prot_S-ischiensis_contig78.19072.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig78.19072.1
Unique Nameprot_S-ischiensis_contig78.19072.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length192
Homology
BLAST of mRNA_S-ischiensis_contig78.19072.1 vs. uniprot
Match: A0A6H5JSR8_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR8_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 7.850e-26
Identity = 54/115 (46.96%), Postives = 70/115 (60.87%), Query Frame = 0
Query:   74 YVQEAIHKEVQYARKGQR--SLPPLKRKVVAFVEREHLIPEDFDMDHKFGPLSGTSHEERVLSAYMAGLLQPRPDRGNGSAAAAAVEVDGKWPVPQDRRMCFECGERGHFPRYCP 186
            +VQEAIHKEVQY+R+G    ++P     V  FV+   +IP +F+ DHKFGPLSG SHE RV+SA+MAG L+ R +   G                   +MC ECG +GHFPR+CP
Sbjct:   75 HVQEAIHKEVQYSREGNSKGNVPANTLAVFRFVKEAFVIPNNFEKDHKFGPLSGVSHELRVVSAFMAGQLEARTEEAKGGV-----------------KMCLECGAKGHFPRHCP 172          
BLAST of mRNA_S-ischiensis_contig78.19072.1 vs. uniprot
Match: A0A835Z875_9STRA (CCHC-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z875_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 4.140e-22
Identity = 53/113 (46.90%), Postives = 67/113 (59.29%), Query Frame = 0
Query:   74 YVQEAIHKEVQYARKGQRSLPPLKRKVVAFVEREHLIPEDFDMDHKFGPLSGTSHEERVLSAYMAGLLQPRPDRGNGSAAAAAVEVDGKWPVPQDRRMCFECGERGHFPRYCP 186
            YVQEA+HK+V Y  +G+  L P   KV AFV+    +P  FD  H++GPLSGTS EER++ A++ G LQP+  +G  SAA A              RMC ECGE GH  R CP
Sbjct:   65 YVQEALHKQVIYQTEGKAQLSPALAKVYAFVKENFDVPPMFDKRHRYGPLSGTSAEERLVVAFLDGQLQPK--QGRDSAAFA--------------RMCIECGEEGHRARDCP 161          
BLAST of mRNA_S-ischiensis_contig78.19072.1 vs. uniprot
Match: A0A7S1D6G7_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D6G7_CYCTE)

HSP 1 Score: 84.0 bits (206), Expect = 3.120e-17
Identity = 47/116 (40.52%), Postives = 62/116 (53.45%), Query Frame = 0
Query:   74 YVQEAIHKEVQYARKGQRSLPPLKRKVVAFVEREHLIPEDFDMDHKFGPLSGTSHEERVLSAYMAGLLQPR--PDRGNGSAAAAAVEVDGKWPVPQDRRMCFECGERGHFPRYCPS 187
            YV   IHK V Y R+G+ +L P  +K  A VE+  ++P DF+   K+GPLSGTS EERV++AY  GLLQP+  P+  +G      VE+            C  C   GH    CP 
Sbjct:   48 YVPTYIHKNVLYLRRGEAALSPQTQKTFALVEQHFVVPRDFEQSRKYGPLSGTSFEERVIAAYNLGLLQPKYGPESTDG-----IVEI------------CSVCAVEGHKRDECPK 146          
BLAST of mRNA_S-ischiensis_contig78.19072.1 vs. uniprot
Match: A0A1Z5JE23_FISSO (CCHC-type domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JE23_FISSO)

