prot_S-ischiensis_contig8.19515.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19515.1
Unique Nameprot_S-ischiensis_contig8.19515.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length128
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig8.19515.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 209 bits (533), Expect = 4.660e-68
Identity = 111/121 (91.74%), Postives = 118/121 (97.52%), Query Frame = 0 
Query:    6 GKGKGGRGDKKSTTRSAKAGLQFPVGRIGRYLKQGRYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGTVTIASGGVLPNIHAVLLPKKSSKK 126
            GKGKGGRG KKSTTRSAKAGLQFPVGR+GR+LK+G+YA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKK+RIIPRHIQLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKK+ KK
Sbjct:    3 GKGKGGRG-KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 122
[Close]
BLAST of mRNA_S-ischiensis_contig8.19515.1 vs. uniprot
Match: B7FWQ2_PHATC (Histone H2A n=9 Tax=Bacillariophyta TaxID=2836 RepID=B7FWQ2_PHATC)

HSP 1 Score: 209 bits (533), Expect = 5.310e-68
Identity = 110/123 (89.43%), Postives = 118/123 (95.93%), Query Frame = 0 
Query:    1 MSGKGGKGKGGRGDKKSTTRSAKAGLQFPVGRIGRYLKQGRYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGTVTIASGGVLPNIHAVLLPKKS 123
            MSGKG KGKGGRGDKKSTT SAKAGLQFPVGRIGRYL+QG+YATR+GAGAPVYLAAVLEYL AE+LELAGNAARDNKKSRI+PRHI LAV+NDEELNKLLG VTIA+GGVLPNIHA+LLPKKS
Sbjct:    1 MSGKG-KGKGGRGDKKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIAAGGVLPNIHAILLPKKS 122
[Close]
BLAST of mRNA_S-ischiensis_contig8.19515.1 vs. uniprot
Match: A0A448ZH28_9STRA (Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 RepID=A0A448ZH28_9STRA)

HSP 1 Score: 209 bits (532), Expect = 6.630e-68
Identity = 107/120 (89.17%), Postives = 115/120 (95.83%), Query Frame = 0 
Query:    6 GKGKGGRGDKKSTTRSAKAGLQFPVGRIGRYLKQGRYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGTVTIASGGVLPNIHAVLLPKKSSK 125
            GKGKGGRG+KKSTT SAKAGLQFPVGRIGRYL+QG+YATR+GAGAPVYLAAVLEYL AE+LELAGNAARDNKKSRI+PRHI LAV+NDEELNKLLG VTIASGGVLPNIHA+LLPKKS K
Sbjct:    3 GKGKGGRGEKKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAILLPKKSGK 122
[Close]
BLAST of mRNA_S-ischiensis_contig8.19515.1 vs. uniprot
Match: A0A6U2JFS4_9STRA (Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U2JFS4_9STRA)

HSP 1 Score: 209 bits (531), Expect = 9.410e-68
Identity = 108/120 (90.00%), Postives = 115/120 (95.83%), Query Frame = 0 
Query:    6 GKGKGGRGDKKSTTRSAKAGLQFPVGRIGRYLKQGRYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGTVTIASGGVLPNIHAVLLPKKSSK 125
            GKGKGGRG KKSTT SAKAGLQFPVGRIGRYL+QG+YATR+GAGAPVYLAAVLEYL AE+LELAGNAARDNKKSRI+PRHI LAV+NDEELNKLLG VTIASGGVLPNIHAVLLPKKS+K
Sbjct:    3 GKGKGGRGGKKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKSAK 122
[Close]
BLAST of mRNA_S-ischiensis_contig8.19515.1 vs. uniprot
Match: A0A6U3UCP9_9STRA (Histone H2A n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3UCP9_9STRA)

