prot_S-ischiensis_contig76.18960.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig76.18960.1
Unique Nameprot_S-ischiensis_contig76.18960.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length428
Homology
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BLAST of mRNA_S-ischiensis_contig76.18960.1 vs. uniprot
Match: A0A836C7K4_9STRA (Ankyrin repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7K4_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 1.230e-6
Identity = 27/45 (60.00%), Postives = 31/45 (68.89%), Query Frame = 0 
Query:   87 LHRASVAGDLASIVRVIGTGGDLEALSPCGRTALHYAAFYGHTEV 131
            LH  +V GDLA+ +  +  G DLE  S CGRTALHYAAFYGH  V
Sbjct:    3 LHGCAVVGDLANTLSQLEQGADLEGQSFCGRTALHYAAFYGHASV 47
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BLAST of mRNA_S-ischiensis_contig76.18960.1 vs. uniprot
Match: A0A6H5JU77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU77_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 2.730e-5
Identity = 29/40 (72.50%), Postives = 33/40 (82.50%), Query Frame = 0 
Query:   86 ELHRASVAGDLASIVRVIGTGGDLEALSPCGRTALHYAAF 125
            +LH+ASV GDLA+I R I  GG+LEA S CGRTALHYAAF
Sbjct:  380 QLHKASVVGDLAAISRFIKDGGNLEAQSFCGRTALHYAAF 419
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig76.18960.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A836C7K4_9STRA1.230e-660.00Ankyrin repeat-containing domain protein (Fragment... [more]
A0A6H5JU77_9PHAE2.730e-572.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 116..131
score: 47.83
coord: 164..178
score: 29.94
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 115..144
e-value: 5.4E-5
score: 32.6
coord: 148..177
e-value: 7.4
score: 15.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 115..147
score: 12.85
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 148..180
score: 10.232
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 87..179
e-value: 3.2E-11
score: 43.6
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 82..185
score: 27.133
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 50..198
e-value: 2.2E-25
score: 91.1
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 86..194
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 73..185
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 73..185
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 291..428
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..270
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 271..290

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig76contigS-ischiensis_contig76:661591..665235 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig76.18960.1mRNA_S-ischiensis_contig76.18960.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig76 661591..665235 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig76.18960.1 ID=prot_S-ischiensis_contig76.18960.1|Name=mRNA_S-ischiensis_contig76.18960.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=428bp
IRAAPTPGWSCSRSMADTLHAAAAAPSRLSSPSRETASSSASWTGPWVFR
TASSEGEPEAASPPQNSAVSFGRASDAEQRDTAAMELHRASVAGDLASIV
RVIGTGGDLEALSPCGRTALHYAAFYGHTEVVRALLLSGADSSSRGGGNS
TPLHFSAWGSNKGATRLLLDYSADVQVRDTAGKTPQAYTEDPEHMLCEAE
LSALAGRAGKSARLARHLAHRSTALSIAFFAVRASNDYGGAVLGTYGAMW
QRGIAYAFHVLGLPEAWQEHFTALVLPAAAVLLLFLLVLAQLSDLFSAKE
PSSGSGLACEPPAHKFSRAVRKLDLEILRLCMDNFGQALPLPRAATAAAA
AMFGGDGGYESLYDTTSDQLGALPLPRAATAAATAAAADIFGGGGASKYE
SLYDADTASDGMSPGRAPPGLAAAPAPR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf