prot_S-ischiensis_contig8.19702.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19702.1
Unique Nameprot_S-ischiensis_contig8.19702.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length107
Homology
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BLAST of mRNA_S-ischiensis_contig8.19702.1 vs. uniprot
Match: A0A6H5K6Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Y8_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 1.330e-7
Identity = 24/32 (75.00%), Postives = 31/32 (96.88%), Query Frame = 0 
Query:   65 WAMGVLINVAGSVAINLGTNIMKLSHKMEKGE 96
            WA+G +IN++GS+AINLGTN+MKLSHKM+KGE
Sbjct:    5 WAIGTMINISGSIAINLGTNLMKLSHKMKKGE 36
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BLAST of mRNA_S-ischiensis_contig8.19702.1 vs. uniprot
Match: D7G9H4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9H4_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 1.360e-7
Identity = 24/32 (75.00%), Postives = 31/32 (96.88%), Query Frame = 0 
Query:   65 WAMGVLINVAGSVAINLGTNIMKLSHKMEKGE 96
            WA+G +IN++GS+AINLGTN+MKLSHKM+KGE
Sbjct:    5 WAIGAMINISGSIAINLGTNLMKLSHKMKKGE 36
[Close]
BLAST of mRNA_S-ischiensis_contig8.19702.1 vs. uniprot
Match: A0A0L0FCY9_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FCY9_9EUKA)

HSP 1 Score: 51.2 bits (121), Expect = 2.070e-6
Identity = 23/37 (62.16%), Postives = 30/37 (81.08%), Query Frame = 0 
Query:   61 GVPPWAMGVLINVAGSVAINLGTNIMKLSHKMEKGEI 97
            GVPPW +G  +NV GS+AINLGTN++KLSH  +K E+
Sbjct:    2 GVPPWIIGATVNVVGSLAINLGTNVIKLSH--DKAEV 36
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19702.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K6Y8_9PHAE1.330e-775.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G9H4_ECTSI1.360e-775.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0L0FCY9_9EUKA2.070e-662.16Uncharacterized protein (Fragment) n=1 Tax=Sphaero... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 61..82
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 33..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 21..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..37
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 38..60
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 83..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:3253395..3254669 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19702.1mRNA_S-ischiensis_contig8.19702.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 3253393..3254669 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19702.1 ID=prot_S-ischiensis_contig8.19702.1|Name=mRNA_S-ischiensis_contig8.19702.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=107bp
SRCWTTVARCARRRQAKRLPLCRSSCLAALAFEAASSERSPENQGGVGPT
GPQPELMSGGGVPPWAMGVLINVAGSVAINLGTNIMKLSHKMEKGEITLP
LITGNTH
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