prot_S-ischiensis_contig8.19570.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19570.1
Unique Nameprot_S-ischiensis_contig8.19570.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length231
Homology
BLAST of mRNA_S-ischiensis_contig8.19570.1 vs. uniprot
Match: A0A835YUZ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUZ7_9STRA)

HSP 1 Score: 146 bits (368), Expect = 4.870e-40
Identity = 86/217 (39.63%), Postives = 117/217 (53.92%), Query Frame = 0
Query:   14 LTVAGTSAFVQPAVPRCVPRGVGVNPCRSRTSIARIGSGAGGSRARPARSNGSGGLRLQSDDQVSLRERTLSVLPYLLPALDGIDYGQYVYRAFPLFGDILYTFFAPELFIWRGIPFAPLVIFIGLTIVARQPSLSRFTRFNIQQAILLDIALVVLGLLRDLSKFIGGAAAGELASNFIFYCVAFTVSYCVLENSKGVAPNQIPVISQAADMQVGPF 230
            L V    A VQ     C    VG     S  S  R+     G R    R++G   L + SDD      R L+  PY+LP LDG+  G+ VY A P  G+ +Y    P L IW G+PF    +F+  T  AR   LSR  RF++QQAIL+DIAL+VLGLL +++K +    A   A+   FY +   V+Y ++ N +G  PN+IP+IS+AA  Q+GPF
Sbjct:   11 LLVLAALAEVQGFASTCTVGSVGTRQHHSVASAGRLTCSTIGQRGSQRRTSG---LCMASDDSAPFEARLLACFPYILPVLDGVGSGRNVYAAVPAVGEAVYGVLGPALAIWNGVPFLGFGVFLAFTFAARNTELSRLVRFSLQQAILIDIALIVLGLLENVTKAVAPGGADVFAT-LQFYILISAVAYSLVSNLQGKEPNEIPIISEAAQRQIGPF 223          
BLAST of mRNA_S-ischiensis_contig8.19570.1 vs. uniprot
Match: D7G3C5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C5_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 8.910e-38
Identity = 74/153 (48.37%), Postives = 101/153 (66.01%), Query Frame = 0
Query:   78 SLRERTLSVLPYLLPALDGIDYGQYVYRAFPLFGDILYTFFAPELFIWRGIPFAPLVIFIGLTIVARQPSLSRFTRFNIQQAILLDIALVVLGLLRDLSKFIGGAAAGE-LASNFIFYCVAFTVSYCVLENSKGVAPNQIPVISQAADMQVGP 229
            S+R R L  + YLLP LDG+D G+ V+ A P+ G +++   AP L IW  +PF PLV+FI L +  R+   SRF RFN+QQAIL+DI  VVLGLL   + ++  A  GE   +NF FYC+   V+Y V E ++G   NQIP+IS AA++Q+GP
Sbjct:   13 SVRNRALGTVVYLLPMLDGLDCGRDVFHAVPMLGSLVHGVLAPALAIWDNVPFMPLVMFIILQVSVRRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYV--APEGEQFVTNFAFYCLVGAVAYAVAETARGKMANQIPLISAAAEIQLGP 163          
BLAST of mRNA_S-ischiensis_contig8.19570.1 vs. uniprot
Match: A0A7S4ES88_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ES88_CHRCT)