HSP 1 Score: 208 bits (529), Expect = 4.590e-67
Identity = 108/120 (90.00%), Postives = 115/120 (95.83%), Query Frame = 0 
Query:    6 GKGKGGRGDKKSTTRSAKAGLQFPVGRIGRYLKQGRYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGTVTIASGGVLPNIHAVLLPKKSSK 125
            GKGK GRG+KKSTT SAKAGLQFPVGRIGRYL+QG+YATR+GAGAPVYLAAVLEYL AE+LELAGNAARDNKKSRI+PRHI LAV+NDEELNKLLG VTIASGGVLPNIHAVLLPKKSSK
Sbjct:   30 GKGKEGRGEKKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKSSK 149
[Close]
BLAST of mRNA_S-ischiensis_contig8.19515.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 207 bits (526), Expect = 9.800e-67
Identity = 108/127 (85.04%), Postives = 119/127 (93.70%), Query Frame = 0 
Query:    1 MSGKGGKGKGGRGDKKSTTRSAKAGLQFPVGRIGRYLKQGRYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGTVTIASGGVLPNIHAVLLPKKSSKKA 127
            M GKG KGKGGRGDKK+ ++SAKAGLQFPVGR+GR+LKQGRYA RVGAGAPVY+AAV+EYL AEVLEL+GNAARDNKKSRIIPRHIQLAVRNDEELNKLLG VTIA+GGVLPNIHAVLLPKK+  K+
Sbjct:    1 MGGKG-KGKGGRGDKKAVSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKKTRSKS 126
[Close]
BLAST of mRNA_S-ischiensis_contig8.19515.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 1.180e-66
Identity = 110/119 (92.44%), Postives = 116/119 (97.48%), Query Frame = 0 
Query:    6 GKGKGGRGDKKSTTRSAKAGLQFPVGRIGRYLKQGRYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGTVTIASGGVLPNIHAVLLPKKSS 124
            GKGKGGRG KKST++S+KAGLQFPV RIGRYLK+G+YATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKK+RIIPRHIQLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKKSS
Sbjct:    3 GKGKGGRG-KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSS 120
[Close]
BLAST of mRNA_S-ischiensis_contig8.19515.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 1.580e-66
Identity = 110/120 (91.67%), Postives = 117/120 (97.50%), Query Frame = 0 
Query:    6 GKGKGGRGDKKSTTRSAKAGLQFPVGRIGRYLKQGRYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGTVTIASGGVLPNIHAVLLPKKSSK 125
            GKGKGGRG KKSTTRSAKAGLQFPVGR+GR+LK+G+YA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKK+RIIPRHIQLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKK+ K
Sbjct:   48 GKGKGGRG-KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 166
[Close]
BLAST of mRNA_S-ischiensis_contig8.19515.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 206 bits (525), Expect = 6.050e-66
Identity = 110/119 (92.44%), Postives = 116/119 (97.48%), Query Frame = 0 
Query:    6 GKGKGGRGDKKSTTRSAKAGLQFPVGRIGRYLKQGRYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGTVTIASGGVLPNIHAVLLPKKSS 124
            GKGKGGRG KKST++S+KAGLQFPV RIGRYLK+G+YATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKK+RIIPRHIQLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKKSS
Sbjct:   54 GKGKGGRG-KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSS 171
[Close]
BLAST of mRNA_S-ischiensis_contig8.19515.1 vs. uniprot
Match: K0S6I8_THAOC (Uncharacterized protein n=3 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S6I8_THAOC)

HSP 1 Score: 209 bits (531), Expect = 5.350e-65
Identity = 108/120 (90.00%), Postives = 115/120 (95.83%), Query Frame = 0 
Query:    6 GKGKGGRGDKKSTTRSAKAGLQFPVGRIGRYLKQGRYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGTVTIASGGVLPNIHAVLLPKKSSK 125
            GKGKGGRG+KKSTT SAKAGLQFPVGRIGRYL+QG+YATR+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHI LAV+NDEELNKLLG VTIASGGVLPNIHAVLLPKKS K
Sbjct:    3 GKGKGGRGEKKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKARIIPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKSGK 122
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19515.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI9_ECTSI4.660e-6891.74Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
B7FWQ2_PHATC5.310e-6889.43Histone H2A n=9 Tax=Bacillariophyta TaxID=2836 Rep... [more]
A0A448ZH28_9STRA6.630e-6889.17Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 Re... [more]
A0A6U2JFS4_9STRA9.410e-6890.00Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 Rep... [more]
A0A6U3UCP9_9STRA4.590e-6790.00Histone H2A n=1 Tax=Ditylum brightwellii TaxID=492... [more]
A0A835ZLE9_9STRA9.800e-6785.04Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A6H5KG79_9PHAE1.180e-6692.44Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7G193_ECTSI1.580e-6691.67Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D7FVQ5_ECTSI6.050e-6692.44Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
K0S6I8_THAOC5.350e-6590.00Uncharacterized protein n=3 Tax=Thalassiosira ocea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 102..120
score: 75.94
coord: 45..60
score: 90.36
coord: 60..73
score: 90.54
coord: 74..88
score: 78.35
coord: 16..38
score: 68.82
IPR002119Histone H2ASMARTSM00414h2a4coord: 5..125
e-value: 2.6E-81
score: 286.1
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 94..127
e-value: 9.2E-21
score: 73.3
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 11..91
e-value: 7.9E-16
score: 58.6
IPR009072Histone-foldGENE3D1.10.20.10coord: 4..127
e-value: 5.2E-63
score: 212.5
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 6..125
NoneNo IPR availablePANTHERPTHR23430:SF234coord: 9..127
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 9..127
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 24..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:1877798..1878181 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19515.1mRNA_S-ischiensis_contig8.19515.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 1877798..1878181 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19515.1 ID=prot_S-ischiensis_contig8.19515.1|Name=mRNA_S-ischiensis_contig8.19515.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=128bp
MSGKGGKGKGGRGDKKSTTRSAKAGLQFPVGRIGRYLKQGRYATRVGAGA
PVYLAAVLEYLTAEVLELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLL
GTVTIASGGVLPNIHAVLLPKKSSKKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR032454Histone_H2A_C
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold
IPR032458Histone_H2A_CS