prot_S-ischiensis_contig8.19309.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19309.1
Unique Nameprot_S-ischiensis_contig8.19309.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length213
Homology
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BLAST of mRNA_S-ischiensis_contig8.19309.1 vs. uniprot
Match: D7FKS0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKS0_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 1.470e-26
Identity = 77/181 (42.54%), Postives = 104/181 (57.46%), Query Frame = 0 
Query:    1 MYEAMAAEGGMSAEHTAVVEVLARISRYRDALRLTCDAGEGVLSGLVGTGHSSNANSFKEVFRRARAAAAGTPAAPMAVTVTKPPETVVVFLPPLLAAQPPHAEQGSDMAPSGAPWLLFDSHPRTQLGITRAYVKSFESESQLLDWLDLLFPALGXXXXXXXXXXMMAQMYNMFDATPLQL 181
            MYEA+AA G ++ EHT+V E+LA ++RY DAL+   D  +    GL+G+  +S A    E+    R       + P+AV +TKPPETVV FLP    A+   A  G   APS   WLLFDSHPR Q G+  A V+ F +E  L++ L+ +FPA+           +M+ MYNMFD  PL L
Sbjct:   70 MYEAVAATGTLAVEHTSVAEILATVARYHDALQPATD--KVTHQGLLGS-DTSIARVLGEIRGERR-----DQSRPVAVVITKPPETVVCFLPAESQAEGGAATTG---APSTRQWLLFDSHPRPQHGLVGASVRCFAAEEALVEALNDIFPAVDLGTDS-----VMSSMYNMFDCVPLSL 234
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19309.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKS0_ECTSI1.470e-2642.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:491541..494863 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19309.1mRNA_S-ischiensis_contig8.19309.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 489675..496784 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19309.1 ID=prot_S-ischiensis_contig8.19309.1|Name=mRNA_S-ischiensis_contig8.19309.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=213bp
MYEAMAAEGGMSAEHTAVVEVLARISRYRDALRLTCDAGEGVLSGLVGTG
HSSNANSFKEVFRRARAAAAGTPAAPMAVTVTKPPETVVVFLPPLLAAQP
PHAEQGSDMAPSGAPWLLFDSHPRTQLGITRAYVKSFESESQLLDWLDLL
FPALGGGGGGEEEEDMMAQMYNMFDATPLQLTAVSGSDGGRGGGGGGTAA
ATVADENAASVT*
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