HSP 1 Score: 73.6 bits (179), Expect = 6.210e-13
Identity = 39/116 (33.62%), Postives = 57/116 (49.14%), Query Frame = 0
Query:   73 QYVQEAIHKEVQYARKGQRSLPPLKRKVVAFVEREHLIPEDFDMDHKFGPLSGTSHEERVLSAYMAGLLQPRPDRGNGSAAAAAVEVDGKWPVPQDRRM-CFECGERGHFPRYCPS 187
            Q+V + IHK V+Y R+G  +LP    +V  ++   + IP DF+    FGPLSGTS+E+RV++ Y  G L  + D                   P D  + C  C + GH    CP+
Sbjct:   83 QFVPKYIHKNVEYCREGSSTLPSKTIQVYQWIRERYKIPSDFEQQRFFGPLSGTSYEQRVITEYKLGKLDRKED------------------APDDETLICSGCAQTGHLRDDCPA 180          
BLAST of mRNA_S-ischiensis_contig78.19072.1 vs. uniprot
Match: A0A448Z666_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z666_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 6.120e-10
Identity = 38/113 (33.63%), Postives = 52/113 (46.02%), Query Frame = 0
Query:   74 YVQEAIHKEVQYARKGQRSLPPLKRKVVAFVEREHLIPEDFDMDHKFGPLSGTSHEERVLSAYMAGLLQPRPDRGNGSAAAAAVEVDGKWPVPQDRRMCFECGERGHFPRYCP 186
            +V   IHK + Y R+G   L P      A VE    IP  F+ D K+GPLSGT  E+R+L AY  G+++P+   G  +     +E+            C  C   GH    CP
Sbjct:   96 HVPRYIHKNLGYKRRGDAVLDPSVEAAFALVEEHCGIPPGFENDRKYGPLSGTCFEQRLLDAYDKGMVRPKIGPGGNTTG---IEI------------CTHCASLGHGRDECP 193          
BLAST of mRNA_S-ischiensis_contig78.19072.1 vs. uniprot
Match: A0A8K1FH55_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FH55_PYTOL)

HSP 1 Score: 62.8 bits (151), Expect = 5.100e-9
Identity = 36/115 (31.30%), Postives = 57/115 (49.57%), Query Frame = 0
Query:   74 YVQEAIHKEVQYARKGQ-RSLPPLKRKVVAFVEREHLIPEDFDMDHKFGPLSGTSHEERVLSAYMAGLLQPRPDRGNGSAAAAAVEVDGKWPVPQDRRMCFECGERGHFPRYCPS 187
            +V   I   V+Y R+G+   +P   +K+V ++   ++IP DF+ +HK+GP SG ++EER+L AY   LL  +       +  A  EV           +C  C   GH  + CP 
Sbjct:   67 HVPRFIFNTVKYVRRGEAHEVPMTTQKIVDYIREHYVIPIDFEQNHKYGPHSGMTYEERLLRAYKFRLLDLK------DSDLAEPEV-----------ICVSCAVLGHSDKECPD 164          
BLAST of mRNA_S-ischiensis_contig78.19072.1 vs. uniprot
Match: A0A7S2S7Q2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7Q2_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.730e-7
Identity = 29/70 (41.43%), Postives = 46/70 (65.71%), Query Frame = 0
Query:   74 YVQEAIHKEVQYARKGQ-RSLPPLKRKVVAFVEREHLIPEDFDMDHKFGPLSGTSHEERVLSAYMAGLLQ 142
            +V E++H+ V Y R G   SL P + ++ +++  +  +P   D D K+GPLSGT HE RV+SA++ GLL+
Sbjct:   71 HVPESLHRAVDYKRVGMDTSLKPEEAELYSYIAAQCDVPSAIDSDSKYGPLSGTCHELRVVSAFVHGLLE 140          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig78.19072.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JSR8_9PHAE7.850e-2646.96CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A835Z875_9STRA4.140e-2246.90CCHC-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7S1D6G7_CYCTE3.120e-1740.52Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A1Z5JE23_FISSO6.210e-1333.62CCHC-type domain-containing protein n=1 Tax=Fistul... [more]
A0A448Z666_9STRA6.120e-1033.63Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A8K1FH55_PYTOL5.100e-931.30Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2S7Q2_9STRA1.730e-741.43Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D4.10.60.10coord: 146..191
e-value: 2.4E-6
score: 29.4
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 172..187
score: 9.949
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 160..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig78contigS-ischiensis_contig78:197586..203382 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig78.19072.1mRNA_S-ischiensis_contig78.19072.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig78 196218..203593 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig78.19072.1 ID=prot_S-ischiensis_contig78.19072.1|Name=mRNA_S-ischiensis_contig78.19072.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=192bp
MSTIRDHAGLQVKKRRPAAPGGEASDGLKKFRHNGAASGAKTAAAAAAAA
SQPVIKASAAGRERAGRGEAKPQYVQEAIHKEVQYARKGQRSLPPLKRKV
VAFVEREHLIPEDFDMDHKFGPLSGTSHEERVLSAYMAGLLQPRPDRGNG
SAAAAAVEVDGKWPVPQDRRMCFECGERGHFPRYCPSKPLE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf