prot_S-ischiensis_contig78.19088.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig78.19088.1
Unique Nameprot_S-ischiensis_contig78.19088.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length209
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig78.19088.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 69..89
NoneNo IPR availablePFAMPF13424TPR_12coord: 97..171
e-value: 7.4E-10
score: 39.0
coord: 11..81
e-value: 1.6E-11
score: 44.3
NoneNo IPR availablePANTHERPTHR46082FAMILY NOT NAMEDcoord: 10..193
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 96..129
e-value: 490.0
score: 0.1
coord: 140..173
e-value: 11.0
score: 14.6
coord: 11..44
e-value: 8.7
score: 15.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 7..207
e-value: 8.6E-28
score: 99.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 89..200
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 11..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig78contigS-ischiensis_contig78:354338..356863 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig78.19088.1mRNA_S-ischiensis_contig78.19088.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig78 354338..356879 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig78.19088.1 ID=prot_S-ischiensis_contig78.19088.1|Name=mRNA_S-ischiensis_contig78.19088.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=209bp
MSATMPSSVVIEALTGMAEALQEQGRLAEAREIWQEVSERDAALFGASHP
YAACSQLSVAGLCGRLGDVEQAEGLYRQAEATLARASGLGIHPQLPTALA
NHARLLVEQSRWHEAEALLRGALARWESLGMHGHPPHVGVVALNGLGCCL
AMRGEPDLAEPVLRRALRVCKLQASEGGDVTTADTLHNLSLVLGLVGDTD
GEEEGGRGT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf