prot_S-ischiensis_contig8.19566.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19566.1
Unique Nameprot_S-ischiensis_contig8.19566.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length260
Homology
BLAST of mRNA_S-ischiensis_contig8.19566.1 vs. uniprot
Match: D8LSC4_ECTSI (U2 small nuclear ribonucleoprotein A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC4_ECTSI)

HSP 1 Score: 250 bits (639), Expect = 2.130e-77
Identity = 135/230 (58.70%), Postives = 175/230 (76.09%), Query Frame = 0
Query:    1 MRLTADLILHARASINPCNERELDLRGYKIPMIENLGATQDQFDTLDLSDNEVQKVDNFGRTRRLSSVLLNNNHVSKIGADLGGQVPNLTTLVLTGNKVKMLSEIDGLASCTKLELLSLCENPVAREPNYRLYVINKMPSLKLLDYRKVTIQERQKAARLFASDAGRAMARDVERRATEARTADAVEKAARE--LTPAQLEVYEQLINKSTSLEEVERLKKRIKAGLAPN 228
            MRLTAD+I+HARASINPC+ERELDLRGYKIPMIENLG TQDQFD +D SDNE++K+DNF R +RLSS+LL NNHVSKI  DLG  +PNL+ L+LT NK+  L+E+ GL +CTKL +LSL  N V  +  YRLY+IN +PSLK LD++KVT++ER+ A RL  S AG+AM +DV ++A +A+T      AA E  LT     +Y   I K+T++EE+E L K+I+AG+ P+
Sbjct:    1 MRLTADIIMHARASINPCDERELDLRGYKIPMIENLGVTQDQFDAMDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSKISEDLGTALPNLSCLILTNNKLSTLAELKGLGTCTKLTMLSLLHNEVVNKQYYRLYMINLIPSLKQLDFQKVTVKERESAVRLARSQAGQAMIQDVAQQAEKAKTFTPGAPAAEEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPS 230          
BLAST of mRNA_S-ischiensis_contig8.19566.1 vs. uniprot
Match: A0A7S3XKJ1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKJ1_HETAK)

HSP 1 Score: 231 bits (589), Expect = 1.690e-70
Identity = 128/231 (55.41%), Postives = 169/231 (73.16%), Query Frame = 0
Query:    1 MRLTADLILHARASINPCNERELDLRGYKIPMIENLGATQDQFDTLDLSDNEVQKVDNFGRTRRLSSVLLNNNHVSKIGADLGGQVPNLTTLVLTGNKVKMLSEIDGLASCTKLELLSLCENPVAREPNYRLYVINKMPSLKLLDYRKVTIQERQKAARLFASDAGRAMARDVERRATEARTADAVEKAARE---LTPAQLEVYEQLINKSTSLEEVERLKKRIKAGLAPN 228
            MRLTAD+IL A A+INPC ERELDLRGYKIP+IEN+GATQD FDT+D SDNE++K++NF R  RL+++L NNNH+SKI   +  QVPNL+TL     +++ L+E+D L    KL LLSL ENPV R  +YRLYVI++ P+LK LD+RKV  QERQ+AARLF S AG+ M  DV++   E +T  A EK  RE   LT  Q  +  + I  +T+ EEV++L++++KAG+ PN
Sbjct:    1 MRLTADVILRADATINPCKERELDLRGYKIPVIENVGATQDMFDTIDFSDNEIKKLENFPRMERLTTLLFNNNHISKIAESIKDQVPNLSTLXXXXXRIQHLAELDSLQGLRKLTLLSLLENPVVRRQHYRLYVIHRCPALKYLDFRKVKQQERQEAARLFKSKAGQQMQDDVQK---EIKTFQAGEKQEREKKRLTEDQKNLIREAIKNATTPEEVDKLERQLKAGIMPN 228          
BLAST of mRNA_S-ischiensis_contig8.19566.1 vs. uniprot
Match: A0A835ZE59_9STRA (Leucine-rich repeat-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE59_9STRA)