HSP 1 Score: 139 bits (349), Expect = 3.230e-37
Identity = 76/156 (48.72%), Postives = 99/156 (63.46%), Query Frame = 0
Query:   75 DQVSLRERTLSVLPYLLPALDGIDYGQYVYRAFPLFGDILYTFFAPELFIWRGIPFAPLVIFIGLTIVARQPSLSRFTRFNIQQAILLDIALVVLGLLRDLSKFIGGAAAGELASNFIFYCVAFTVSYCVLENSKGVAPNQIPVISQAADMQVGPF 230
            D+    ER L+ LPY+LPA+DG  YG YVY+  P  G I    F P +  +  IPF  LV FIG+++  R P+LSRF RFNIQQA+LLDIAL+V GL   L+K         L +NFIFY     V Y +  N++G AP+Q+P++S AA MQ+GPF
Sbjct:   68 DEAPALERVLATLPYVLPAIDGFAYGLYVYQNVPPIGAIAGAAF-PFVASFESIPFGGLVFFIGMSLFTRNPNLSRFVRFNIQQALLLDIALIVPGLFGPLTKTFP-VELQILGTNFIFYAWVLVVGYALFSNAQGKAPDQVPLLSDAASMQIGPF 221          
BLAST of mRNA_S-ischiensis_contig8.19570.1 vs. uniprot
Match: A0A6H5LCJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCJ5_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 3.820e-36
Identity = 74/153 (48.37%), Postives = 101/153 (66.01%), Query Frame = 0
Query:   78 SLRERTLSVLPYLLPALDGIDYGQYVYRAFPLFGDILYTFFAPELFIWRGIPFAPLVIFIGLTIVARQPSLSRFTRFNIQQAILLDIALVVLGLLRDLSKFIGGAAAGE-LASNFIFYCVAFTVSYCVLENSKGVAPNQIPVISQAADMQVGP 229
            S+R R L  + YLLP LDG+D G+ V+ A P+ G +++   AP L IW  +PF PLV+FI L +  R+   SRF RFN+QQAIL+DI  VVLGLL   + ++  A  GE   +NF FYC+   V+Y V E ++G   NQIP+IS AA++Q+GP
Sbjct:  154 SVRNRALGTVVYLLPMLDGLDCGRDVFHAVPMLGSLVHGVLAPALAIWDNVPFMPLVMFIILQVSVRRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYV--APEGEQFVTNFAFYCLVGAVAYAVAETARGKMANQIPLISAAAEIQLGP 304          
BLAST of mRNA_S-ischiensis_contig8.19570.1 vs. uniprot
Match: A0A7S2XVV7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVV7_9STRA)

HSP 1 Score: 133 bits (334), Expect = 5.210e-35
Identity = 66/159 (41.51%), Postives = 104/159 (65.41%), Query Frame = 0
Query:   72 QSDDQVSLRERTLSVLPYLLPALDGIDYGQYVYRAFPLFGDILYTFFAPELFIWRGIPFAPLVIFIGLTIVARQPSLSRFTRFNIQQAILLDIALVVLGLLRDLSKFIGGAAAGELASNFIFYCVAFTVSYCVLENSKGVAPNQIPVISQAADMQVGPF 230
            Q D+ V + ER  ++LPY LP  D I++G++++  FPL  ++L  F      I+RG+PF  L+IF+  ++ +R PS+ RF RF+IQQA+L+DIAL+   L   L+K +  +   E A+NF+FY    + +Y V+ N+ G  PN+IP+ISQ+A+  +GPF
Sbjct:   61 QDDESVPIDERIFAILPYALPLSDSIEFGRFIFAEFPLLRELLDIFIGIFYDIYRGVPFIGLLIFLAFSVASRTPSIPRFARFSIQQALLIDIALIFPQLFGGLAKELPLSVV-EPATNFVFYAAFASCTYSVISNALGKVPNEIPLISQSAETSIGPF 218          
BLAST of mRNA_S-ischiensis_contig8.19570.1 vs. uniprot
Match: A0A7S0PYH6_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PYH6_9EUKA)

HSP 1 Score: 130 bits (326), Expect = 4.010e-34
Identity = 67/156 (42.95%), Postives = 100/156 (64.10%), Query Frame = 0
Query:   75 DQVSLRERTLSVLPYLLPALDGIDYGQYVYRAFPLFGDILYTFFAPELFIWRGIPFAPLVIFIGLTIVARQPSLSRFTRFNIQQAILLDIALVVLGLLRDLSKFIGGAAAGELASNFIFYCVAFTVSYCVLENSKGVAPNQIPVISQAADMQVGPF 230
            ++V   +R    LPY+LP LDG  YG YVY+  P  G++     AP + +++ +PFA +V+FIGL++  R   LSR  RFNIQQA+LLDIAL++ GL   ++  +       + +NF+FY   FTV Y    N++G  P+Q+PV+S+AA MQ+GP+
Sbjct:   39 EEVPAVDRVFGTLPYILPVLDGFGYGIYVYQNVPGAGEVAGVI-APLVALFQSLPFAGIVLFIGLSLFTRNAGLSRMVRFNIQQALLLDIALIIPGLFSPVTSLLP-LELQIIGTNFVFYVCVFTVIYSAWSNAQGELPDQVPVLSEAAMMQIGPY 192          
BLAST of mRNA_S-ischiensis_contig8.19570.1 vs. uniprot
Match: A0A7S2ZG79_9RHOD (Tic20 family protein Ycf60 n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZG79_9RHOD)

HSP 1 Score: 127 bits (320), Expect = 4.520e-33
Identity = 66/158 (41.77%), Postives = 99/158 (62.66%), Query Frame = 0
Query:   80 RERTLSVLPYLLPALDGIDYGQYVYRAFPLFGDILYTFFAPELFIWRGIPFAPLVIFIGLT-IVARQPSLSRFTRFNIQQAILLDIALVVLGLLRDLSKFIGGAAA------GELASNFIFYCVAFTVSYCVLENSKGVAPNQIPVISQAADMQVGPF 230
            ++R  S+LPY LP LD + YG Y+++ FP+F +++    AP   I+RGIPF  L IF G+  +V R  +++RF R+N QQAI+LD+ L++  L        GGAAA       E  +N +FY +   V Y V+EN +G  PN+IP++S++ D Q+GPF
Sbjct:   55 KDRFFSILPYFLPLLDSLQYGSYLFQKFPVFKELVLYPLAPFYAIYRGIPFLDLAIFFGVFFLVVRNTNINRFIRYNAQQAIMLDLILIIPALF-------GGAAAQMPRFIAETGANTVFYSILAAVGYAVIENIRGELPNKIPLVSESVDSQIGPF 205          
BLAST of mRNA_S-ischiensis_contig8.19570.1 vs. uniprot
Match: A0A7S3WM08_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WM08_9SPIT)

HSP 1 Score: 125 bits (314), Expect = 6.510e-32
Identity = 70/151 (46.36%), Postives = 96/151 (63.58%), Query Frame = 0
Query:   81 ERTLSVLPYLLPALDGIDYGQYVYRAFPLFGDILYTFFAPELFIWRGIPFAPLVIFIGLTIVARQPS-LSRFTRFNIQQAILLDIALVVLGLLRDLSKFIGGAAAGELASNFIFYCVAFTVSYCVLENSKGVAPNQIPVISQAADMQVGPF 230
            ER  + LPY LP +DG  YG YV+   P   +   T   P +  +  +PFA ++ FIGL++  R  S LSRF RFNIQQA++LDI L+V  L   LS  I  + A  + SNF+FY +A  VSY ++ N +G  P+Q+PVIS+AAD+Q+GPF
Sbjct:   80 ERVFATLPYFLPFIDGFQYGIYVFNNVPGGLEFAKTVL-PFVIAFNSLPFAGIITFIGLSVFTRPSSGLSRFVRFNIQQALVLDILLIVPSLFSSLSGAIPSSVA-IIGSNFVFYVMALVVSYALVSNVQGKLPDQVPVISEAADLQIGPF 228          
BLAST of mRNA_S-ischiensis_contig8.19570.1 vs. uniprot
Match: A0A7S0JI91_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JI91_9EUKA)

HSP 1 Score: 123 bits (309), Expect = 1.880e-31
Identity = 68/160 (42.50%), Postives = 97/160 (60.62%), Query Frame = 0
Query:   71 LQSDDQVSLRERTLSVLPYLLPALDGIDYGQYVYRAFPLFGDILYTFFAPELFIWRGIPFAPLVIFIGLTIVARQPSLSRFTRFNIQQAILLDIALVVLGLLRDLSKFIGGAAAGELASNFIFYCVAFTVSYCVLENSKGVAPNQIPVISQAADMQVGPF 230
            L +D      +R    LPYLLP+LDG  YG Y+Y+  P          AP + +++ +PFA LV+FIGL+   R   LSR  RFNIQQA+LLDIAL++ GL   ++  +  A    + +N +FY   FTV Y    N++G  P+Q+P++S+AA MQ+GPF
Sbjct:   46 LSADPPAPAVDRLFGTLPYLLPSLDGFGYGAYIYQNVPGAAQAAGAV-APFVALFQSLPFAGLVLFIGLSFFTRNAGLSRLVRFNIQQALLLDIALIIPGLFSPVTGLLP-AELQIIGTNLVFYVCLFTVLYATWCNAQGKLPDQVPLLSEAALMQIGPF 203          
BLAST of mRNA_S-ischiensis_contig8.19570.1 vs. uniprot
Match: R1BZE0_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BZE0_EMIHU)

