prot_S-ischiensis_contig8.19692.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19692.1
Unique Nameprot_S-ischiensis_contig8.19692.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length64
Homology
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BLAST of mRNA_S-ischiensis_contig8.19692.1 vs. uniprot
Match: A0A6H5K182_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K182_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 3.730e-11
Identity = 32/45 (71.11%), Postives = 37/45 (82.22%), Query Frame = 0 
Query:    5 GAGLVRLLLAVYGASLSERDQLIVRLLRLLQGAGVPLPPASCRWG 49
            G GLVR LL+VY  S+ E DQLIVRLLRLLQ +GVPL P++CRWG
Sbjct: 2295 GVGLVRPLLSVYRVSMLEDDQLIVRLLRLLQASGVPLDPSTCRWG 2339
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19692.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K182_9PHAE3.730e-1171.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:3215944..3216282 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19692.1mRNA_S-ischiensis_contig8.19692.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 3215944..3216284 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19692.1 ID=prot_S-ischiensis_contig8.19692.1|Name=mRNA_S-ischiensis_contig8.19692.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=64bp
GGGGGAGLVRLLLAVYGASLSERDQLIVRLLRLLQGAGVPLPPASCRWGK
WAATSSAATTTTAG
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