prot_S-ischiensis_contig8.19751.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19751.1
Unique Nameprot_S-ischiensis_contig8.19751.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length36
Homology
BLAST of mRNA_S-ischiensis_contig8.19751.1 vs. uniprot
Match: A0A1Y1XXG7_9FUNG (60S ribosomal protein L39 n=3 Tax=Fungi incertae sedis TaxID=112252 RepID=A0A1Y1XXG7_9FUNG)

HSP 1 Score: 75.9 bits (185), Expect = 1.570e-17
Identity = 33/34 (97.06%), Postives = 34/34 (100.00%), Query Frame = 0
Query:    2 KQNRPIPHWIRLRTDNRIRYNAKRRHWRRTKLGL 35
            KQNRPIPHWIRLRTDN+IRYNAKRRHWRRTKLGL
Sbjct:   18 KQNRPIPHWIRLRTDNKIRYNAKRRHWRRTKLGL 51          
BLAST of mRNA_S-ischiensis_contig8.19751.1 vs. uniprot
Match: A0A1Y1YQR8_9FUNG (60S ribosomal protein L39 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YQR8_9FUNG)

HSP 1 Score: 75.9 bits (185), Expect = 2.710e-17
Identity = 33/34 (97.06%), Postives = 34/34 (100.00%), Query Frame = 0
Query:    2 KQNRPIPHWIRLRTDNRIRYNAKRRHWRRTKLGL 35
            KQNRPIPHWIRLRTDN+IRYNAKRRHWRRTKLGL
Sbjct:   40 KQNRPIPHWIRLRTDNKIRYNAKRRHWRRTKLGL 73          
BLAST of mRNA_S-ischiensis_contig8.19751.1 vs. uniprot
Match: A0A2K1KDY3_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KDY3_PHYPA)

HSP 1 Score: 75.9 bits (185), Expect = 3.810e-17
Identity = 33/35 (94.29%), Postives = 34/35 (97.14%), Query Frame = 0
Query:    1 MKQNRPIPHWIRLRTDNRIRYNAKRRHWRRTKLGL 35
            MKQNRPIPHWIR+RTDN IRYNAKRRHWRRTKLGL
Sbjct:   52 MKQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGL 86          
BLAST of mRNA_S-ischiensis_contig8.19751.1 vs. uniprot
Match: UPI001929E926 (60S ribosomal protein L39-2 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929E926)

HSP 1 Score: 75.1 bits (183), Expect = 5.770e-17
Identity = 32/35 (91.43%), Postives = 34/35 (97.14%), Query Frame = 0
Query:    1 MKQNRPIPHWIRLRTDNRIRYNAKRRHWRRTKLGL 35
            M+QNRPIPHWIRLRTDN+IRYNAKRRHWRRTKLG 
Sbjct:   41 MRQNRPIPHWIRLRTDNKIRYNAKRRHWRRTKLGF 75          
BLAST of mRNA_S-ischiensis_contig8.19751.1 vs. uniprot
Match: RL391_ARATH (60S ribosomal protein L39-1 n=6 Tax=Brassicaceae TaxID=3700 RepID=RL391_ARATH)

HSP 1 Score: 73.9 bits (180), Expect = 9.110e-17
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 0
Query:    1 MKQNRPIPHWIRLRTDNRIRYNAKRRHWRRTKLGL 35
            M+QNRPIPHWIRLRTDN IRYNAKRRHWRRTKLG 
Sbjct:   17 MRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 51          
BLAST of mRNA_S-ischiensis_contig8.19751.1 vs. uniprot
Match: A0A0D3BLW0_BRAOL (Uncharacterized protein n=9 Tax=rosids TaxID=71275 RepID=A0A0D3BLW0_BRAOL)

HSP 1 Score: 73.9 bits (180), Expect = 9.110e-17
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 0
Query:    1 MKQNRPIPHWIRLRTDNRIRYNAKRRHWRRTKLGL 35
            M+QNRPIPHWIRLRTDN IRYNAKRRHWRRTKLG 
Sbjct:   17 MRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 51          
BLAST of mRNA_S-ischiensis_contig8.19751.1 vs. uniprot
Match: A0A0A0LYE1_CUCSA (Uncharacterized protein n=9 Tax=fabids TaxID=91835 RepID=A0A0A0LYE1_CUCSA)

HSP 1 Score: 73.9 bits (180), Expect = 9.110e-17
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 0
Query:    1 MKQNRPIPHWIRLRTDNRIRYNAKRRHWRRTKLGL 35
            M+QNRPIPHWIRLRTDN IRYNAKRRHWRRTKLG 
Sbjct:   17 MRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 51          
BLAST of mRNA_S-ischiensis_contig8.19751.1 vs. uniprot
Match: A0A565CAR9_9BRAS (Uncharacterized protein n=14 Tax=Mesangiospermae TaxID=1437183 RepID=A0A565CAR9_9BRAS)

