prot_S-ischiensis_contig8.19745.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19745.1
Unique Nameprot_S-ischiensis_contig8.19745.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length638
Homology
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BLAST of mRNA_S-ischiensis_contig8.19745.1 vs. uniprot
Match: D7FWC6_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWC6_ECTSI)

HSP 1 Score: 199 bits (506), Expect = 3.110e-50
Identity = 122/301 (40.53%), Postives = 179/301 (59.47%), Query Frame = 0 
Query:    2 LLKLVGRLAVVQGSEDIVTVIERYNVPQNTRGGVDAIVVDLDQRVPKLMDYLRSRSLSPTLGKLPLVAVVIVINPEDPRQELLAQVLESGVDGVLCRPLGEANVAACLGEVLRKRANVAGVYKDLMGEVETFRYPYFGLDGLHFQSVSE-----GGSSALEDENPDFLGESIRIYRWVGNTALSSPRGAKVPPESYSTAVLLINCSXXXXXXXXXXXXXXXXXLPPVSQTSFETSRVRTSTIKSPSVHSSSLQAVTQRQRKTVKMMNQLTGGGIKLTSPQARPQLYQPVAADKSLPGGGGN 297
            +++LVGRLAVVQG++DI+ V+E+ +VP  +R GV+AI+ DLD ++PKLM+ LR RSL P LGKLP+V+V++V++P+D R ELLA  +ESGVD V+ RPL  ++  +C+GEVLRK A+V  VYKD++GEVETF YP F L+G HF  V E     GG    +    +  G+++R Y    +T   +     V    ++   + ++ +              XXX    S T+ + +   ++  KS      S QA T R     K++  + GG +K+TSP  RP+LY     DK   GGGG+
Sbjct:   90 MVRLVGRLAVVQGADDIIAVVEKLHVPHASRSGVNAIITDLDPKIPKLMESLRLRSLRPGLGKLPIVSVIVVVDPDDLRPELLASAIESGVDAVIRRPLERSSFTSCVGEVLRKHASVEFVYKDVVGEVETFNYPRFLLEGFHFLGVGETGSVGGGVGEGDSTFNEIAGDAVRTYTKEASTGSGNGSVTTVGTGGWAQDGI-VSPNGGNAGQSEAPLPTPXXXXXXASTTATDATGFGSAARKS------SRQAATARMMGKTKVLTTMRGGHVKITSPSLRPRLYL-YTGDKGYVGGGGS 382
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19745.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWC6_ECTSI3.110e-5040.53Cyclic nucleotide-binding domain-containing protei... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:3595260..3600551 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19745.1mRNA_S-ischiensis_contig8.19745.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 3595188..3613834 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19745.1 ID=prot_S-ischiensis_contig8.19745.1|Name=mRNA_S-ischiensis_contig8.19745.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=638bp
MLLKLVGRLAVVQGSEDIVTVIERYNVPQNTRGGVDAIVVDLDQRVPKLM
DYLRSRSLSPTLGKLPLVAVVIVINPEDPRQELLAQVLESGVDGVLCRPL
GEANVAACLGEVLRKRANVAGVYKDLMGEVETFRYPYFGLDGLHFQSVSE
GGSSALEDENPDFLGESIRIYRWVGNTALSSPRGAKVPPESYSTAVLLIN
CSSTSSSPSSSSSSPPPPPLPPVSQTSFETSRVRTSTIKSPSVHSSSLQA
VTQRQRKTVKMMNQLTGGGIKLTSPQARPQLYQPVAADKSLPGGGGNGSA
DDSGGGSVSGNGGGANGGGDSGTAGVGPKMRPISHEVQQFVRRKLPPMGS
PRTSAGLSKSRQVQTSKTMKLVETTFAYTRGQKTEHKAGGEHHHRGGGGQ
QGRRRRRRAAAAAAAAEEGGGGEGAAAAGSQGKEQGGASKTATTHGCAAL
MAVSPGSAGGGGGGGSDGGGSTGRKAGALAPRDYAQIEAEVARSRQQPQH
GLVETITRWNKNPVDTAGKGLTHDALKRCIKKLALQRGLEKAKAAAAATA
AAAAAGAGAGAAAAGSGVGAKQGMAGTAATRAAGGRAGGGGERLLPRPRP
PPGGKRRISGSGGGRKGCRTCTGWRLCSWRSRSCGRG*
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