prot_S-ischiensis_contig8.19593.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19593.1
Unique Nameprot_S-ischiensis_contig8.19593.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length258
Homology
BLAST of mRNA_S-ischiensis_contig8.19593.1 vs. uniprot
Match: A0A836CC54_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC54_9STRA)

HSP 1 Score: 141 bits (356), Expect = 1.540e-34
Identity = 104/253 (41.11%), Postives = 150/253 (59.29%), Query Frame = 0
Query:    6 SVQLFRMEQELAAQVEESMEDAAVAEAQHVQKLGAMRDELDERMSHQHRHLRRKQAKLQERADRLMQDRHNAFYEAELLQGQVAAATAEVRAARQRIFELELALQAERSRNAAAAAQPQASGPGMAAELGKLRDQSQSLGAQVRQARKEAAQGRQELGRESAMNEALRRDLDNARHRLLTLQGSLAETAEEGAGLSRELEAERVRSAAAARCLEDTVNSQEGALAALRGEVRAMREQRDSFGEEAATANAKLR 258
            + QL R+E  LA QV+E +E+AA+++A H + +  ++ E +  +S +HR  R K+ KL E   R+ + R     EAE LQ Q+   +A++R +RQR  +LE A+   + R      +P    P  A ++ +LRD+       +R+ ++EA    + LGRE A   AL+RDLD ARH+LLTLQGSLAE A E   L RELEAERVR+ A  R   ++  +   ALAA R     +R QRD+F E AAT+ A+LR
Sbjct:    5 AAQLLRLEHALAEQVQEDLEEAAISQAHHEEVVSKLQAEAEAAVSREHRRHRSKETKLHEALKRVARSRAALQREAEALQDQLVLVSAQLRLSRQRSLDLESAMGELKLRPPQQVERPD---PDAAFQIAQLRDKLSGTETALRECQREARDSAEALGRERAAGLALQRDLDAARHKLLTLQGSLAEGARENGALMRELEAERVRAVAQQRRAAESEEALAAALAAARAAADGLRSQRDAFCEAAATSAARLR 254          
BLAST of mRNA_S-ischiensis_contig8.19593.1 vs. uniprot
Match: D7FQ57_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ57_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 2.000e-30
Identity = 101/249 (40.56%), Postives = 156/249 (62.65%), Query Frame = 0
Query:   12 MEQELAAQVEESMEDAAVAEAQHVQKLGAMRDELDERMSHQHRHLRRKQAKLQERADRLMQDRHNAFYEAELLQGQVAAATAEVRAARQRIFELELALQAERSRNAAAAAQPQA---SGPGMAAELGKLRDQSQSLGAQVRQARKEAAQGRQELGRESAMNEALRRDLDNARHRLLTLQGSLAETAEEGAGLSRELEAERVRSAAAARCLEDTVNSQEGALAALRGEVRAMREQRDSFGEEAATANAKL 257
            ME+EL AQ+++S+     AE+Q +++    +D+L+       R L  ++AK +E   R   ++ +A  +AE LQ Q+  +  EV  AR+RIF+LE   Q+ RS      + PQ    + P   AE+ +LRD+  +   Q R+A++ AA+ ++ +GRESA+N+  +RD+DNARHRLLT+QGSLAE +EE AGL RELE ER+++ A +R L D V+ Q+ ALA +R +   +REQRD   +++A    KL
Sbjct:    1 MERELEAQMKDSL-----AESQALREK--FQDDLECMQQDAQRRLVEEKAKWKEHILRAEGEKADAIQQAEFLQEQLITSANEVWIARERIFQLESEAQSIRS------SPPQVVERADPAAVAEVMRLRDKVAARDEQARRAQRAAAEAQEAVGRESAINQGFQRDVDNARHRLLTVQGSLAELSEENAGLRRELENERIKTVAGSRRLADAVDRQDNALAEVRRDSAQLREQRDRLAQDSAILGIKL 236          
BLAST of mRNA_S-ischiensis_contig8.19593.1 vs. uniprot
Match: A0A6H5L397_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L397_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 2.850e-21
Identity = 59/117 (50.43%), Postives = 86/117 (73.50%), Query Frame = 0
Query:  128 PGMAAELGKLRDQSQSLGAQVRQARKEAAQGRQELGRESAMNEALRRDLDNARHRLLTLQGSLAETAEEGAGLSRELEAERVRSAAAARCLEDTVNSQEGALAALRGEVRAMREQRD 244
            P   AE+ +LRD+  +   Q R+A++ AA+ ++ +GRESA+N+  +RD+DNARHRLLT+QGSLAE +EE AGL RELE+ER+++ + +R L D V  Q+ ALA +R +   +REQRD
Sbjct:   24 PAAVAEVMRLRDKVAARDEQARRAQRAAAEAQEAVGRESAINQGFQRDVDNARHRLLTVQGSLAELSEENAGLRRELESERIKTVSGSRRLADAVERQDNALAEVRRDSAQLREQRD 140          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19593.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A836CC54_9STRA1.540e-3441.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FQ57_ECTSI2.000e-3040.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L397_9PHAE2.850e-2150.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 169..189
NoneNo IPR availableCOILSCoilCoilcoord: 222..249
NoneNo IPR availableCOILSCoilCoilcoord: 13..33
NoneNo IPR availableCOILSCoilCoilcoord: 81..108
NoneNo IPR availableCOILSCoilCoilcoord: 53..73
NoneNo IPR availableCOILSCoilCoilcoord: 134..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:2389771..2393909 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19593.1mRNA_S-ischiensis_contig8.19593.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 2389771..2393911 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19593.1 ID=prot_S-ischiensis_contig8.19593.1|Name=mRNA_S-ischiensis_contig8.19593.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=258bp
SFRYHSVQLFRMEQELAAQVEESMEDAAVAEAQHVQKLGAMRDELDERMS
HQHRHLRRKQAKLQERADRLMQDRHNAFYEAELLQGQVAAATAEVRAARQ
RIFELELALQAERSRNAAAAAQPQASGPGMAAELGKLRDQSQSLGAQVRQ
ARKEAAQGRQELGRESAMNEALRRDLDNARHRLLTLQGSLAETAEEGAGL
SRELEAERVRSAAAARCLEDTVNSQEGALAALRGEVRAMREQRDSFGEEA
ATANAKLR
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