prot_S-ischiensis_contig79.19148.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig79.19148.1
Unique Nameprot_S-ischiensis_contig79.19148.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length145
Homology
BLAST of mRNA_S-ischiensis_contig79.19148.1 vs. uniprot
Match: A0A1Y1IS99_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IS99_KLENI)

HSP 1 Score: 105 bits (261), Expect = 1.680e-23
Identity = 59/142 (41.55%), Postives = 84/142 (59.15%), Query Frame = 0
Query:    3 IVVWVDDCVVTGVVQAKIQQVERSLKVRFDIEDLGTATYLLGMHISHDRSAHTLNLSQTKYAGDILKRFNMHNCNGSSTP-GDFSNMTLELDPVEAEDTHTYREMVGSLLFLARCARPDIAFPVMKLSRAMQAPGKAHMGAA 143
            ++VWVDD +V      +I +V+  L  ++D+ DLG ATY LGM ++ DR A TL L+Q K  G++L R  +      S P G    +T E +P++    H Y E++GSLL+L+ C RPDIA  V  L+R   AP +AH  AA
Sbjct:  417 LIVWVDDILVAARGAERIAKVKAHLAEKYDVRDLGEATYFLGMELARDRVARTLKLTQKKLTGELLGRHGLAGARARSVPLGAGKKLTREGEPLDTARFH-YSELIGSLLYLSVCTRPDIAHAVGSLARYTSAPTEAHWAAA 557          
BLAST of mRNA_S-ischiensis_contig79.19148.1 vs. uniprot
Match: A0A6A2XCT0_HIBSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2XCT0_HIBSY)

HSP 1 Score: 100 bits (248), Expect = 4.980e-23
Identity = 56/143 (39.16%), Postives = 89/143 (62.24%), Query Frame = 0
Query:    2 IIVVWVDDCVVTGVVQAKIQQVERSLKVRFDIEDLGTATYLLGMHISHDRSAHTLNLSQTKYAGDILKRFNMHNCNGSSTPGDFSNMTLELDPVEAEDTHTYREMVGSLLFLARCARPDIAFPVMKLSRAMQAPGKAHMGAAK 144
            I++V+VDD ++TG  +A+I+Q + +L VRF +++L    + LG+ +  DR+   + L Q KYA D+LKRF M  C  +STP + +      +  + ED   YR++VGSL++L    RPDI++ V  +SR MQ P K H+ A +
Sbjct:   62 IVLVYVDDLIITGNDEAEIRQTKENLSVRFQMKELRQLKHFLGLEV--DRTHEGIFLCQQKYAKDLLKRFRMLECKSTSTPMELNVKMCAHEGKDLEDATMYRQLVGSLIYLT-LTRPDISYAVGVMSRYMQNPKKPHLDAVR 201          
BLAST of mRNA_S-ischiensis_contig79.19148.1 vs. uniprot
Match: A0A507DKM5_9FUNG (DNA-directed DNA polymerase (Fragment) n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DKM5_9FUNG)

HSP 1 Score: 101 bits (252), Expect = 7.950e-23
Identity = 58/148 (39.19%), Postives = 82/148 (55.41%), Query Frame = 0
Query:    5 VWVDDCVVTGVVQAKIQQVERSLKVRFDIEDLGTATYLLGMHISHDRSAHTLNLSQTKYAGDILKRFNMHNCNGSSTPGDFSNMTLELDPVEAEDTHT--------YREMVGSLLFLARCARPDIAFPVMKLSRAMQAPGKAHMGAAK 144
            V+VDD ++    +++I  ++ SL   F++ DLG   + LGM +  D S H + L Q  Y  DIL+RF M +C   +TP D      +L+P E E+T T        YR++VGSL++L  C RPDIA  V  LSR    P   H+ AAK
Sbjct:   50 VYVDDLLIFAKTKSEISSIKTSLHNEFNMTDLGEVNHYLGMRVRRDYSRHVIYLDQESYVNDILERFGMQDCKPVNTPMD----RTKLEPYEVENTKTSPNPQEGEYRKIVGSLVYLMICTRPDIAVAVSMLSRFASNPSPQHLQAAK 193          
BLAST of mRNA_S-ischiensis_contig79.19148.1 vs. uniprot
Match: A0A6H5JV83_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV83_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 4.150e-22
Identity = 56/141 (39.72%), Postives = 87/141 (61.70%), Query Frame = 0
Query:    1 VIIVVWVDDCVVTGVVQAKIQQVERSLKVRFDIEDLGTATYLLGMHISHDRSAHTLNLSQTKYAGDILKRFNMHNCNGSSTPGDFSNMT-LELDPVEAEDTHTYREMVGSLLFLARCARPDIAFPVMKLSRAMQAPGKAHM 140
            V+++V+VDD ++TG  + K+  +   L  RF+  DLG A +LLGM I+ DR+A T+ L Q  Y   +L +F M +   +++P +   ++ LE + + AEDT  +R   GSLL+L+RC RPDI   V+ L+R+M  PG   M
Sbjct:  545 VLLLVYVDDILLTGEGENKVLSIVNQLNERFETVDLGGARFLLGMRINRDRAAGTILLEQEAYTNAVLDKFGMADARPTTSPSEAGPVSVLEDEVLSAEDTTYFRSATGSLLYLSRCTRPDITHSVVVLTRSMAKPGPRAM 685          
BLAST of mRNA_S-ischiensis_contig79.19148.1 vs. uniprot
Match: A0A6A3A2M5_HIBSY (Integrase catalytic domain-containing protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3A2M5_HIBSY)

HSP 1 Score: 100 bits (250), Expect = 5.830e-22
Identity = 57/143 (39.86%), Postives = 89/143 (62.24%), Query Frame = 0
Query:    2 IIVVWVDDCVVTGVVQAKIQQVERSLKVRFDIEDLGTATYLLGMHISHDRSAHTLNLSQTKYAGDILKRFNMHNCNGSSTPGDFSNMTLELDPVEAEDTHTYREMVGSLLFLARCARPDIAFPVMKLSRAMQAPGKAHMGAAK 144
            I++V+VDD ++TG  +A+I Q + +L VRF +++LG   + LG+ +  DR+   + L Q KYA D+LKRF M  C  +STP + +      +  + ED   YR++VGSL++L    RPDI++ V  +SR MQ P K H+ A +
Sbjct:  866 IVLVYVDDLIITGDNEAEILQTKENLSVRFQMKELGQLKHFLGLEV--DRTHEGIFLCQQKYAKDLLKRFGMLECKSTSTPMEPNIKMCAYEGKDLEDATMYRQLVGSLIYLT-LTRPDISYAVGVMSRYMQNPKKPHLEAVR 1005          
BLAST of mRNA_S-ischiensis_contig79.19148.1 vs. uniprot
Match: A0A6A3CH52_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3CH52_HIBSY)

HSP 1 Score: 100 bits (250), Expect = 5.910e-22
Identity = 57/143 (39.86%), Postives = 90/143 (62.94%), Query Frame = 0
Query:    2 IIVVWVDDCVVTGVVQAKIQQVERSLKVRFDIEDLGTATYLLGMHISHDRSAHTLNLSQTKYAGDILKRFNMHNCNGSSTPGDFSNMTLELDPVEAEDTHTYREMVGSLLFLARCARPDIAFPVMKLSRAMQAPGKAHMGAAK 144
            I++V+VDD ++TG  +A+I Q + +L VRF +++LG   + LG+ +  DR+   + L Q KYA D+LKRF M  C  +STP + +      +  + ED   YR++VGSL++L    RPDI++ V  +SR MQ P K+H+ A +
Sbjct: 1235 IVLVYVDDLIITGDDEAEILQTKENLSVRFQMKELGQLKHFLGLEV--DRTHEGIFLCQQKYAKDLLKRFGMLECKSTSTPMEPNIKMCAHEGKDLEDATMYRQLVGSLIYLT-LTRPDISYAVGVMSRYMQNPKKSHLEAVR 1374          
BLAST of mRNA_S-ischiensis_contig79.19148.1 vs. uniprot
Match: A0A6A3BLV8_HIBSY (Integrase catalytic domain-containing protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3BLV8_HIBSY)

HSP 1 Score: 100 bits (250), Expect = 6.010e-22
Identity = 56/143 (39.16%), Postives = 88/143 (61.54%), Query Frame = 0
Query:    2 IIVVWVDDCVVTGVVQAKIQQVERSLKVRFDIEDLGTATYLLGMHISHDRSAHTLNLSQTKYAGDILKRFNMHNCNGSSTPGDFSNMTLELDPVEAEDTHTYREMVGSLLFLARCARPDIAFPVMKLSRAMQAPGKAHMGAAK 144
            I++V+VDD ++TG  +A+I Q + +L VRF +++LG   + LG+ + H      + L Q KYA D+LKRF M  C  +STP + +      +  + ED   YR++VGSL++L    RPDI++ V  +SR MQ P K+H+ A +
Sbjct: 1685 IVLVYVDDLIITGDDEAEILQTKENLSVRFQMKELGQLKHFLGLEVDHTHEG--IFLCQQKYAKDLLKRFEMLECKSTSTPMEPNIKMCAHEGKDLEDATMYRQLVGSLIYLT-LTRPDISYAVGVMSRYMQNPKKSHLEAVR 1824          
BLAST of mRNA_S-ischiensis_contig79.19148.1 vs. uniprot
Match: A0A6H5K4G1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4G1_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 7.720e-22
Identity = 58/141 (41.13%), Postives = 85/141 (60.28%), Query Frame = 0
Query:    1 VIIVVWVDDCVVTGVVQAKIQQVERSLKVRFDIEDLGTATYLLGMHISHDRSAHTLNLSQTKYAGDILKRFNMHNCNGSSTPGDFSNMT-LELDPVEAEDTHTYREMVGSLLFLARCARPDIAFPVMKLSRAMQAPGKAHM 140
            V+++V+VDD ++TG  + K+  +   L  RF+  DLG A +LLGM I+ DR+A T+ L Q  Y   +L +F M +   + +P D   ++ LE + + AEDT  +R   GSLL L+RC RPDI   VM L+R+M  PG   M
Sbjct:  555 VLLLVYVDDILLTGEGENKVLSIVDQLNERFETVDLGGARFLLGMGINRDRAAGTILLEQEAYTNVVLDKFGMADARPTKSPSDAGPVSVLEDEVLSAEDTTYFRSATGSLLHLSRCTRPDITHSVMVLTRSMAKPGPRAM 695          
BLAST of mRNA_S-ischiensis_contig79.19148.1 vs. uniprot
Match: UPI00124909F6 (uncharacterized protein LOC115986279 n=1 Tax=Quercus lobata TaxID=97700 RepID=UPI00124909F6)

HSP 1 Score: 98.6 bits (244), Expect = 1.060e-21
Identity = 57/139 (41.01%), Postives = 80/139 (57.55%), Query Frame = 0
Query:    6 WVDDCVVTGVVQAKIQQVERSLKVRFDIEDLGTATYLLGMHISHDRSAHTLNLSQTKYAGDILKRFNMHNCNGSSTPGDFSNMTLELDPVEAEDTHTYREMVGSLLFLARCARPDIAFPVMKLSRAMQAPGKAHMGAAK 144
            +VDD ++TG    +I  +  +L   FD++DLG   Y LG+ I+  +  + L LSQTKYA +IL RFNMHN   + TP   +        +   D  TYR MVG+L +L    RPD+AF V +L + MQ+P   H+ AAK
Sbjct:   18 YVDDIIITGNASTQIASLISALSTTFDLKDLGPLNYFLGIQITPTK--YGLTLSQTKYASEILHRFNMHNSKPTKTPCCSATRLTPDSGLRLSDPSTYRSMVGALQYLT-FTRPDLAFSVHQLCQFMQSPTTTHLEAAK 153          
BLAST of mRNA_S-ischiensis_contig79.19148.1 vs. uniprot
Match: A0A6A3D0Q9_HIBSY (PLAC8 family protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3D0Q9_HIBSY)

HSP 1 Score: 100 bits (248), Expect = 1.070e-21
Identity = 58/143 (40.56%), Postives = 88/143 (61.54%), Query Frame = 0
Query:    2 IIVVWVDDCVVTGVVQAKIQQVERSLKVRFDIEDLGTATYLLGMHISHDRSAHTLNLSQTKYAGDILKRFNMHNCNGSSTPGDFSNMTLELDPVEAEDTHTYREMVGSLLFLARCARPDIAFPVMKLSRAMQAPGKAHMGAAK 144
            I++V+VDD ++TG  +A+I Q + +L VRF I++LG   + LG+ +  DR    + L Q KYA D+LKRF M  C  +STP + +      +  + ED   YR++VGSL++L    RPDI++ V  +SR MQ P K H+ A +
Sbjct:  769 IVLVYVDDLIITGDDEAEILQTKENLSVRFQIKELGQVKHFLGLEV--DRIHEGIFLCQQKYAKDLLKRFGMLECKSTSTPMEPNVKMCAHEGKDLEDETMYRQLVGSLIYLT-LTRPDISYAVGVMSRYMQNPKKPHLEAVR 908          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig79.19148.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Y1IS99_KLENI1.680e-2341.55Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A6A2XCT0_HIBSY4.980e-2339.16Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A507DKM5_9FUNG7.950e-2339.19DNA-directed DNA polymerase (Fragment) n=1 Tax=Pow... [more]
A0A6H5JV83_9PHAE4.150e-2239.72Integrase catalytic domain-containing protein n=1 ... [more]
A0A6A3A2M5_HIBSY5.830e-2239.86Integrase catalytic domain-containing protein n=1 ... [more]
A0A6A3CH52_HIBSY5.910e-2239.86Uncharacterized protein n=1 Tax=Hibiscus syriacus ... [more]
A0A6A3BLV8_HIBSY6.010e-2239.16Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K4G1_9PHAE7.720e-2241.13Integrase catalytic domain-containing protein n=1 ... [more]
UPI00124909F61.060e-2141.01uncharacterized protein LOC115986279 n=1 Tax=Querc... [more]
A0A6A3D0Q9_HIBSY1.070e-2140.56PLAC8 family protein n=1 Tax=Hibiscus syriacus Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..82
e-value: 2.7E-13
score: 50.1
NoneNo IPR availablePANTHERPTHR11439:SF257coord: 5..144
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 5..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig79contigS-ischiensis_contig79:29266..29700 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig79.19148.1mRNA_S-ischiensis_contig79.19148.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig79 29266..29700 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig79.19148.1 ID=prot_S-ischiensis_contig79.19148.1|Name=mRNA_S-ischiensis_contig79.19148.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=145bp
VIIVVWVDDCVVTGVVQAKIQQVERSLKVRFDIEDLGTATYLLGMHISHD
RSAHTLNLSQTKYAGDILKRFNMHNCNGSSTPGDFSNMTLELDPVEAEDT
HTYREMVGSLLFLARCARPDIAFPVMKLSRAMQAPGKAHMGAAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like