prot_S-ischiensis_contig8.19526.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19526.1
Unique Nameprot_S-ischiensis_contig8.19526.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length245
Homology
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BLAST of mRNA_S-ischiensis_contig8.19526.1 vs. uniprot
Match: A0A6H5JHC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC2_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 2.420e-20
Identity = 53/127 (41.73%), Postives = 58/127 (45.67%), Query Frame = 0 
Query:   23 AGYKMTLRTAGVREFHFLPLHSSWPLDAPESMFEAISTAAPAAXXXXXXXAAGDPGPLGHSTSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNKDGAAVGLPVFVCVPGWHEPGHDPRHIWGGL 149
            AGYKMT RTAGV+EFHFLPLH+ WPLD+PESMFE  S                                                                 GLPVF+CVPGWHEPGHDPRHIWGG+
Sbjct:  566 AGYKMTRRTAGVQEFHFLPLHTEWPLDSPESMFEGASE---------------------------------------------------------------PGLPVFICVPGWHEPGHDPRHIWGGI 629
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19526.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JHC2_9PHAE2.420e-2041.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007941Protein of unknown function DUF726PANTHERPTHR17920UNCHARACTERIZEDcoord: 1..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:1949819..1951246 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19526.1mRNA_S-ischiensis_contig8.19526.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 1949819..1951246 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19526.1 ID=prot_S-ischiensis_contig8.19526.1|Name=mRNA_S-ischiensis_contig8.19526.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=245bp
AAAAAAGEAAFSALCGVGGAGVAGYKMTLRTAGVREFHFLPLHSSWPLDA
PESMFEAISTAAPAAAATAAAKAAGDPGPLGHSTSGGGGDGGGGDSGYAA
AAGVGDDTEEEDVGGGDNKDGAAVGLPVFVCVPGWHEPGHDPRHIWGGLG
CCAPAAAPLPLPSSGPPPPHPSPAPAGAAVAAAAAGVSETSPTPIAATAA
AATPMSSSSSSKGAPSSSPAGQGPARGHRPAAVDMPAASLRVGTG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007941DUF726