HSP 1 Score: 73.9 bits (180), Expect = 9.550e-17
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 0
Query:    1 MKQNRPIPHWIRLRTDNRIRYNAKRRHWRRTKLGL 35
            M+QNRPIPHWIRLRTDN IRYNAKRRHWRRTKLG 
Sbjct:   19 MRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 53          
BLAST of mRNA_S-ischiensis_contig8.19751.1 vs. uniprot
Match: A0A6A1UWI8_9ROSI (60S ribosomal protein L39-1 n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1UWI8_9ROSI)

HSP 1 Score: 73.9 bits (180), Expect = 1.050e-16
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 0
Query:    1 MKQNRPIPHWIRLRTDNRIRYNAKRRHWRRTKLGL 35
            M+QNRPIPHWIRLRTDN IRYNAKRRHWRRTKLG 
Sbjct:   23 MRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 57          
BLAST of mRNA_S-ischiensis_contig8.19751.1 vs. uniprot
Match: D7LAL7_ARALL (60S ribosomal protein L39 n=2 Tax=Camelineae TaxID=980083 RepID=D7LAL7_ARALL)

HSP 1 Score: 73.6 bits (179), Expect = 1.300e-16
Identity = 32/35 (91.43%), Postives = 34/35 (97.14%), Query Frame = 0
Query:    1 MKQNRPIPHWIRLRTDNRIRYNAKRRHWRRTKLGL 35
            M+QNRPIP+WIRLRTDNRIRYNAKRRHWRRTKLG 
Sbjct:   17 MRQNRPIPNWIRLRTDNRIRYNAKRRHWRRTKLGF 51          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19751.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Y1XXG7_9FUNG1.570e-1797.0660S ribosomal protein L39 n=3 Tax=Fungi incertae s... [more]
A0A1Y1YQR8_9FUNG2.710e-1797.0660S ribosomal protein L39 n=1 Tax=Basidiobolus mer... [more]
A0A2K1KDY3_PHYPA3.810e-1794.29Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]
UPI001929E9265.770e-1791.4360S ribosomal protein L39-2 n=1 Tax=Dioscorea caye... [more]
RL391_ARATH9.110e-1791.4360S ribosomal protein L39-1 n=6 Tax=Brassicaceae T... [more]
A0A0D3BLW0_BRAOL9.110e-1791.43Uncharacterized protein n=9 Tax=rosids TaxID=71275... [more]
A0A0A0LYE1_CUCSA9.110e-1791.43Uncharacterized protein n=9 Tax=fabids TaxID=91835... [more]
A0A565CAR9_9BRAS9.550e-1791.43Uncharacterized protein n=14 Tax=Mesangiospermae T... [more]
A0A6A1UWI8_9ROSI1.050e-1691.4360S ribosomal protein L39-1 n=1 Tax=Morella rubra ... [more]
D7LAL7_ARALL1.300e-1691.4360S ribosomal protein L39 n=2 Tax=Camelineae TaxID... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023626Ribosomal protein L39e domain superfamilyGENE3D1.10.1620.10coord: 1..35
e-value: 4.1E-21
score: 76.5
IPR023626Ribosomal protein L39e domain superfamilySUPERFAMILY48662Ribosomal protein L39ecoord: 1..34
IPR000077Ribosomal protein L39ePFAMPF00832Ribosomal_L39coord: 1..33
e-value: 2.7E-19
score: 68.5
IPR000077Ribosomal protein L39ePANTHERPTHR19970RIBOSOMAL PROTEIN L39Ecoord: 1..34
NoneNo IPR availablePANTHERPTHR19970:SF2760S RIBOSOMAL PROTEIN L39-1coord: 1..34
NoneNo IPR availablePRODOMPD007914coord: 1..22
e-value: 3.0E-5
score: 106.0
IPR020083Ribosomal protein L39e, conserved sitePROSITEPS00051RIBOSOMAL_L39Ecoord: 14..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:3670845..3674434 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19751.1mRNA_S-ischiensis_contig8.19751.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 3669269..3674844 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19751.1 ID=prot_S-ischiensis_contig8.19751.1|Name=mRNA_S-ischiensis_contig8.19751.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=36bp
MKQNRPIPHWIRLRTDNRIRYNAKRRHWRRTKLGL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023626Ribosomal_L39e_dom_sf
IPR000077Ribosomal_L39
IPR020083Ribosomal_L39_CS