HSP 1 Score: 118 bits (296), Expect = 4.600e-30
Identity = 65/152 (42.76%), Postives = 95/152 (62.50%), Query Frame = 0
Query:   81 ERTLSVLPYLLPALDGIDYGQYVYRAFPLFGDILYT-FFAPELFIWRGIPFAPLVIFIGLTIVARQPS-LSRFTRFNIQQAILLDIALVVLGLLRDLSKFIGGAAAGELASNFIFYCVAFTVSYCVLENSKGVAPNQIPVISQAADMQVGPF 230
            ER  + LPY+LP LDG  YG YV+   P  G + +     P +  +  +PF+ ++ FIGL+   R  S LSRF RFNIQQA++LDI L++  L    +  +  + A  L SNF+FY +A  V+Y +  N++G  P+Q+PVIS+AA +Q+GPF
Sbjct:    9 ERVFATLPYVLPFLDGFQYGLYVFNNVP--GGVGFAEAVLPLVVAFNSLPFSGIIFFIGLSFFTRPDSGLSRFVRFNIQQALVLDILLIIPSLFSGAAGMVPSSVA-ILGSNFVFYTMALVVTYALYSNARGELPDQVPVISEAAGLQIGPF 157          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19570.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YUZ7_9STRA4.870e-4039.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G3C5_ECTSI8.910e-3848.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4ES88_CHRCT3.230e-3748.72Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A6H5LCJ5_9PHAE3.820e-3648.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2XVV7_9STRA5.210e-3541.51Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0PYH6_9EUKA4.010e-3442.95Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S2ZG79_9RHOD4.520e-3341.77Tic20 family protein Ycf60 n=2 Tax=Rhodosorus mari... [more]
A0A7S3WM08_9SPIT6.510e-3246.36Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
A0A7S0JI91_9EUKA1.880e-3142.50Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
R1BZE0_EMIHU4.600e-3042.76Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005691Chloroplast protein import component Tic20PFAMPF16166TIC20coord: 82..223
e-value: 3.0E-17
score: 63.0
IPR005691Chloroplast protein import component Tic20PANTHERPTHR33510FAMILY NOT NAMEDcoord: 66..227
NoneNo IPR availablePANTHERPTHR33510:SF5PROTEIN TIC 20-II, CHLOROPLASTICcoord: 66..227
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..122
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 143..153
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 123..142
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 154..172
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 173..177
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 206..230
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 178..205
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.877
NoneNo IPR availableTMHMMTMhelixcoord: 122..144
NoneNo IPR availableTMHMMTMhelixcoord: 183..205
NoneNo IPR availableTMHMMTMhelixcoord: 151..173
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:2245624..2247945 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19570.1mRNA_S-ischiensis_contig8.19570.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 2244849..2248008 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19570.1 ID=prot_S-ischiensis_contig8.19570.1|Name=mRNA_S-ischiensis_contig8.19570.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=231bp
MPRPVLLTSLALALTVAGTSAFVQPAVPRCVPRGVGVNPCRSRTSIARIG
SGAGGSRARPARSNGSGGLRLQSDDQVSLRERTLSVLPYLLPALDGIDYG
QYVYRAFPLFGDILYTFFAPELFIWRGIPFAPLVIFIGLTIVARQPSLSR
FTRFNIQQAILLDIALVVLGLLRDLSKFIGGAAAGELASNFIFYCVAFTV
SYCVLENSKGVAPNQIPVISQAADMQVGPF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005691Tic20