prot_S-ischiensis_contig8.19700.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19700.1
Unique Nameprot_S-ischiensis_contig8.19700.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length182
Homology
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BLAST of mRNA_S-ischiensis_contig8.19700.1 vs. uniprot
Match: D7G9H4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9H4_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 4.880e-7
Identity = 24/30 (80.00%), Postives = 28/30 (93.33%), Query Frame = 0 
Query:  101 LEAGDEEIDWDHCRMLSFGFFPSVTTDQDM 130
            +EAGDEEIDWDH RMLS GFFPS++TDQD+
Sbjct:  623 MEAGDEEIDWDHTRMLSIGFFPSISTDQDV 652
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19700.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G9H4_ECTSI4.880e-780.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:3244692..3246581 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19700.1mRNA_S-ischiensis_contig8.19700.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 3244692..3246581 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19700.1 ID=prot_S-ischiensis_contig8.19700.1|Name=mRNA_S-ischiensis_contig8.19700.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=182bp
AGEDGGGGGAGDLQSDMQQDLQRMLRLEDSSSEPASSRCVSRAAVGDDAG
LATEAVTESVLAGGGLEMVELEERGRAGAEGRGPLPPPPAAMLPSPPPPD
LEAGDEEIDWDHCRMLSFGFFPSVTTDQDMDLLIHPFDGMEADRVVRRLG
SWCHDGGDATAGPASPSSYFSDGETNGTSDVL
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