCLDLLKDS-GLLASKPATTPLDPAVKL---HNDDGKLYEDISAYRRLIGRLLYLTN-TRPDISFAIQQLSQFLHKPTMVHYNAACRVVRYLKHNPGRGLLFSRHSDLQ----LLGFSDADWAGCIDTRRSTTGYCFFLGSSLVS 413
BLAST of mRNA_S-ischiensis_contig80.19847.1 vs. uniprot
Match: A0A383VEJ4_TETOB (Integrase catalytic domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VEJ4_TETOB) HSP 1 Score: 238 bits (607), Expect = 1.690e-66 Identity = 143/378 (37.83%), Postives = 208/378 (55.03%), Query Frame = 0
Query: 1 MDKDLQGLWNKGAFSDEPAPPDRKPVKTRYVYKIKHKVVGSVERYKARLVARGFTQQQGVDFFQTFSPVFGLDVMRSVLATAACPGWAIHSLDFTQAYLNASLQEDIWLELPDGNI-------VKANKALYGLKQSALEWYKELRSTILGEGWSSSANDQCLYYRR-SEDGRVAVLLTYVNDTAFTGDYGEEIKRMRDTLLSTYEGRDLGVPDQLLGVRITTDETGIILDQLLYTRSIVTE-GMGSLDLRITTSPLDPGVDLSARRDDEEELDCKLYPYANILGKLMFLAGMTRPDLASSVRELGCRAASPCTRHWRGLQHVLRYLAGTLDVCIHYAANMDTNDEQVLIGYSDSDWGNDIETRRSVTGYILLYDRSPI 369
MD ++QG+ + G + PP K + T++ +K+K GS ER KAR+VA+GF QQ+G D+F+ F+PV MR++ A AA IH++DF+ A+LN +L+E++W++ P+G + K K+LYGLKQ+ W+ L I +G+ S D CLYY SE LL YV+D A E + S Y+ RDLG + LG+ IT TGI L Q +V + GM + + R+ P+ PG L+ + +D E LD YPYA ++G L++LA TRPD+A V L A+P HW + VLRYLAGT ++Y+ LIGY+DSD+ D +TRRS G+ + + I
Sbjct: 859 MDTEIQGIRSNGTWVLGFPPPGTKVLDTKWTFKLKRNSDGSTERRKARVVAKGFQQQEGRDYFEIFTPVGKYTSMRALTAKAAAEDLIIHNIDFSSAFLNGTLEEEVWIKQPEGYVEGEPGMACKLVKSLYGLKQAPRAWHLNLDKIIQEKGFKPSEADPCLYYHTGSEYHPETYLLVYVDDVAIYTKSQESANALISYFSSKYKLRDLGAAELFLGISITRQPTGIKLAQERMINDLVAKYGMENSNGRLL--PMSPGTKLT-KDEDSEPLDTSKYPYATLVGALLYLANCTRPDIAYPVGVLARFMANPGMSHWHAAKGVLRYLAGTSTYGLNYSK---AGSSSTLIGYTDSDFAGDADTRRSTAGFTFIKGNAAI 1230
BLAST of mRNA_S-ischiensis_contig80.19847.1 vs. uniprot
Match: Q10G43_ORYSJ (Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q10G43_ORYSJ) HSP 1 Score: 231 bits (589), Expect = 1.110e-65 Identity = 129/368 (35.05%), Postives = 212/368 (57.61%), Query Frame = 0
Query: 4 DLQGLWNKGAFSDEPAPPDRKPVKTRYVYKIKHKVVGSVERYKARLVARGFTQQQGVDFFQTFSPVFGLDVMRSVLATAACPGWAIHSLDFTQAYLNASLQEDIWLELPDGNIVKAN--------KALYGLKQSALEWYKELRSTILGEGWSSSANDQCLYYRRSEDGRVAVLLTYVNDTAFTGDYGEEIKRMRDTLLSTYEGRDLGVPDQLLGVRITTDETGIILDQLLYTRSIVTEGMGSLDLRITTSPLDPGVDLSA-RRDDEEELDCKLYPYANILGKLMFLAGMTRPDLASSVRELGCRAASPCTRHWRGLQHVLRYLAGTLDVCIHYAANMDTNDEQVLIGYSDSDWGNDIETRRSVTGYIL 362
++ + G + P KPV ++V+K K + G++E+YKARLVA+G+TQ++G DFF T+SPV L +R +L+ AA G +H +D A+LN L E+I+++ PDG +V+ K+LYGLKQ+ +W+++ T+ G++ + D+C+YYR G +L YV+D G E I ++ L ++ +DLGV D +L +++ E GI L Q Y I+ G +D + + +P DP + L +R +L+ Y+ I+G LM+LA TRPD++ +V +L ++P HWR L+ V+RYL GT+++ +HY T VL GYSDS+W +D++ ++ +GY+
Sbjct: 237 EMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHG-GGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNR-FGYIDSKPSPTPYDPSLLLRKNKRIARNQLE-----YSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHY-----TGYPAVLEGYSDSNWISDVDEIKATSGYVF 592
BLAST of mRNA_S-ischiensis_contig80.19847.1 vs. uniprot
Match: Q53NX4_ORYSJ (Retrotransposon protein, putative, Ty1-copia sub-class n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q53NX4_ORYSJ) HSP 1 Score: 230 bits (586), Expect = 1.360e-65 Identity = 129/368 (35.05%), Postives = 211/368 (57.34%), Query Frame = 0
Query: 4 DLQGLWNKGAFSDEPAPPDRKPVKTRYVYKIKHKVVGSVERYKARLVARGFTQQQGVDFFQTFSPVFGLDVMRSVLATAACPGWAIHSLDFTQAYLNASLQEDIWLELPDGNIVKAN--------KALYGLKQSALEWYKELRSTILGEGWSSSANDQCLYYRRSEDGRVAVLLTYVNDTAFTGDYGEEIKRMRDTLLSTYEGRDLGVPDQLLGVRITTDETGIILDQLLYTRSIVTEGMGSLDLRITTSPLDPGVDLSA-RRDDEEELDCKLYPYANILGKLMFLAGMTRPDLASSVRELGCRAASPCTRHWRGLQHVLRYLAGTLDVCIHYAANMDTNDEQVLIGYSDSDWGNDIETRRSVTGYIL 362
++ + G + P KPV ++V+K K + G++E+YKARLVA+G+TQ++G DFF T+SPV L +R +L+ AA G +H +D A+LN L E+I+++ PDG +V+ K+LYGLKQ+ +W+++ T+ G+ + D+C+YYR G +L YV+D G E I ++ L ++ +DLGV D +L +++ E GI L Q Y I+ G +D + + +P DP + L +R +L+ Y+ I+G LM+LA TRPD++ +V +L ++P HWR L+ V+RYL GT+++ +HY T VL GYSDS+W +D++ ++ +GY+
Sbjct: 206 EMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFVVNEADKCVYYRHG-GGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNR-FGYIDSKPSPTPYDPSLLLRKNKRIARNQLE-----YSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHY-----TGYPAVLEGYSDSNWISDVDEIKATSGYVF 561 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig80.19847.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_S-ischiensis_contig80.19847.1 ID=prot_S-ischiensis_contig80.19847.1|Name=mRNA_S-ischiensis_contig80.19847.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=371bpback to top |