prot_S-ischiensis_contig76.18984.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig76.18984.1
Unique Nameprot_S-ischiensis_contig76.18984.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length87
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig76.18984.1 vs. uniprot
Match: A0A7S2C3T1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C3T1_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 2.000e-8
Identity = 25/53 (47.17%), Postives = 38/53 (71.70%), Query Frame = 0 
Query:    7 LARCISAMMSELGPNCSERREIVSQQFERLQAAVLPSYVRFLLWLLSQPEEFF 59
            L + +  +    GP+C ERR +++ QFE+L A VLP ++RFLLW++ QPEEF+
Sbjct:    2 LRQGLDDLQRRFGPDCEERRAVMAYQFEQLWALVLPPHMRFLLWMMVQPEEFY 54
[Close]
BLAST of mRNA_S-ischiensis_contig76.18984.1 vs. uniprot
Match: A0A7S2E0P5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E0P5_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 1.420e-6
Identity = 25/54 (46.30%), Postives = 35/54 (64.81%), Query Frame = 0 
Query:   19 GPNCSERREIVSQQFERLQAAVLPSYVRFLLWLLSQPEEFFRSQPPPGPTKGGV 72
            G NC ER+ + + Q E+L + VLP ++RFLLWL+ QPEEF+       P+ GG 
Sbjct:  322 GANCEERQAVAAYQSEQLWSLVLPPHMRFLLWLMIQPEEFYHRDTRALPSSGGT 375
[Close]
BLAST of mRNA_S-ischiensis_contig76.18984.1 vs. uniprot
Match: A0A7S2WE74_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WE74_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 1.440e-6
Identity = 25/60 (41.67%), Postives = 38/60 (63.33%), Query Frame = 0 
Query:    4 EEELARCISAMMSELGPNCSERREIVSQQFERLQAAVLPSYVRFLLWLLSQPEEFFRSQP 63
            E  L R +  M    GP C+ER+ + S QFE+L + ++P+++RFLLWL+ QP+E     P
Sbjct:  415 EAYLRRGLDDMNIRFGPGCAERQAVSSYQFEQLWSLLMPTHMRFLLWLMIQPDEALSPTP 474
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig76.18984.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A7S2C3T1_9STRA2.000e-847.17Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2E0P5_9STRA1.420e-646.30Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2WE74_9STRA1.440e-641.67Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig76contigS-ischiensis_contig76:818642..819573 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig76.18984.1mRNA_S-ischiensis_contig76.18984.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig76 818642..819573 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig76.18984.1 ID=prot_S-ischiensis_contig76.18984.1|Name=mRNA_S-ischiensis_contig76.18984.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=87bp
PISEEELARCISAMMSELGPNCSERREIVSQQFERLQAAVLPSYVRFLLW
LLSQPEEFFRSQPPPGPTKGGVASPGPQQPHEGGGER
back to top