prot_S-ischiensis_contig76.18922.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig76.18922.1
Unique Nameprot_S-ischiensis_contig76.18922.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length186
Homology
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BLAST of mRNA_S-ischiensis_contig76.18922.1 vs. uniprot
Match: A0A1Y1IPY0_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IPY0_KLENI)

HSP 1 Score: 59.3 bits (142), Expect = 4.620e-7
Identity = 52/173 (30.06%), Postives = 84/173 (48.55%), Query Frame = 0 
Query:    3 DKSVKSVPFDGKEGSFGVWRARFKAWMQLKGLYEVMIGAEPEAATREAAAEHKRKLQQVYNYLVMSLDPSSVRLVVVGGERDGARAWKTILDKFESTSATRVLGLYKRLVQIKREEDSWDPE------EIMLEIDTLCRQLGELEVEISEKLKCCILLVALSSRYDSLRVVLE 169
            DK V  +P  G E ++ VWRA+F+A ++ KGLY V+   +P    R+A+ + K          +M+L      + +  GE   A+AWK + + FE TS  RV+ L K+L  +    +    E      EI ++++T  + + E+E+ I         L  L   Y +L  VLE
Sbjct:    5 DKIV--IPQLGGE-NWSVWRAKFRALLEYKGLYVVIEQPDPVEG-RKASGQAKA---------LMNLHTQDAYVKLFIGESTAAKAWKKLEENFEKTSNARVVQLRKKLTSLTLTREKSIAEYVGEFREIQVDLETAGQTVSEVELAIHA-------LNGLPKEYATLVEVLE 157
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BLAST of mRNA_S-ischiensis_contig76.18922.1 vs. uniprot
Match: A0A1Y1IQ78_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IQ78_KLENI)

HSP 1 Score: 55.5 bits (132), Expect = 6.100e-6
Identity = 37/112 (33.04%), Postives = 62/112 (55.36%), Query Frame = 0 
Query:    3 DKSVKSVPFDGKEGSFGVWRARFKAWMQLKGLYEVMIGAEPEAATREAAAEHKRKLQQVYNYLVMSLDPSSVRLVVVGGERDGARAWKTILDKFESTSATRVLGLYKRLVQI 114
            DK V  +P  G E ++ VWRA+F+A ++ KGLY  +   +PE+       E ++ L Q    +++    + V+L +  G+   A+AWK + + FE TS  RV+ L K+L  +
Sbjct:    5 DKIV--IPQLGGE-NWSVWRAKFRALLEYKGLYIAI--EQPESV------EGRKALGQAKALMILHTQDADVKLFI--GKSAAAKAWKKLEENFEKTSNARVVQLRKKLTSL 103
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig76.18922.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A1Y1IPY0_KLENI4.620e-730.06Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A1Y1IQ78_KLENI6.100e-633.04Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 56..180
e-value: 7.3E-17
score: 61.3
NoneNo IPR availablePANTHERPTHR34676FAMILY NOT NAMEDcoord: 15..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig76contigS-ischiensis_contig76:78954..79511 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig76.18922.1mRNA_S-ischiensis_contig76.18922.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig76 78954..79511 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig76.18922.1 ID=prot_S-ischiensis_contig76.18922.1|Name=mRNA_S-ischiensis_contig76.18922.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=186bp
MADKSVKSVPFDGKEGSFGVWRARFKAWMQLKGLYEVMIGAEPEAATREA
AAEHKRKLQQVYNYLVMSLDPSSVRLVVVGGERDGARAWKTILDKFESTS
ATRVLGLYKRLVQIKREEDSWDPEEIMLEIDTLCRQLGELEVEISEKLKC
CILLVALSSRYDSLRVVLENKADLKYPEFVDSIRAH
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