prot_S-ischiensis_contig74.18765.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig74.18765.1
Unique Nameprot_S-ischiensis_contig74.18765.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length145
Homology
BLAST of mRNA_S-ischiensis_contig74.18765.1 vs. uniprot
Match: A0A6H5JP11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP11_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 1.770e-43
Identity = 79/134 (58.96%), Postives = 95/134 (70.90%), Query Frame = 0
Query:    9 GQLLRARHVDEGVYFSAWVVGKYDKSVREHIPWGGRVVSFAVPCPLEGCGHGRPGRNCRPDLSVTDGGLLRLDRARCSPRRFPLLLPHDQVYACHAAAVIHAKMAWAHHETGEVDVTRMDPILSAALACGFSLP 142
            G L RAR +DEGVYF  WVVGK+D SVR HIP     V FAVPCPLEG  H       RPD++   GG++R+D + C+ RRF +LLP DQ+YACHAAA++H +M WAHHE G+VDV RM  IL AA  CGFS+P
Sbjct:    6 GGLKRARRLDEGVYFRLWVVGKFDTSVRLHIPLKASAVVFAVPCPLEG--H-------RPDVTSVTGGIVRMDLSCCTARRFHVLLPFDQLYACHAAAIVHHRMGWAHHEVGKVDVGRMATILKAAGDCGFSVP 130          
BLAST of mRNA_S-ischiensis_contig74.18765.1 vs. uniprot
Match: L1J6G4_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J6G4_GUITC)

HSP 1 Score: 141 bits (356), Expect = 3.130e-36
Identity = 71/142 (50.00%), Postives = 90/142 (63.38%), Query Frame = 0
Query:    9 GQLLRARHVDEGVYFSAWVVGKYDKSVREHIPWGGRVVSFAVPCPLEG-------CGHGRPGRNCRPDLSVTDGGLLRLDRARCSPRRFPLLLPHDQVYACHAAAVIHAKMAWAHHETGEVDVTRMDPILSAALACGFSLPN 143
            G +  AR + +GV+   WVVGKYD  VREHIP  G  V F+VPCPL G         + R  R  R D++V DGGLLR+   RCS R F +LLP  +VYACHAAA++HA M W  HE GEVD++++  +L AA A GF +P 
Sbjct:  603 GSIRYARSLQDGVFCRVWVVGKYDLGVREHIPRDGIAVVFSVPCPLTGNVLSVESAMNSRYIRE-RKDVTVIDGGLLRMQPERCSKRSFSILLPEHEVYACHAAAMVHANMGWDEHEVGEVDLSKLPVVLHAAKAMGFEIPR 743          
BLAST of mRNA_S-ischiensis_contig74.18765.1 vs. uniprot
Match: A0A835Z6S0_9STRA (GH26 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6S0_9STRA)

HSP 1 Score: 140 bits (353), Expect = 8.080e-36
Identity = 70/135 (51.85%), Postives = 79/135 (58.52%), Query Frame = 0
Query:   11 LLRARHVDEGVYFSAWVVGKYDKSVREHIPWGGRVVSFAVPCPLEGCGHGRPGRNCRPDLSVTDGGLLRLDRARCSPRRFPLLLPHDQVYACHAAAVIHAKMAWAHHETGEVDVTRMDPILSAALACGFSLPNPP 145
            L R  HV +GV+ + W VGK D +V  H+P G   V FAVP PL            R D+++ DGG L LD ARC  R   LLLPHD VYACHAAA +HA   W HHE G VDV RM P L AA  CGF LP  P
Sbjct:  240 LTRCAHVSDGVHCALWAVGKSDAAVAAHLPRGATAVVFAVPSPLPA--------GQRSDVTLVDGGTLLLDAARCGRRALGLLLPHDAVYACHAAAAVHAARHWTHHEVGPVDVHRMAPTLQAAFDCGFRLPAAP 366          
BLAST of mRNA_S-ischiensis_contig74.18765.1 vs. uniprot
Match: D8LAY8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAY8_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 1.290e-18
Identity = 40/63 (63.49%), Postives = 50/63 (79.37%), Query Frame = 0
Query:   80 LDRARCSPRRFPLLLPHDQVYACHAAAVIHAKMAWAHHETGEVDVTRMDPILSAALACGFSLP 142
            +D + C+PRRF +LLP DQ+YACHAAA++H +M WAHHE G+VDV RM  IL AA  CGFS+P
Sbjct:    1 MDLSCCTPRRFHVLLPFDQLYACHAAAIVHHRMGWAHHEVGKVDVGRMATILKAAGDCGFSVP 63          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig74.18765.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JP11_9PHAE1.770e-4358.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
L1J6G4_GUITC3.130e-3650.00Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A835Z6S0_9STRA8.080e-3651.85GH26 domain-containing protein n=1 Tax=Tribonema m... [more]
D8LAY8_ECTSI1.290e-1863.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021940Uncharacterised domain Wax2, C-terminalPFAMPF12076Wax2_Ccoord: 94..140
e-value: 2.2E-8
score: 34.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig74contigS-ischiensis_contig74:305078..306657 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig74.18765.1mRNA_S-ischiensis_contig74.18765.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig74 305077..306657 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig74.18765.1 ID=prot_S-ischiensis_contig74.18765.1|Name=mRNA_S-ischiensis_contig74.18765.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=145bp
TGRGGVGCGQLLRARHVDEGVYFSAWVVGKYDKSVREHIPWGGRVVSFAV
PCPLEGCGHGRPGRNCRPDLSVTDGGLLRLDRARCSPRRFPLLLPHDQVY
ACHAAAVIHAKMAWAHHETGEVDVTRMDPILSAALACGFSLPNPP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021940Uncharacterised_Wax2_C