prot_S-ischiensis_contig77.19018.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig77.19018.1
Unique Nameprot_S-ischiensis_contig77.19018.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length364
Homology
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BLAST of mRNA_S-ischiensis_contig77.19018.1 vs. uniprot
Match: A0A836CJS2_9STRA (Phosphodiesterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJS2_9STRA)

HSP 1 Score: 129 bits (325), Expect = 2.990e-29
Identity = 107/333 (32.13%), Postives = 147/333 (44.14%), Query Frame = 0 
Query:   12 SHRLSLKDITPF---------------GPPGKQPMALDAA--SPRDGAYRRPVHAYAKGTPGNRDDRGERTPTNRRYTFS-----QNVQNQLKRFDSMNLERPPDESFKEGLRMQLDSAHVIVLVLVGSAAEVILFALFVNSGGTGHSNDVVNGDGDYDHDSWDTKRFLQAGIAAAFLLELGVRGYAFGLSYFSTWGNVLDGFVIVVAFCLTMLTWAGSLAFMGRIVKPVDLGLAKWWAKRAAQKKGGDKDFEAPAVQLYKLVTRT--------VRGSCNVFTVGEKRELRTLMYLLAHNQIYVDSDMQRGNEAYWKEYGSKQTRRHSSVSAD 314
            +HRLSLKDI P                GPP       D    S  D  +      + +G   +     +     RR +F         ++  +RF+++ +E+P +E+  E  R+ L+S  +  +VL+ + A V L  L             V G+G  + +  D  R  Q  IA+ FL EL VR  AFGLSYFS W                         F  +  K     L +  A+        ++ +EAPA Q                ++ SC+VFTV EK  LR LM+LLAH+QIYVD DMQR N AYWKEYGS+Q RRHSS + D
Sbjct:   75 THRLSLKDIAPMVAAAVKTRSNNHSGSGPPTHPGARADLHNWSSGDANFNNSSMGHERGASRSMGGGAQPPSGGRRGSFQGRNAMPRTRSAARRFETIPIEKPDNETLMEDSRVALESWWLNAVVLLAAGAAVALAVLL-----------YVRGEGGPNTNLGDPLRAAQVAIASCFLAELVVRLRAFGLSYFSEW-------------------------FKEKAYKAPAAALYRLLART-------EQAYEAPAEQXXXXXXXXXXXXXXXXIKSSCSVFTVTEKNALRDLMFLLAHHQIYVDMDMQRANAAYWKEYGSRQVRRHSSAAHD 364
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig77.19018.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CJS2_9STRA2.990e-2932.13Phosphodiesterase n=1 Tax=Tribonema minus TaxID=30... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027359Voltage-dependent channel domain superfamilyGENE3D1.20.120.350coord: 144..219
e-value: 3.6E-7
score: 31.8
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..107
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 108..129
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 213..364
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 177..187
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 157..176
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 188..212
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 130..156
NoneNo IPR availableTMHMMTMhelixcoord: 191..213
NoneNo IPR availableTMHMMTMhelixcoord: 157..179
NoneNo IPR availableTMHMMTMhelixcoord: 107..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig77contigS-ischiensis_contig77:294917..303852 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig77.19018.1mRNA_S-ischiensis_contig77.19018.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig77 294917..304008 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig77.19018.1 ID=prot_S-ischiensis_contig77.19018.1|Name=mRNA_S-ischiensis_contig77.19018.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=364bp
MPPPGKETMSPSHRLSLKDITPFGPPGKQPMALDAASPRDGAYRRPVHAY
AKGTPGNRDDRGERTPTNRRYTFSQNVQNQLKRFDSMNLERPPDESFKEG
LRMQLDSAHVIVLVLVGSAAEVILFALFVNSGGTGHSNDVVNGDGDYDHD
SWDTKRFLQAGIAAAFLLELGVRGYAFGLSYFSTWGNVLDGFVIVVAFCL
TMLTWAGSLAFMGRIVKPVDLGLAKWWAKRAAQKKGGDKDFEAPAVQLYK
LVTRTVRGSCNVFTVGEKRELRTLMYLLAHNQIYVDSDMQRGNEAYWKEY
GSKQTRRHSSVSADVLAAGHEATSARGGPTTPFRDSHPDMRGMAAAGTAA
GYPFPSSHQAGGSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027359Volt_channel_dom_sf