HSP 1 Score: 226 bits (576), Expect = 1.060e-67
Identity = 129/240 (53.75%), Postives = 173/240 (72.08%), Query Frame = 0
Query:    1 MRLTADLILHARASINPCNERELDLRGYKIPMIENLGATQDQFDTLDLSDNEVQKVDNFGRTRRLSSVLLNNNHVSKIGADLGGQVPNLTTLVLTGNKVKMLSEIDGLASCTKLELLSLCENPVAREPNYRLYVINKMPSLKLLDYRKVTIQERQKAARLFASDAGRAMARDVERRATEARTADAVEKAARELTPAQLEVYEQLINKSTSLEEVERLKKRIKAGLAP---NSADVAAAVA 237
            MRLTAD+IL ARAS+N   ERELDLRG+KIP+IEN+G TQDQFDT+D SDNE+QK+DNF R  RL+++LL+NN +++IG D+G ++PNL+ LVLT N + +LSE+D L  C +L +LSL ENPV R  +YRLYVI+K+PSLK LD+ KV  +ER +A RLF S AGRAM  D+   A +A+T      A   LTPAQ      +I ++ + EE++RL++ ++AG+ P      D AAA A
Sbjct:    1 MRLTADVILRARASLNALRERELDLRGHKIPIIENIGVTQDQFDTIDFSDNEIQKLDNFPRMTRLTTLLLSNNVIARIGQDIGKKLPNLSCLVLTNNHISVLSELDPLGYCQQLTMLSLLENPVTRAQHYRLYVIHKIPSLKALDFCKVKKEERARAERLFQSAAGRAMEEDI---ALQAKTFVPGGAARAPLTPAQRTQVIAMIQRAMTTEEIDRLERMLEAGIYPAERKELDAAAAAA 237          
BLAST of mRNA_S-ischiensis_contig8.19566.1 vs. uniprot
Match: A0A4D9D4U7_9STRA (SAP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4U7_9STRA)

HSP 1 Score: 210 bits (535), Expect = 6.180e-62
Identity = 119/229 (51.97%), Postives = 169/229 (73.80%), Query Frame = 0
Query:    1 MRLTADLILHARASINPCNERELDLRGYKIPMIENLGATQDQFDTLDLSDNEVQKVDNFGRTRRLSSVLLNNNHVSKIGADLGGQVPNLTTLVLTGNKVKMLSEIDGLASCTKLELLSLCENPVAREPNYRLYVINKMPSLKLLDYRKVTIQERQKAARLFASDAGR----AMARDVERRATEARTADAVEKAARELTPAQLEVYEQLINKSTSLEEVERLKKRIKAGL 225
            MR+TAD+++HARA +NP  ERELDLRG KIP+IENLG TQDQFDT+DLSDNE++++DNF R RRL ++LL NN +++ G+ LG Q+  L  LVLT NKV  LSEID LAS TKL  LSL +NPV R  +YRLY+++K+P L +LD++KV   ER+ A +LF S AG+    A+A + +  A E+ T  A EK  R +T  +  + + +I+K+T+ EE+ER++++++AG+
Sbjct:    1 MRITADVVVHARAFVNPVKERELDLRGLKIPLIENLGVTQDQFDTVDLSDNEIRRLDNFPRMRRLKTLLLCNNSIARFGSALGEQISELEALVLTNNKVASLSEIDHLASLTKLRHLSLVDNPVVRSLHYRLYILHKLPHLTVLDFQKVKADERRAAKKLFQSQAGQQHLSAIADEGKLLAAES-TGKAREK--RVMTEEEKRLAQAMIDKATTPEELERVERQLRAGI 226          
BLAST of mRNA_S-ischiensis_contig8.19566.1 vs. uniprot
Match: A0A7S2F7F7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F7F7_9STRA)

