prot_S-ischiensis_contig8.19359.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19359.1
Unique Nameprot_S-ischiensis_contig8.19359.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length83
Homology
BLAST of mRNA_S-ischiensis_contig8.19359.1 vs. uniprot
Match: D8LEU3_ECTSI (Trafficking protein particle complex subunit 2-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEU3_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 1.170e-13
Identity = 31/55 (56.36%), Postives = 41/55 (74.55%), Query Frame = 0
Query:    1 MIVCLGVIGRQNDPLFIRCYTDKESDDVDDTTLRLHRIVHSSLDIIHEHRGELNG 55
            MIVC+ +IGRQN+PLF+R YTD E ++ +D  LRLH IVHSSLD++ E +    G
Sbjct:    1 MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVVGERKVGRKG 55          
BLAST of mRNA_S-ischiensis_contig8.19359.1 vs. uniprot
Match: A0A2G9G9G6_9LAMI (Uncharacterized protein n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9G9G6_9LAMI)

HSP 1 Score: 51.2 bits (121), Expect = 9.250e-7
Identity = 25/48 (52.08%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    1 MIVCLGVIGRQNDPLFIRCYTDKESDDVDDTTLRLHRIVHSSLDIIHE 48
            MIVC+ V+G QN+PL+I+ +T  E+DD     L+LH IVH SLD+++E
Sbjct:    1 MIVCIAVVGHQNNPLYIQSFT--EADDA----LKLHHIVHCSLDVVNE 42          
BLAST of mRNA_S-ischiensis_contig8.19359.1 vs. uniprot
Match: A0A0K9P169_ZOSMR (Trafficking protein particle complex subunit n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9P169_ZOSMR)

HSP 1 Score: 52.8 bits (125), Expect = 1.070e-6
Identity = 25/48 (52.08%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    1 MIVCLGVIGRQNDPLFIRCYTDKESDDVDDTTLRLHRIVHSSLDIIHE 48
            MIVC+ VIG+QN+PLF++ +T ++ D      L+LH IVH SLD+I E
Sbjct:    1 MIVCVAVIGQQNNPLFLQSFTQEDDD------LKLHHIVHCSLDVIDE 42          
BLAST of mRNA_S-ischiensis_contig8.19359.1 vs. uniprot
Match: A0A250XA77_9CHLO (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XA77_9CHLO)

HSP 1 Score: 52.4 bits (124), Expect = 1.300e-6
Identity = 27/47 (57.45%), Postives = 32/47 (68.09%), Query Frame = 0
Query:    2 IVCLGVIGRQNDPLFIRCYTDKESDDVDDTTLRLHRIVHSSLDIIHE 48
            IVCL +IG+QN+PLFI+ Y + E D      LRLH IVH SLD I E
Sbjct:    3 IVCLAIIGQQNNPLFIKTYPEAEQD----KELRLHLIVHCSLDAIEE 45          
BLAST of mRNA_S-ischiensis_contig8.19359.1 vs. uniprot
Match: A0A6A3BN44_HIBSY (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3BN44_HIBSY)

HSP 1 Score: 51.6 bits (122), Expect = 1.500e-6
Identity = 24/48 (50.00%), Postives = 33/48 (68.75%), Query Frame = 0
Query:    1 MIVCLGVIGRQNDPLFIRCYTDKESDDVDDTTLRLHRIVHSSLDIIHE 48
            MIVC+ V+G QN+PL+I+ +TD       D  L+LH IVH SLD++ E
Sbjct:    1 MIVCVAVVGHQNNPLYIQSFTDA------DDALKLHHIVHCSLDVVDE 42          
BLAST of mRNA_S-ischiensis_contig8.19359.1 vs. uniprot
Match: A0A0D2PKN1_GOSRA (Trafficking protein particle complex subunit 2-like protein n=5 Tax=rosids TaxID=71275 RepID=A0A0D2PKN1_GOSRA)

HSP 1 Score: 51.6 bits (122), Expect = 1.530e-6
Identity = 24/48 (50.00%), Postives = 33/48 (68.75%), Query Frame = 0
Query:    1 MIVCLGVIGRQNDPLFIRCYTDKESDDVDDTTLRLHRIVHSSLDIIHE 48
            MIVC+ V+G QN+PL+I+ +TD       D  L+LH IVH SLD++ E
Sbjct:    1 MIVCVAVVGHQNNPLYIQSFTDA------DDALKLHHIVHCSLDVVDE 42          
BLAST of mRNA_S-ischiensis_contig8.19359.1 vs. uniprot
Match: A0A0D2RD17_GOSRA (Trafficking protein particle complex subunit 2-like protein n=3 Tax=malvids TaxID=91836 RepID=A0A0D2RD17_GOSRA)

HSP 1 Score: 51.6 bits (122), Expect = 1.730e-6
Identity = 24/48 (50.00%), Postives = 33/48 (68.75%), Query Frame = 0
Query:    1 MIVCLGVIGRQNDPLFIRCYTDKESDDVDDTTLRLHRIVHSSLDIIHE 48
            MIVC+ V+G QN+PL+I+ +TD       D  L+LH IVH SLD++ E
Sbjct:    1 MIVCVAVVGHQNNPLYIQSFTDA------DDALKLHHIVHCSLDVVDE 42          
BLAST of mRNA_S-ischiensis_contig8.19359.1 vs. uniprot
Match: A0A2P2J3T0_RHIMU (Uncharacterized protein n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2J3T0_RHIMU)

HSP 1 Score: 50.1 bits (118), Expect = 1.750e-6
Identity = 25/48 (52.08%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    1 MIVCLGVIGRQNDPLFIRCYTDKESDDVDDTTLRLHRIVHSSLDIIHE 48
            MIVC+ V+G QN+PL+I+ +T  E+DD     L+LH IVH SLD++ E
Sbjct:    1 MIVCVAVVGHQNNPLYIQSFT--EADDA----LKLHHIVHCSLDVVDE 42          
BLAST of mRNA_S-ischiensis_contig8.19359.1 vs. uniprot
Match: A0A078CXU5_BRANA (Trafficking protein particle complex subunit 2-like protein n=8 Tax=Brassiceae TaxID=981071 RepID=A0A078CXU5_BRANA)

HSP 1 Score: 52.0 bits (123), Expect = 1.900e-6
Identity = 24/48 (50.00%), Postives = 33/48 (68.75%), Query Frame = 0
Query:    1 MIVCLGVIGRQNDPLFIRCYTDKESDDVDDTTLRLHRIVHSSLDIIHE 48
            MIVC+ V+G QN+PL+I+ +TD       D  L+LH +VH SLD+I E
Sbjct:    1 MIVCVSVVGHQNNPLYIQSFTDA------DDALKLHHVVHCSLDVIEE 42          
BLAST of mRNA_S-ischiensis_contig8.19359.1 vs. uniprot
Match: A0A438DSU1_VITVI (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438DSU1_VITVI)

HSP 1 Score: 50.1 bits (118), Expect = 1.910e-6
Identity = 25/48 (52.08%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    1 MIVCLGVIGRQNDPLFIRCYTDKESDDVDDTTLRLHRIVHSSLDIIHE 48
            MIVC+ V+G QN+PL+I+ +T  E+DD     L+LH IVH SLD++ E
Sbjct:    1 MIVCVAVVGHQNNPLYIQSFT--EADDA----LKLHHIVHCSLDVVDE 42          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19359.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEU3_ECTSI1.170e-1356.36Trafficking protein particle complex subunit 2-lik... [more]
A0A2G9G9G6_9LAMI9.250e-752.08Uncharacterized protein n=1 Tax=Handroanthus impet... [more]
A0A0K9P169_ZOSMR1.070e-652.08Trafficking protein particle complex subunit n=1 T... [more]
A0A250XA77_9CHLO1.300e-657.45Trafficking protein particle complex subunit 2-lik... [more]
A0A6A3BN44_HIBSY1.500e-650.00Trafficking protein particle complex subunit 2-lik... [more]
A0A0D2PKN1_GOSRA1.530e-650.00Trafficking protein particle complex subunit 2-lik... [more]
A0A0D2RD17_GOSRA1.730e-650.00Trafficking protein particle complex subunit 2-lik... [more]
A0A2P2J3T0_RHIMU1.750e-652.08Uncharacterized protein n=1 Tax=Rhizophora mucrona... [more]
A0A078CXU5_BRANA1.900e-650.00Trafficking protein particle complex subunit 2-lik... [more]
A0A438DSU1_VITVI1.910e-652.08Trafficking protein particle complex subunit 2-lik... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.450.70coord: 1..70
e-value: 3.4E-10
score: 41.3
IPR006722Trafficking protein particle complex subunit 2PFAMPF04628Sedlin_Ncoord: 7..52
e-value: 6.5E-6
score: 26.3
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 2..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:908034..908420 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19359.1mRNA_S-ischiensis_contig8.19359.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 907847..908534 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19359.1 ID=prot_S-ischiensis_contig8.19359.1|Name=mRNA_S-ischiensis_contig8.19359.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=83bp
MIVCLGVIGRQNDPLFIRCYTDKESDDVDDTTLRLHRIVHSSLDIIHEHR
GELNGRLVARQLLLPSLPAVHITSVQSPRPLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006722Sedlin
IPR011012Longin-like_dom_sf