prot_S-ischiensis_contig76.18967.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig76.18967.1
Unique Nameprot_S-ischiensis_contig76.18967.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length102
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig76.18967.1 vs. uniprot
Match: A0A835Z1B5_9STRA (tRNA(Ile)-lysidine synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1B5_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 7.890e-5
Identity = 32/61 (52.46%), Postives = 36/61 (59.02%), Query Frame = 0 
Query:   38 CAEDSGGAPPAEASASGLGGGSGHHPLEGVVADALWEACGVRPGDTILVLVSGGSDSVALL 98
            C+  S G  P +AS S L         E    +AL E CGVRPGDTILVL SGG+DS ALL
Sbjct:   56 CSVSSSGPAPDDASGSAL---------EQQTWEALTERCGVRPGDTILVLCSGGADSTALL 107
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig76.18967.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z1B5_9STRA7.890e-552.46tRNA(Ile)-lysidine synthetase n=1 Tax=Tribonema mi... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 61..102
e-value: 1.8E-5
score: 26.0
NoneNo IPR availableSUPERFAMILY52402Adenine nucleotide alpha hydrolases-likecoord: 64..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig76contigS-ischiensis_contig76:727512..728602 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig76.18967.1mRNA_S-ischiensis_contig76.18967.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig76 727510..728602 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig76.18967.1 ID=prot_S-ischiensis_contig76.18967.1|Name=mRNA_S-ischiensis_contig76.18967.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=102bp
EAPFIGGSQTGAPRGTRPKHPLRPRKGAGGGRDPQSRCAEDSGGAPPAEA
SASGLGGGSGHHPLEGVVADALWEACGVRPGDTILVLVSGGSDSVALLLL
LH
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014729Rossmann-like_a/b/a_fold