prot_S-ischiensis_contig8.19378.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19378.1
Unique Nameprot_S-ischiensis_contig8.19378.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length333
Homology
BLAST of mRNA_S-ischiensis_contig8.19378.1 vs. uniprot
Match: A0A6H5JAK5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAK5_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 4.720e-43
Identity = 99/244 (40.57%), Postives = 138/244 (56.56%), Query Frame = 0
Query:   86 IFFASGVVTILALVPSTIVFGGAGYLTSIALDDTPTAEVFGIACGLAFVTFAVGATLAFALGHTVMR-SCARKFIRHFQVLQGIDAAIRHKGITTNILLRVNPVVPSNCLNYALGLTGSSLCAYVMGFIGTLPYLCVVVYAGMLLEDPSSLDDLTNLLEDHSSGAWIAVYVALGVFCLLSLWLMWRYVMAEMDAIMDH------GRRIDASIH-------ETQFGTFSASRPGDGVTERSELLG 315
            IF   G ++I+ L+P T++F  AGY  +  L +   A  F +A  L+ VTF +GA++AF L  +V+  SC RKF +HF +L+G+D A++HKG     LLR+NP+ P N LNY LGL+  +  AY+ G +G  P+ C+ VYAGML+   SS+DD+ +L    S+G W  VY ALGV C++S   + RY  AEM A +        G R+D            T FGTF         T RSE  G
Sbjct:    7 IFIVFGALSIVMLLPQTVLFLAAGYACADRLRNQYLA--FAVALNLSLVTFIIGASIAFLLARSVLPPSCTRKFFKHFAILEGLDHALQHKGRRIIFLLRINPMSPYNALNYGLGLSSCTFRAYLQGMVGAFPFTCIAVYAGMLI---SSVDDIDSLFTYTSTG-WYCVYAALGVACVVSFVAIVRYTSAEMKAAVRSAPRPAGGDRVDGEEEFGELPPDSTMFGTF---------TSRSECYG 235          
BLAST of mRNA_S-ischiensis_contig8.19378.1 vs. uniprot
Match: A0A7V7SX93_9BACT (TVP38/TMEM64 family membrane protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V7SX93_9BACT)

HSP 1 Score: 72.8 bits (177), Expect = 3.590e-11
Identity = 50/134 (37.31%), Postives = 69/134 (51.49%), Query Frame = 0
Query:  138 VGATLAFALGHTVMRSCARKFIRHFQVLQGIDAAIRHKGITTNILLRVNPVVPSNCLNYALGLTGSSLCAYVMG-FIGTLPYLCVVVYAGMLLEDPSSLDDLTNLLEDHSSGA---WIAVYVALGVFCLLSLWL 267
            +GATLAF L  + +RS     I      Q +D A+  +G    +L R++PV P   LNYA GLT  SL AYV G F+G +P   + VY G  +ED + L       E  ++G    W+ +   LGV    +LWL
Sbjct:   84 LGATLAFLLARSFLRSSVEAKIAAKPRFQALDQAVAEQGFKLLVLTRLSPVFPFVVLNYAFGLTRISLLAYVFGSFLGMIPGTLLYVYLGSTVEDVTQLGQ--GAPEGSTAGQILKWVGLAATLGV----TLWL 211          
BLAST of mRNA_S-ischiensis_contig8.19378.1 vs. uniprot
Match: A0A7S2F3C7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F3C7_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 7.900e-10
Identity = 50/190 (26.32%), Postives = 90/190 (47.37%), Query Frame = 0
Query:  100 PSTIVFGGAGYLTSIALDDTPTAEVFGIACGL--AFVTFAVGATLAFALGHTVMRSCARKFIRHFQVLQGIDAAIRHKGITTNILLRVNPVVPSNCLNYALGLTGSSLCAYVMGFIGTLPYLCVVVYAGMLLEDPSSLDDLTNLLEDHSSGAWIAVYVALG--VFCLLSLWLMWRYVMAEMDAIMDHGRR 285
            P T+   GAGY+ S     T      GI  G   ++V    G  +   +   ++RS A K  +    L  +D A+   G   N LLR+ PV+P+N LN+ LG+T ++   Y  G+ G LP++    Y G      S ++++T++ +  +    + ++   G  V  L ++ L+ R+  A ++  +   R+
Sbjct:   27 PGTLPAIGAGYMFSHKYGTTG-----GIILGSFSSYVGSVCGGLIVMMITRHMLRSWAIKLFQKQGRLSTLDRALSQAGYKLNFLLRLQPVIPTNVLNFMLGVTNTTYIEYSFGYFGLLPWIAFCAYVG------SGVNNMTDVSKHEAMNRKMYIFAFAGSAVLLLAAIILISRHAQAVIEQALSQARK 205          
BLAST of mRNA_S-ischiensis_contig8.19378.1 vs. uniprot
Match: A0A2J0LD48_9BACT (TVP38/TMEM64 family membrane protein (Fragment) n=1 Tax=Candidatus Omnitrophica bacterium CG12_big_fil_rev_8_21_14_0_65_50_5 TaxID=1974754 RepID=A0A2J0LD48_9BACT)