HSP 1 Score: 206 bits (525), Expect = 7.890e-61
Identity = 114/231 (49.35%), Postives = 161/231 (69.70%), Query Frame = 0
Query:    1 MRLTADLILHARASINPCNERELDLRGYKIPMIENLGATQDQFDTLDLSDNEVQKVDNFGRTRRLSSVLLNNNHVSKIGADLGGQVPNLTTLVLTGNKVKMLSEIDGLASCTKLELLSLCENPVAREPNYRLYVINKMPSLKLLDYRKVTIQERQKAARLFASDAGRAMARDV----ERRATEARTADAVEKAARELTPAQLEVYEQLINKSTSLEEVERLKKRIKAGLAP 227
            MRLT+D++L+A A +NPC+ERELDLRG KIP IEN+G TQD +DTLD +DNE++K++NF  T+RLS +LL+NNHV  I  ++  ++P+L TLVLT NK+  LSE+D LA+C  L  LSL  NPV R  +YR YVI+K+P LK+LD+ K+  +ERQ+A RLF S AG+ M  DV    E    EA TA        E+  AQ+      I  +++ +E++R+++++KAG+ P
Sbjct:    1 MRLTSDVLLNAHARLNPCSERELDLRGLKIPAIENIGVTQDLYDTLDFTDNEIKKLENFPNTKRLSCLLLSNNHVKIINPEISEKIPSLRTLVLTNNKITNLSEVDNLAACANLTELSLLSNPVIRRQHYRFYVISKLPQLKVLDFSKIKPKERQEAERLFRSAAGKLMQEDVLKSKEIETDEAETATHNMAQLNEVDRAQVRAA---IAAASTPQEIDRIERQLKAGILP 228          
BLAST of mRNA_S-ischiensis_contig8.19566.1 vs. uniprot
Match: A0A7S2WMG2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WMG2_9STRA)

HSP 1 Score: 197 bits (500), Expect = 4.590e-59
Identity = 111/229 (48.47%), Postives = 154/229 (67.25%), Query Frame = 0
Query:    1 MRLTADLILHARASINPCNERELDLRGYKIPMIENLGATQDQFDTLDLSDNEVQKVDNFGRTRRLSSVLLNNNHVSKIGADLGGQVPNLTTLVLTGNKVKMLSEIDGLASCTKLELLSLCENPVAREPNYRLYVINKMPSLKLLDYRKVTIQERQKAARLFASDAGRAMARDVERRA-TEARTADAVEKAARELTPAQLEVYEQLINKSTSLEEVERLKKRIKAGLAPN 228
            +RLTAD++ +  A INPC +RELD+RG K+P IEN+G T+DQ+DTLD SDNE++K++NF R  RLS++LLNNNH+++I   LG Q+ +L            LSE+D L  CTKL  LSL  NPVAR  +YRLYVI+K+PS+K+LD+ KV  QER  AARLF S AG+ M +DV+  A T     D         T  Q+     +I  +T+ EEV+R+++++KAG+ P+
Sbjct:    2 VRLTADVLQNCFARINPCLDRELDIRGLKVPAIENIGVTKDQYDTLDFSDNEIKKLENFPRFSRLSTLLLNNNHIARISPTLGEQLLSLQXXXXXXXXXXQLSEVDHLVGCTKLTTLSLVNNPVARRQHYRLYVIHKLPSVKVLDFSKVKPQERADAARLFKSAAGKLMQQDVDAEASTFTPGEDMPSNPMANFTEEQMAQVRAVIAAATTPEEVDRVERQLKAGIIPS 230          
BLAST of mRNA_S-ischiensis_contig8.19566.1 vs. uniprot
Match: A0A3B3QBN1_9TELE (Small nuclear ribonucleoprotein polypeptide A' n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3QBN1_9TELE)

HSP 1 Score: 197 bits (502), Expect = 1.000e-58
Identity = 111/230 (48.26%), Postives = 158/230 (68.70%), Query Frame = 0
Query:    1 MRLTADLILHARASINPCNERELDLRGYKIPMIENLGATQDQFDTLDLSDNEVQKVDNFGRTRRLSSVLLNNNHVSKIGADLGGQVPNLTTLVLTGNKVKMLSEIDGLASCTKLELLSLCENPVAREPNYRLYVINKMPSLKLLDYRKVTIQERQKAARLFASDAGRAMARDVERRATEARTADAVEKAARELT---PAQLEVYEQLINKSTSLEEVERLKKRIKAGLAP 227
            ++L+A+LI  A    NP  +RELDLRGYKIP++ENLGAT DQFDT+D S+NE++K+D F   RRL ++L+NNN + +IG DL   +PNL  L+LT N ++ L ++D LAS   L LLSL  NPV  + +YRLYVINK+P L++LD++KV ++ERQ+A ++F    G  +A+D+ +R T+  T  A  +A +  T   PA +E  +  I  +TSL EVERLK  ++AG  P
Sbjct:   13 VKLSAELIEQAAQYTNPIRDRELDLRGYKIPVLENLGATLDQFDTIDFSENEIRKLDGFPLLRRLKTLLMNNNRICRIGEDLEQSLPNLKELILTNNSIQELGDLDPLASIKSLTLLSLLRNPVTNKKHYRLYVINKIPQLRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIAKR-TKTFTPGANLQAEKRKTGPSPADVEAIKNAIASATSLAEVERLKGLLQAGQIP 241          
BLAST of mRNA_S-ischiensis_contig8.19566.1 vs. uniprot
Match: UPI001ED8687B (U2 small nuclear ribonucleoprotein A'-like n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8687B)

HSP 1 Score: 196 bits (498), Expect = 1.400e-58
Identity = 109/229 (47.60%), Postives = 158/229 (69.00%), Query Frame = 0
Query:    1 MRLTADLILHARASINPCNERELDLRGYKIPMIENLGATQDQFDTLDLSDNEVQKVDNFGRTRRLSSVLLNNNHVSKIGADLGGQVPNLTTLVLTGNKVKMLSEIDGLASCTKLELLSLCENPVAREPNYRLYVINKMPSLKLLDYRKVTIQERQKAARLFASDAGRAMARDVERRATEARTADAVEKAARELTPAQLEVYE--QLINKSTSLEEVERLKKRIKAGLAP 227
            ++LT +LI  +   INP  +RELDLRGYKIP+IENLGAT DQFDT+D SDN+++K+D F   +RL  +LLNNN + +I   L   +PNL +L+LTGN ++ L++ID LA+  KL  LSL  NPV  +P+YRLYV  K+P+L+LLD+RK+ ++ER++A  LF S  G+ M R++ ++A        +    +   PAQ +V +  + I +++SLEEVERL + +KAGL P
Sbjct:    2 VKLTPELIQQSLQYINPVKDRELDLRGYKIPVIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCLLLNNNRIVRIAESLETTLPNLESLILTGNSIQELADIDPLATLKKLTTLSLLHNPVTTQPHYRLYVAFKLPNLRLLDFRKIKMKEREEANTLFKSKRGKEMQREMAKKAKTFVPGAGLSDTPKPSGPAQEDVRKIREAIARASSLEEVERLNRLLKAGLVP 230          
BLAST of mRNA_S-ischiensis_contig8.19566.1 vs. uniprot
Match: UPI000875976A (U2 small nuclear ribonucleoprotein A' n=1 Tax=Anoplophora glabripennis TaxID=217634 RepID=UPI000875976A)

HSP 1 Score: 195 bits (496), Expect = 1.440e-58
Identity = 108/229 (47.16%), Postives = 155/229 (67.69%), Query Frame = 0
Query:    1 MRLTADLILHARASINPCNERELDLRGYKIPMIENLGATQDQFDTLDLSDNEVQKVDNFGRTRRLSSVLLNNNHVSKIGADLGGQVPNLTTLVLTGNKVKMLSEIDGLASCTKLELLSLCENPVAREPNYRLYVINKMPSLKLLDYRKVTIQERQKAARLFASDAGRAMARDVERRATEARTADAVEKAARE--LTPAQLEVYEQLINKSTSLEEVERLKKRIKAGLAP 227
            ++LTA+LI ++   INP  +RELDLRGY+IP IENLGAT DQFDT+D SDN+++K+D F   +RL  +LLNNN + +IG  L   +PNL +L+LTGN++  L +ID L S  KL  LSL  NPV  + +YRLYVI ++P LKLLD+RK+ ++ER +A  LF S  G+ M +++ +RA        +   A+   L+  ++      INK++SLEEVERL+K +++G  P
Sbjct:    2 VKLTAELIQNSMQYINPVKDRELDLRGYRIPEIENLGATGDQFDTVDFSDNDIRKLDGFPYLKRLKCLLLNNNRIVRIGEHLEEYIPNLESLILTGNQIADLGDIDPLVSLEKLTTLSLMHNPVTAKQHYRLYVIYRLPQLKLLDFRKIKLKERDEARTLFKSKKGKEMQKEISKRAKTFVPGGGINNIAKNKGLSDEEVRKIRDAINKASSLEEVERLQKILQSGQIP 230          
BLAST of mRNA_S-ischiensis_contig8.19566.1 vs. uniprot
Match: UPI00096B1E3E (probable U2 small nuclear ribonucleoprotein A' n=1 Tax=Aethina tumida TaxID=116153 RepID=UPI00096B1E3E)

