prot_S-ischiensis_contig8.19600.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19600.1
Unique Nameprot_S-ischiensis_contig8.19600.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length126
Homology
BLAST of mRNA_S-ischiensis_contig8.19600.1 vs. uniprot
Match: A0A6H5KZM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZM1_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 3.540e-23
Identity = 55/117 (47.01%), Postives = 70/117 (59.83%), Query Frame = 0
Query:    3 ATRCLVSDHLRLLWGGGSEGDGD-GGPEALSKKKLTDWRMEAVVLGLAVDTEAMRIGLPAEKCNALRALL-VQWPPRSTRARAHDILELAGKLWNAAYVVRTGRYFVWRLLRLTGLH 117
            A+  L SDH+RL       G G+ G P  LS KK TDW      LG  +DT A RI    E+ +A+R +L   WP    +AR   +L +AGKLWN  +V+R GRYFVW+LLRL+GLH
Sbjct:  281 ASALLASDHVRLF------GKGELGKPPILSPKKSTDWDTVIEALGYIIDTHAGRIATTPERVSAIRNILETDWPHDRKKARVQQVLSIAGKLWNLTHVIRAGRYFVWQLLRLSGLH 391          
BLAST of mRNA_S-ischiensis_contig8.19600.1 vs. uniprot
Match: A0A6H5JGT0_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGT0_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 5.500e-22
Identity = 51/113 (45.13%), Postives = 69/113 (61.06%), Query Frame = 0
Query:    7 LVSDHLRLLWGGGSEGDGDGGPEALSKKKLTDWRMEAVVLGLAVDTEAMRIGLPAEKCNALR-ALLVQWPPRSTRARAHDILELAGKLWNAAYVVRTGRYFVWRLLRLTGLHR 118
            L SD++RL  G G  G+       L+ KK ++W  +   LG  +D+  ++I L  +K  AL+ AL + WP     A A ++  +AGKLWN  YVVR G+YFVWRLLRLTGLHR
Sbjct: 1204 LASDYVRLF-GPGEPGE----TPILAPKKSSNWDTQLEYLGFVIDSHKLKISLTTKKAEALKTALEIDWPRHKREATAQEVFSIAGKLWNLTYVVRAGKYFVWRLLRLTGLHR 1311          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19600.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KZM1_9PHAE3.540e-2347.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGT0_9PHAE5.500e-2245.13Uncharacterized protein n=5 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:2417237..2417614 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19600.1mRNA_S-ischiensis_contig8.19600.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 2417066..2417614 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19600.1 ID=prot_S-ischiensis_contig8.19600.1|Name=mRNA_S-ischiensis_contig8.19600.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=126bp
MRATRCLVSDHLRLLWGGGSEGDGDGGPEALSKKKLTDWRMEAVVLGLAV
DTEAMRIGLPAEKCNALRALLVQWPPRSTRARAHDILELAGKLWNAAYVV
RTGRYFVWRLLRLTGLHRCPSLPPGA
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