prot_S-ischiensis_contig8.19682.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19682.1
Unique Nameprot_S-ischiensis_contig8.19682.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length152
Homology
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BLAST of mRNA_S-ischiensis_contig8.19682.1 vs. uniprot
Match: A0A835ZGL3_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGL3_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 8.170e-15
Identity = 48/110 (43.64%), Postives = 67/110 (60.91%), Query Frame = 0 
Query:   45 PVSSFSRQCGAPLRWMVNDQDTVAEGD-EGYASPSADALA--VDIFEAITSGDADAVEAYVKAGGDLTAADSNGDTPLLLAAENHLVSVIKLMVEEGGVDVDAASGASGE 151
            P S+F+  C   LR     +    EG+ +G + P+ DA    VDIF+AI  GDA++V  Y+  GGD+   DS GD+PL+LAAEN    +IKL+V EGG D++  +GA  E
Sbjct:   33 PTSTFAC-CSRGLRRSPFTRFVTVEGNVDGPSIPAPDANTNPVDIFDAILEGDAESVARYIAHGGDVNIRDSIGDSPLMLAAENDFTDIIKLLVHEGGADINGKAGAGME 141
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19682.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZGL3_9STRA8.170e-1543.64Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 114..144
e-value: 0.0085
score: 25.3
IPR002110Ankyrin repeatPFAMPF13606Ank_3coord: 114..144
e-value: 0.0028
score: 18.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 114..138
score: 8.79
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 62..150
e-value: 1.5E-11
score: 46.1
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 87..145
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..151
NoneNo IPR availableTMHMMTMhelixcoord: 7..24
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 89..138
score: 13.469

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:3197863..3198892 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19682.1mRNA_S-ischiensis_contig8.19682.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 3197005..3198943 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19682.1 ID=prot_S-ischiensis_contig8.19682.1|Name=mRNA_S-ischiensis_contig8.19682.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=152bp
MHRPTCLGARVFGFYGLGLWAALQVQGFRIPLVRSAHTARGIRAPVSSFS
RQCGAPLRWMVNDQDTVAEGDEGYASPSADALAVDIFEAITSGDADAVEA
YVKAGGDLTAADSNGDTPLLLAAENHLVSVIKLMVEEGGVDVDAASGASG
E*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom