prot_S-ischiensis_contig8.19666.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19666.1
Unique Nameprot_S-ischiensis_contig8.19666.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length196
Homology
BLAST of mRNA_S-ischiensis_contig8.19666.1 vs. uniprot
Match: A0A6H5K9V4_9PHAE (TFIID_20kDa domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9V4_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 2.370e-25
Identity = 54/102 (52.94%), Postives = 75/102 (73.53%), Query Frame = 0
Query:    1 MSSMRPLHEPFVPPVEPEPKKAQLEGPAHGQRLQALMREIDPAWDLEPDLEELVLYMVDDFVDSALEQSVKMAKHRRSEVMEAKDLQLVLEKQWGMPYLDSG 102
            M++M+PLH   VPPVEPEPK+A+L GP +G RL ALM+E+DPA+ L PD EEL+L +  D ++     +V++A+HR S+ +E +DLQL LEK W MP+L  G
Sbjct:  387 MAAMKPLHPVVVPPVEPEPKEAKLVGPMNGMRLPALMKEVDPAYSLHPDTEELLLALAQDHIEGVAAAAVELAQHRNSDTVELQDLQLCLEKDWDMPWLGIG 488          
BLAST of mRNA_S-ischiensis_contig8.19666.1 vs. uniprot
Match: A0A7S2C423_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C423_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.650e-13
Identity = 36/70 (51.43%), Postives = 49/70 (70.00%), Query Frame = 0
Query:   27 PAHGQRLQALMREIDPAWDLEPDLEELVLYMVDDFVDSALEQSVKMAKHRRSEVMEAKDLQLVLEKQWGM 96
            P  G+RL AL+RE+DP ++LEP+ E L+L+M DDFV      +   A HR+ E +E +DLQLVLEKQW +
Sbjct:   17 PDKGRRLAALLREVDPQFELEPEAEGLLLHMADDFVKRVTRPACVAAAHRKGETLEVRDLQLVLEKQWAI 86          
BLAST of mRNA_S-ischiensis_contig8.19666.1 vs. uniprot
Match: UPI0006B07F93 (transcription initiation factor TFIID subunit 12-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B07F93)

HSP 1 Score: 73.9 bits (180), Expect = 6.520e-13
Identity = 39/84 (46.43%), Postives = 54/84 (64.29%), Query Frame = 0
Query:   31 QRLQALMREIDPAWDLEPDLEELVLYMVDDFVDSALEQSVKMAKHRRSEVMEAKDLQLVLEKQWGMPYLDSGEASAPTARSMST 114
            QRLQ L+RE+DP   L+ D+EEL+L + DDF+++ +  S  +AKHRRS  ++ KD+QL LEK W M     G    P  RS +T
Sbjct:   98 QRLQDLVREVDPNEQLDEDVEELLLQIADDFIENVVTSSCLLAKHRRSSTLDVKDVQLTLEKNWNMWIPGFGVEERPYKRSATT 181          
BLAST of mRNA_S-ischiensis_contig8.19666.1 vs. uniprot
Match: A0A6M2E3S0_9ACAR (Transcription initiation factor TFIID subunit 12 (Fragment) n=1 Tax=Amblyomma tuberculatum TaxID=48802 RepID=A0A6M2E3S0_9ACAR)

HSP 1 Score: 72.4 bits (176), Expect = 1.060e-12
Identity = 35/66 (53.03%), Postives = 50/66 (75.76%), Query Frame = 0
Query:   31 QRLQALMREIDPAWDLEPDLEELVLYMVDDFVDSALEQSVKMAKHRRSEVMEAKDLQLVLEKQWGM 96
            QRLQ L++E+DP   L+ D+EEL+L + DDF+++ +  S  +AKHR+S V+EAKD+QL LEK W M
Sbjct:   53 QRLQDLVKEVDPNEQLDDDVEELLLQVADDFIENVVTTSCLLAKHRKSNVLEAKDVQLSLEKNWNM 118          
BLAST of mRNA_S-ischiensis_contig8.19666.1 vs. uniprot
Match: A0A0C9SAU9_AMBAM (Transcription initiation factor TFIID subunit 12 (Fragment) n=1 Tax=Amblyomma americanum TaxID=6943 RepID=A0A0C9SAU9_AMBAM)

HSP 1 Score: 72.4 bits (176), Expect = 1.160e-12
Identity = 35/66 (53.03%), Postives = 50/66 (75.76%), Query Frame = 0
Query:   31 QRLQALMREIDPAWDLEPDLEELVLYMVDDFVDSALEQSVKMAKHRRSEVMEAKDLQLVLEKQWGM 96
            QRLQ L++E+DP   L+ D+EEL+L + DDF+++ +  S  +AKHR+S V+EAKD+QL LEK W M
Sbjct:   58 QRLQDLVKEVDPNEQLDDDVEELLLQVADDFIENVVTTSCLLAKHRKSNVLEAKDVQLSLEKNWNM 123          
BLAST of mRNA_S-ischiensis_contig8.19666.1 vs. uniprot
Match: A0A1E1WSY0_PECGO (Transcription initiation factor TFIID subunit 12 n=1 Tax=Pectinophora gossypiella TaxID=13191 RepID=A0A1E1WSY0_PECGO)

HSP 1 Score: 71.6 bits (174), Expect = 3.290e-12
Identity = 32/65 (49.23%), Postives = 48/65 (73.85%), Query Frame = 0
Query:   32 RLQALMREIDPAWDLEPDLEELVLYMVDDFVDSALEQSVKMAKHRRSEVMEAKDLQLVLEKQWGM 96
            RLQ L+RE+DP   L+ ++EE++L++ DDF+DS L  +  +AKHR +  +E KD+QL LE+QW M
Sbjct:   77 RLQELVREVDPTVQLDEEVEEMLLHLADDFIDSTLNAACSLAKHRHASTVELKDVQLTLERQWNM 141          
BLAST of mRNA_S-ischiensis_contig8.19666.1 vs. uniprot
Match: A0A131YRT1_RHIAP (Transcription initiation factor TFIID subunit 12 n=10 Tax=Ixodidae TaxID=6939 RepID=A0A131YRT1_RHIAP)

HSP 1 Score: 72.4 bits (176), Expect = 4.710e-12
Identity = 34/66 (51.52%), Postives = 51/66 (77.27%), Query Frame = 0
Query:   31 QRLQALMREIDPAWDLEPDLEELVLYMVDDFVDSALEQSVKMAKHRRSEVMEAKDLQLVLEKQWGM 96
            QRLQ L++E+DP   L+ D+EEL+L + D+F+++ +  S ++AKHR+S V+EAKD+QL LEK W M
Sbjct:  136 QRLQDLVKEVDPNEQLDDDVEELLLQIADEFIENVVTSSCRIAKHRKSNVLEAKDVQLSLEKNWNM 201          
BLAST of mRNA_S-ischiensis_contig8.19666.1 vs. uniprot
Match: A0A212FFJ6_DANPL (Transcription initiation factor TFIID subunit 12 n=2 Tax=Danaus TaxID=13036 RepID=A0A212FFJ6_DANPL)

HSP 1 Score: 70.9 bits (172), Expect = 4.820e-12
Identity = 34/65 (52.31%), Postives = 48/65 (73.85%), Query Frame = 0
Query:   32 RLQALMREIDPAWDLEPDLEELVLYMVDDFVDSALEQSVKMAKHRRSEVMEAKDLQLVLEKQWGM 96
            RLQ L+REIDP   L+ ++EE++L + DDF+D++L  S  +AKHR S  +E KD+QL LE+QW M
Sbjct:   63 RLQELVREIDPTMQLDEEVEEILLQLADDFIDTSLSSSCALAKHRHSSNVELKDVQLHLERQWNM 127          
BLAST of mRNA_S-ischiensis_contig8.19666.1 vs. uniprot
Match: F6WT81_CIOIN (Transcription initiation factor TFIID subunit 12 n=2 Tax=Ciona intestinalis TaxID=7719 RepID=F6WT81_CIOIN)

HSP 1 Score: 71.2 bits (173), Expect = 5.560e-12
Identity = 33/66 (50.00%), Postives = 50/66 (75.76%), Query Frame = 0
Query:   31 QRLQALMREIDPAWDLEPDLEELVLYMVDDFVDSALEQSVKMAKHRRSEVMEAKDLQLVLEKQWGM 96
            QRLQ L+REIDPA  L+ D+EE+++ + DDF+++ +  S ++AKHR S  +E KDL+L L+KQW +
Sbjct:   87 QRLQELIREIDPAEQLDEDVEEMLMQITDDFIENVVSASCELAKHRNSNTLEVKDLKLHLDKQWNI 152          
BLAST of mRNA_S-ischiensis_contig8.19666.1 vs. uniprot
Match: R4FLY8_RHOPR (Transcription initiation factor TFIID subunit 12 n=6 Tax=Triatominae TaxID=70999 RepID=R4FLY8_RHOPR)

HSP 1 Score: 70.9 bits (172), Expect = 5.680e-12
Identity = 34/65 (52.31%), Postives = 49/65 (75.38%), Query Frame = 0
Query:   32 RLQALMREIDPAWDLEPDLEELVLYMVDDFVDSALEQSVKMAKHRRSEVMEAKDLQLVLEKQWGM 96
            RLQ L+RE+DP   L+ D+E+++L+M DDFV+SA+  +  +AKHR+S  +E KDLQL LE+ W M
Sbjct:   71 RLQDLVREVDPNEQLDEDVEDVLLHMADDFVESAISAACLLAKHRKSSTVEVKDLQLHLERNWNM 135          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19666.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9V4_9PHAE2.370e-2552.94TFIID_20kDa domain-containing protein n=1 Tax=Ecto... [more]
A0A7S2C423_9STRA1.650e-1351.43Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
UPI0006B07F936.520e-1346.43transcription initiation factor TFIID subunit 12-l... [more]
A0A6M2E3S0_9ACAR1.060e-1253.03Transcription initiation factor TFIID subunit 12 (... [more]
A0A0C9SAU9_AMBAM1.160e-1253.03Transcription initiation factor TFIID subunit 12 (... [more]
A0A1E1WSY0_PECGO3.290e-1249.23Transcription initiation factor TFIID subunit 12 n... [more]
A0A131YRT1_RHIAP4.710e-1251.52Transcription initiation factor TFIID subunit 12 n... [more]
A0A212FFJ6_DANPL4.820e-1252.31Transcription initiation factor TFIID subunit 12 n... [more]
F6WT81_CIOIN5.560e-1250.00Transcription initiation factor TFIID subunit 12 n... [more]
R4FLY8_RHOPR5.680e-1252.31Transcription initiation factor TFIID subunit 12 n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009072Histone-foldGENE3D1.10.20.10coord: 29..96
e-value: 2.4E-22
score: 80.8
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 32..96
IPR003228Transcription initiation factor TFIID subunit 12 domainPFAMPF03847TFIID_20kDacoord: 31..96
e-value: 1.2E-20
score: 73.7
IPR037794Transcription initiation factor TFIID subunit 12PANTHERPTHR12264FAMILY NOT NAMEDcoord: 32..145
NoneNo IPR availablePRODOMPD012998coord: 31..96
e-value: 2.0E-12
score: 173.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:3084362..3087338 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19666.1mRNA_S-ischiensis_contig8.19666.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 3084328..3088079 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19666.1 ID=prot_S-ischiensis_contig8.19666.1|Name=mRNA_S-ischiensis_contig8.19666.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=196bp
MSSMRPLHEPFVPPVEPEPKKAQLEGPAHGQRLQALMREIDPAWDLEPDL
EELVLYMVDDFVDSALEQSVKMAKHRRSEVMEAKDLQLVLEKQWGMPYLD
SGEASAPTARSMSTKAKANLAAQRQKAFKEAGKKDAASPATKKKAPKRKL
PTPGSGSGAAGSGPKKQRPATAASAAAAAAAASGGAGAGAGGQGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009072Histone-fold
IPR003228TFIID_TAF12_dom
IPR037794TAF12