HSP 1 Score: 54.3 bits (129), Expect = 4.980e-5
Identity = 57/213 (26.76%), Postives = 90/213 (42.25%), Query Frame = 0
Query:   48 IGGLGYIVYDFSTSEYILTATIELYTWLNGEDFEILAPIFFASGVVTILALVPSTIVFGGAGYLTSIALDDTPTAEVFGIACGLAFVTFA--VGATLAFALGHTVMRSCARKFIRHFQVLQGIDAAIRHKGITTNILLRVNPVVPSNCLNYALGLTGSSLCAYVMG-FIGTLPYLCVVVYAGMLLEDPSSLDDLTNLLEDHSSGAWIAVYVAL 257
            IGG+ Y+V   ++      A +    W+  + +   AP  F       + L  ST     AG +  +A        +FG+  G   + F   + AT+ F +          K I      + IDAAI   G     +LR+ P++ SN +NYA GLT   L  Y+MG  +G+ P   +  Y G L+ D + +    +     S+  W  V V+L
Sbjct:   16 IGGIVYVVLHSNSQARFTDALV----WIKTQGWR--APALF-------VLLFLST-----AGIVMPVAFLVVAAGILFGVFQGTLIILFCTLLSATILFLIARKAGCGNISKTIEANPKFKAIDAAIAKSGWKIVAMLRLVPILNSNLINYACGLTRIHLKNYLMGTLLGSFPAAVLYTYIGFLIGDIAKMHAQNS---GRSAMEWALVIVSL 207          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JAK5_9PHAE4.720e-4340.57Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7V7SX93_9BACT3.590e-1137.31TVP38/TMEM64 family membrane protein n=1 Tax=Planc... [more]
A0A7S2F3C7_9STRA7.900e-1026.32Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A2J0LD48_9BACT4.980e-526.76TVP38/TMEM64 family membrane protein (Fragment) n=... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032816SNARE associated Golgi proteinPFAMPF09335SNARE_assoccoord: 100..226
e-value: 1.8E-12
score: 47.8
IPR015414Transmembrane protein TMEM64PANTHERPTHR12677UNCHARACTERIZEDcoord: 42..285
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 230..248
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 270..332
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 106..124
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 249..269
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 60..79
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 125..147
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 205..229
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 148..204
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..59
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 80..105
NoneNo IPR availableTMHMMTMhelixcoord: 82..104
NoneNo IPR availableTMHMMTMhelixcoord: 37..56
NoneNo IPR availableTMHMMTMhelixcoord: 205..227
NoneNo IPR availableTMHMMTMhelixcoord: 247..269
NoneNo IPR availableTMHMMTMhelixcoord: 124..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:1040739..1045992 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19378.1mRNA_S-ischiensis_contig8.19378.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 1040651..1047448 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19378.1 ID=prot_S-ischiensis_contig8.19378.1|Name=mRNA_S-ischiensis_contig8.19378.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=333bp
MSAGDEPLLSPTSDRSERDDVGPKGPFRCCYDDVDMGCAQLLFLILFIGG
LGYIVYDFSTSEYILTATIELYTWLNGEDFEILAPIFFASGVVTILALVP
STIVFGGAGYLTSIALDDTPTAEVFGIACGLAFVTFAVGATLAFALGHTV
MRSCARKFIRHFQVLQGIDAAIRHKGITTNILLRVNPVVPSNCLNYALGL
TGSSLCAYVMGFIGTLPYLCVVVYAGMLLEDPSSLDDLTNLLEDHSSGAW
IAVYVALGVFCLLSLWLMWRYVMAEMDAIMDHGRRIDASIHETQFGTFSA
SRPGDGVTERSELLGRAPAPTAQAGTSSPVDV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032816SNARE_assoc
IPR015414TMEM64