HSP 1 Score: 194 bits (494), Expect = 2.720e-58
Identity = 108/230 (46.96%), Postives = 157/230 (68.26%), Query Frame = 0
Query:    1 MRLTADLILHARASINPCNERELDLRGYKIPMIENLGATQDQFDTLDLSDNEVQKVDNFGRTRRLSSVLLNNNHVSKIGADLGGQVPNLTTLVLTGNKVKMLSEIDGLASCTKLELLSLCENPVAREPNYRLYVINKMPSLKLLDYRKVTIQERQKAARLFASDAGRAMARDVERRATEART-ADAVEKAARELTPA-QLEVYEQLINKSTSLEEVERLKKRIKAGLAPN 228
            ++LTA+LI ++   INP  +RELDLRGY+IP IENLGAT DQFDT+D S+N+++K+D F   +RL  +LLNNN + ++G  L   +PNL +L+LTGN +  L +ID L +   L  LSL  NPV  E NYRLYVI K+P L+LLD+RK+ ++ER++A  LF S  G+   +++  R+    T  D +EK  +   P+ ++    + INK++SLEEVERL+K ++AG  P+
Sbjct:    2 VKLTAELIQNSMQYINPVKDRELDLRGYRIPEIENLGATGDQFDTIDFSENDIRKLDGFPYLKRLKCLLLNNNRIVRLGEHLEEYIPNLESLILTGNHIDELGDIDPLVTLENLTTLSLLHNPVTAEANYRLYVIFKLPQLRLLDFRKIRMKEREEAKALFRSKKGKESLKEISNRSLNKGTNEDTLEKRVQNGPPSHEVRKIREAINKASSLEEVERLQKLLQAGQLPD 231          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19566.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSC4_ECTSI2.130e-7758.70U2 small nuclear ribonucleoprotein A n=1 Tax=Ectoc... [more]
A0A7S3XKJ1_HETAK1.690e-7055.41Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835ZE59_9STRA1.060e-6753.75Leucine-rich repeat-domain-containing protein n=1 ... [more]
A0A4D9D4U7_9STRA6.180e-6251.97SAP domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S2F7F7_9STRA7.890e-6149.35Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2WMG2_9STRA4.590e-5948.47Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A3B3QBN1_9TELE1.000e-5848.26Small nuclear ribonucleoprotein polypeptide A' n=2... [more]
UPI001ED8687B1.400e-5847.60U2 small nuclear ribonucleoprotein A'-like n=1 Tax... [more]
UPI000875976A1.440e-5847.16U2 small nuclear ribonucleoprotein A' n=1 Tax=Anop... [more]
UPI00096B1E3E2.720e-5846.96probable U2 small nuclear ribonucleoprotein A' n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..175
e-value: 3.4E-43
score: 148.6
NoneNo IPR availablePFAMPF14580LRR_9coord: 2..173
e-value: 1.8E-65
score: 219.7
NoneNo IPR availablePANTHERPTHR10552U2 SMALL NUCLEAR RIBONUCLEOPROTEIN Acoord: 1..235
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 6..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:2234121..2236954 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19566.1mRNA_S-ischiensis_contig8.19566.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 2234121..2237107 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19566.1 ID=prot_S-ischiensis_contig8.19566.1|Name=mRNA_S-ischiensis_contig8.19566.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=260bp
MRLTADLILHARASINPCNERELDLRGYKIPMIENLGATQDQFDTLDLSD
NEVQKVDNFGRTRRLSSVLLNNNHVSKIGADLGGQVPNLTTLVLTGNKVK
MLSEIDGLASCTKLELLSLCENPVAREPNYRLYVINKMPSLKLLDYRKVT
IQERQKAARLFASDAGRAMARDVERRATEARTADAVEKAARELTPAQLEV
YEQLINKSTSLEEVERLKKRIKAGLAPNSADVAAAVAEGNGNANSAALNG
NGATVAAAAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf