prot_S-ischiensis_contig78.19082.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig78.19082.1
Unique Nameprot_S-ischiensis_contig78.19082.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length578
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig78.19082.1 vs. uniprot
Match: A0A835YJL9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJL9_9STRA)

HSP 1 Score: 188 bits (477), Expect = 7.230e-50
Identity = 122/375 (32.53%), Postives = 172/375 (45.87%), Query Frame = 0 
Query:  287 DVGNAIRSFVQGWSDLLNEANNQFDERSYVVFKNLQ-------------GKGDAVNPQLKAPPTMEMEFAELALAAPQEVFLSQPQVKTSRAEFEACVAARGQEVFPYFEKNRGGVGSIPMDPRNHDYFNFLTYCQWKEMAPQMKT-------------------RAQQTAFLDALGDTCLRTLMRDEDVITYEPRRTGGLLKVIEGCRRILQRFQSQGFMAKFNLQADLVDQTSFTDGGPAQFSLILSQEAPLGAKIFLDFEGYKY---------------FLPNHLPATVAAYLRSCGVSPT----------------------------------------YEQFYLDETYRPNVSDYTPSQTLIQWTLEEQ 574
            D+G  +R+ V+  +D+L E N + +E ++ + + LQ             G+ D   P+++ PP ++ EFA  A   P+ VF+   Q   S A   A V A   + FPYFE+  GG GS+P D RNH Y++F TY QW+     +KT                         F  A+G   L TL  D  +  Y+ R+ G L + + G RR+L RFQS G++  + LQ D +D  SFTDG P  F+L++  EAPL AKI LD+EGYK                 LP+ +   VA YLR+   +                                          +  +YLD+ YRP   DY P QTLI+WTLEEQ
Sbjct:   77 DIGELVRAKVKESNDVLIEGNRRLNEEAHFLGQRLQEEAYIWSRRVRGQGEQDIFPPRVQPPP-IDAEFASKAYQIPETVFVR--QTGRSAAAVRAAVEASQAKYFPYFERGAGGPGSLPTDLRNHTYYSFATYAQWRVFLADIKTPNAAAXXXXXXXXXXXXXXXXXXXXFSAAVGAEALSTLFADVPLKRYDARKDG-LGEALAGVRRLLDRFQSAGYIVGYKLQTDSIDAASFTDGAPCAFTLVVDLEAPLAAKIRLDYEGYKXXXXXXXXXXXXXXKMMLPDLVADAVAEYLRAAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVARFTSYYLDDAYRPRAEDYRPVQTLIEWTLEEQ 447
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig78.19082.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YJL9_9STRA7.230e-5032.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..577
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.728

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig78contigS-ischiensis_contig78:319010..323251 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig78.19082.1mRNA_S-ischiensis_contig78.19082.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig78 318688..323332 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig78.19082.1 ID=prot_S-ischiensis_contig78.19082.1|Name=mRNA_S-ischiensis_contig78.19082.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=578bp
MLHATAWFALAVPAWGLLPGNNAFLGPQSLPCAVVRPNSARPARGCSPLH
VARNGDSDAGDGGHTGSADVLSLQELDVPLQSSPDGYRDYVERECSGDGR
RVVRWHISSVDERSGLAKAEAVVLGPKAPEKASSRTQEVSSRTQAPTATP
MAPPAPVMGPAPAPGPSPGPGSVVESTGVPVEGQARSGATGGGTMQVGAS
LGRAAGESSPGLLHGGQRPAPPQPSPGSARDAAGTGGAGEMPLQPGRGLR
QGLSEAGQMRSRQDVLRLWAAGAPLALLLAWREDSDDVGNAIRSFVQGWS
DLLNEANNQFDERSYVVFKNLQGKGDAVNPQLKAPPTMEMEFAELALAAP
QEVFLSQPQVKTSRAEFEACVAARGQEVFPYFEKNRGGVGSIPMDPRNHD
YFNFLTYCQWKEMAPQMKTRAQQTAFLDALGDTCLRTLMRDEDVITYEPR
RTGGLLKVIEGCRRILQRFQSQGFMAKFNLQADLVDQTSFTDGGPAQFSL
ILSQEAPLGAKIFLDFEGYKYFLPNHLPATVAAYLRSCGVSPTYEQFYLD
ETYRPNVSDYTPSQTLIQWTLEEQDFR*
back to top