prot_S-ischiensis_contig8.19340.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19340.1
Unique Nameprot_S-ischiensis_contig8.19340.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length137
Homology
BLAST of mRNA_S-ischiensis_contig8.19340.1 vs. uniprot
Match: A0A4D9DC50_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DC50_9STRA)

HSP 1 Score: 107 bits (266), Expect = 5.500e-26
Identity = 57/135 (42.22%), Postives = 87/135 (64.44%), Query Frame = 0
Query:    2 YQTSSKGVIQAVAAGDAVAFINAVDGLSKAGEGHDGGVGFIFRGAYLMAAPWPIQNVRKALDLFGRALQVEPASKRNNYYGGLARLALGDYKDAAMLFQKSLESPCAS--ATERDVAGFLGEQARRGLEAAEEAL 134
            Y+TSSKG+++A   GD + F+  VD +      +D GV FIFRGA+L+AAPWP+++V KA++ F  A +VEP S RNN++ G++    G ++ A   F++++     S  ATE DVA FL  ++RR LE  +E +
Sbjct:   99 YRTSSKGILKAAVTGDGLTFMRLVDQIVSHHPTYDAGVPFIFRGAFLLAAPWPLRDVPKAVEAFESAWKVEPRSLRNNFFLGVSHFHAGSFEAARQAFERAVGKDVESVAATEVDVAEFLRRESRRSLEVTKERI 233          
BLAST of mRNA_S-ischiensis_contig8.19340.1 vs. uniprot
Match: W7TSV1_9STRA (Arginine-trna-protein transferase 1-like protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSV1_9STRA)

HSP 1 Score: 105 bits (263), Expect = 8.000e-25
Identity = 56/135 (41.48%), Postives = 86/135 (63.70%), Query Frame = 0
Query:    2 YQTSSKGVIQAVAAGDAVAFINAVDGLSKAGEGHDGGVGFIFRGAYLMAAPWPIQNVRKALDLFGRALQVEPASKRNNYYGGLARLALGDYKDAAMLFQKSLESPCAS--ATERDVAGFLGEQARRGLEAAEEAL 134
            Y+TSSKG+++A   GD + F+  VD +      +D GV FIFRGA+L+AAPWP+++V KA++ F  A +VEP S RNN++ G++    G ++ A   F++++     S  ATE DVA F   ++RR LE  +E +
Sbjct:  185 YRTSSKGILKAAVTGDGLTFMRLVDQIVSRHPTYDAGVPFIFRGAFLLAAPWPLRDVPKAVEAFESAWEVEPRSLRNNFFLGVSHFHAGSFEAARQAFERAVGKDVESVAATEVDVAEFFRRESRRSLEMTKERI 319          
BLAST of mRNA_S-ischiensis_contig8.19340.1 vs. uniprot
Match: A0A7S2BPF7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BPF7_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.070e-20
Identity = 52/123 (42.28%), Postives = 72/123 (58.54%), Query Frame = 0
Query:    5 SSKGVIQAVAAGDAVAFINAVDGLSKAGEGHDGGVGFIFRGAYLMAAPWPIQNVRKALDLFGRALQVEPASKRNNYYGGLARLALGDYKDAAMLFQKSLESPCASATERDVAGFLGEQARRGL 127
            SSKG+I+   +GD      AVD L    E +D GV +IF G+  +A P PI++  KA   F +A  +   S RN Y+  LA +  G  K AA LFQ+SL++P  S ++RD+  FL EQA+ GL
Sbjct:    4 SSKGLIRVATSGDLPKLEKAVDDLRDIDETYDNGVAWIFAGSNYLALPRPIKSADKARVRFRKAQGISSDSPRNLYFSALAAMEAGSVKQAAKLFQRSLDAPAVSTSDRDLEAFLREQAKAGL 126          
BLAST of mRNA_S-ischiensis_contig8.19340.1 vs. uniprot
Match: A0A7S3AVZ1_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AVZ1_9EUKA)

HSP 1 Score: 75.5 bits (184), Expect = 3.870e-14
Identity = 44/133 (33.08%), Postives = 68/133 (51.13%), Query Frame = 0
Query:    1 MYQTSSKGVIQAVAAGDAVAFINAVDGLSKAGEGHDGGVGFIFRGAYLMAAPWPIQNVRKALDLFGRALQVEPASKRNNYYGGLARLALGDYKDAAMLFQKSLESPCASATERDVAGFLGEQARRGLEAAEEA 133
            +Y  S+KG+++    G  V ++   + L    + HD  V   + G +   APWP+ N+ + L     ALQ+EP S+RNNYY  L +   GD+  AA   + +L + C   +E+D   FL +Q  R L  A  A
Sbjct:   73 LYANSAKGIVRQAFTGAGVEYLRLANYLVDHYKAHDSAVSLCYLGGFYAVAPWPLGNMPRGLADMMAALQIEPKSRRNNYYVCLLQYKNGDFSSAAASCKAALRANCIG-SEKDYCDFLTDQVHRILYLASSA 204          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19340.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A4D9DC50_9STRA5.500e-2642.22Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TSV1_9STRA8.000e-2541.48Arginine-trna-protein transferase 1-like protein n... [more]
A0A7S2BPF7_9STRA1.070e-2042.28Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3AVZ1_9EUKA3.870e-1433.08Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 17..136
e-value: 2.7E-5
score: 26.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 55..104
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 57..109
score: 8.553

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:799803..803798 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19340.1mRNA_S-ischiensis_contig8.19340.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 799077..803861 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19340.1 ID=prot_S-ischiensis_contig8.19340.1|Name=mRNA_S-ischiensis_contig8.19340.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=137bp
MYQTSSKGVIQAVAAGDAVAFINAVDGLSKAGEGHDGGVGFIFRGAYLMA
APWPIQNVRKALDLFGRALQVEPASKRNNYYGGLARLALGDYKDAAMLFQ
KSLESPCASATERDVAGFLGEQARRGLEAAEEALRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom