prot_S-ischiensis_contig8.19361.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19361.1
Unique Nameprot_S-ischiensis_contig8.19361.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length61
Homology
BLAST of mRNA_S-ischiensis_contig8.19361.1 vs. uniprot
Match: A0A6H5JNQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNQ3_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 4.790e-17
Identity = 38/63 (60.32%), Postives = 47/63 (74.60%), Query Frame = 0
Query:    1 MSYQNRSKLGKTFAKMTSACPQEIALYGRCLQAK--AAEVEKNACQEEFLALKRCFRKAVSEL 61
            MS QNRSK+G+ FAKMT+ACPQ+IA YG CLQA   A  +E+  C E+F ALKRCF++A   L
Sbjct:    1 MSSQNRSKMGQAFAKMTTACPQQIAGYGTCLQAASTAGMLERGVCDEQFKALKRCFQQAAKGL 63          
BLAST of mRNA_S-ischiensis_contig8.19361.1 vs. uniprot
Match: A0A0Q3TL47_AMAAE (Uncharacterized protein n=2 Tax=Amazona TaxID=12929 RepID=A0A0Q3TL47_AMAAE)

HSP 1 Score: 52.8 bits (125), Expect = 1.190e-7
Identity = 23/48 (47.92%), Postives = 33/48 (68.75%), Query Frame = 0
Query:   11 KTFAKMTSACPQEIALYGRCLQAKAAEVEKNACQEEFLALKRCFRKAV 58
            + F  + S C ++ A YGRC+ A AAE+ ++AC EEF AL+ CF +AV
Sbjct:   15 RRFPALLSGCGEQAAAYGRCVAAAAAELRRDACLEEFRALRDCFARAV 62          
BLAST of mRNA_S-ischiensis_contig8.19361.1 vs. uniprot
Match: A0A672UT23_STRHB (NADH:ubiquinone oxidoreductase complex assembly factor 8 n=1 Tax=Strigops habroptila TaxID=2489341 RepID=A0A672UT23_STRHB)

HSP 1 Score: 48.9 bits (115), Expect = 5.570e-6
Identity = 24/52 (46.15%), Postives = 34/52 (65.38%), Query Frame = 0
Query:   11 KTFAKMTSACPQEIALYGRCLQAKAA---EVEKNACQEEFLALKRCFRKAVS 59
            + F  + S C ++ A YGRC+ A AA   E+ ++AC EEF AL+ CF +AVS
Sbjct:   15 RRFPALLSGCGEQAAAYGRCVAAAAAGPAELRRDACLEEFRALRDCFARAVS 66          
BLAST of mRNA_S-ischiensis_contig8.19361.1 vs. uniprot
Match: A0A7K9BHU9_DRONO (NDUF8 factor (Fragment) n=4 Tax=Palaeognathae TaxID=8783 RepID=A0A7K9BHU9_DRONO)

HSP 1 Score: 45.8 bits (107), Expect = 5.470e-5
Identity = 21/51 (41.18%), Postives = 33/51 (64.71%), Query Frame = 0
Query:   11 KTFAKMTSACPQEIALYGRCLQAKAA---EVEKNACQEEFLALKRCFRKAV 58
            + F ++ + C ++ A YGRC+   +A   E+ ++AC EEF ALK CF +AV
Sbjct:   15 RRFPELLAGCGEQAAAYGRCVATASAGSTELRRDACAEEFRALKDCFARAV 65          
BLAST of mRNA_S-ischiensis_contig8.19361.1 vs. uniprot
Match: A0A7L3PTK5_9DEND (NDUF8 factor (Fragment) n=2 Tax=Passeriformes TaxID=9126 RepID=A0A7L3PTK5_9DEND)

HSP 1 Score: 45.4 bits (106), Expect = 7.750e-5
Identity = 22/51 (43.14%), Postives = 32/51 (62.75%), Query Frame = 0
Query:   11 KTFAKMTSACPQEIALYGRCLQAKAA---EVEKNACQEEFLALKRCFRKAV 58
            + F    +AC  + A YGRC+ A AA   E+ ++AC +EF AL+ CF +AV
Sbjct:   15 RRFPAALAACGDQAAAYGRCVAAAAAGPAELRRDACLQEFRALRECFARAV 65          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19361.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JNQ3_9PHAE4.790e-1760.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0Q3TL47_AMAAE1.190e-747.92Uncharacterized protein n=2 Tax=Amazona TaxID=1292... [more]
A0A672UT23_STRHB5.570e-646.15NADH:ubiquinone oxidoreductase complex assembly fa... [more]
A0A7K9BHU9_DRONO5.470e-541.18NDUF8 factor (Fragment) n=4 Tax=Palaeognathae TaxI... [more]
A0A7L3PTK5_9DEND7.750e-543.14NDUF8 factor (Fragment) n=2 Tax=Passeriformes TaxI... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034595NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 8PANTHERPTHR34561FAMILY NOT NAMEDcoord: 3..59
NoneNo IPR availablePROSITEPS51808CHCHcoord: 17..61
score: 12.839

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:933862..934188 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19361.1mRNA_S-ischiensis_contig8.19361.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 933862..934188 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19361.1 ID=prot_S-ischiensis_contig8.19361.1|Name=mRNA_S-ischiensis_contig8.19361.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=61bp
MSYQNRSKLGKTFAKMTSACPQEIALYGRCLQAKAAEVEKNACQEEFLAL
KRCFRKAVSEL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034595NDUFAF8