prot_S-ischiensis_contig73.18719.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig73.18719.1
Unique Nameprot_S-ischiensis_contig73.18719.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length326
Homology
BLAST of mRNA_S-ischiensis_contig73.18719.1 vs. uniprot
Match: A0A6H5KW24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW24_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 2.610e-32
Identity = 88/181 (48.62%), Postives = 104/181 (57.46%), Query Frame = 0
Query:    1 AVPLVLEDEAELQQQGWARPPKLRLLLAASHDPEGPGSAAEWVELDERETVFKCVSKLLARAPPAAPGTGNGPRAGPPGRGXXXXXXXTSSPGLMGLYKGLRRSGLGYERPGDPVVYFRVTMASGPRGVGEDQPGDVAARPCSVEDIRLLSPNLADALLLARGLRRLCKRQRALLPVPLGQ 181
            AVPL LEDE  LQ+QGW  PP++RLLLA S DPE   S A+WVEL+E +T+FKCVS L ARAP  AP +     AG  G             GLMGL + L R      R  + V++FR  +A GP  V E        R  S  DIR LSP LAD+LLLAR +R LC R R+ L V L Q
Sbjct: 2716 AVPLQLEDEGLLQEQGWVYPPRVRLLLAVSIDPEAD-SRADWVELEEDDTIFKCVSVLQARAPAVAPPSSVAAAAGHAGSARGQSLME----GLMGLKRSLGRG-----RGSEHVLFFRAHVAGGPTSVAEGNKTHTGVRVPSEGDIRGLSPTLADSLLLARSVRNLCARHRSDLAVSLDQ 2886          
BLAST of mRNA_S-ischiensis_contig73.18719.1 vs. uniprot
Match: D8LBS8_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS8_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 1.360e-27
Identity = 85/192 (44.27%), Postives = 103/192 (53.65%), Query Frame = 0
Query:    1 AVPLVLEDEAELQQQGWARPPKLRLLLAASHDPEGPGSAAEWVELDERETVFKCVSKLLARAPPAAPGTGNGPRAGPPGRGXXXXXXXTSSPGLMGLYKGLR----RSGLGYERPG-------DPVVYFRVTMASGPRGVGEDQPGDVAARPCSVEDIRLLSPNLADALLLARGLRRLCKRQRALLPVPLGQ 181
            AVPL LEDE  LQ+QGW  PP++RLLLA S DPE   S A+WVEL+E +T+FKCVS L ARAP  AP +     A     G           GLMGL + +     RS +G+ +         +   +FR  +  GP  V E        R  S  DIR LSP LAD+LLLAR +R LC R R  L V L Q
Sbjct: 1220 AVPLQLEDEGLLQEQGWVYPPRVRLLLAVSIDPE-VDSRADWVELEEDDTIFKCVSVLQARAPAVAPPSSVAAAAAAGHAGSARGQSLME--GLMGLKRTIHPTIDRSVMGWTKRSLGRGGGVEHFFFFRAHVGGGPTSVAEGNEAHPGVRVPSEGDIRGLSPTLADSLLLARSVRNLCARHRPDLAVSLDQ 1408          
BLAST of mRNA_S-ischiensis_contig73.18719.1 vs. uniprot
Match: C1E3P6_MICCC (Uncharacterized protein n=3 Tax=Micromonas TaxID=38832 RepID=C1E3P6_MICCC)

HSP 1 Score: 68.9 bits (167), Expect = 4.390e-9
Identity = 33/70 (47.14%), Postives = 45/70 (64.29%), Query Frame = 0
Query:  257 SVWLNHGLSEAVRATLSDPLAVAAGALPEWVGAVLGAGFAFLLPLELRLRHFRCQAFGTDRSVAWLQQEV 326
            + W N  +++ ++A L D +AVA+GA+P W   +L  G  FL PLE RLRHF   AFGT RSV W+Q+  
Sbjct: 2239 TAWENSRVAQKLQAQLEDAVAVASGAVPAWTHTLL-RGAWFLFPLEARLRHFHSTAFGTSRSVTWVQEHA 2307          
BLAST of mRNA_S-ischiensis_contig73.18719.1 vs. uniprot
Match: A0A7S0XH42_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0XH42_9CHLO)

HSP 1 Score: 67.4 bits (163), Expect = 1.050e-8
Identity = 32/68 (47.06%), Postives = 42/68 (61.76%), Query Frame = 0
Query:  259 WLNHGLSEAVRATLSDPLAVAAGALPEWVGAVLGAGFAFLLPLELRLRHFRCQAFGTDRSVAWLQQEV 326
            W N  L+  ++  L D +AVA+GALP W   ++G    FL PL  RLRHF   AFGT RSV W+Q++ 
Sbjct:  305 WENACLTRKLQLQLEDAVAVASGALPAWTAVLVGRA-GFLFPLPTRLRHFHSTAFGTSRSVTWVQEQA 371          
BLAST of mRNA_S-ischiensis_contig73.18719.1 vs. uniprot
Match: A0A7R9TCV6_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TCV6_MICPS)

HSP 1 Score: 62.4 bits (150), Expect = 2.870e-8
Identity = 30/70 (42.86%), Postives = 43/70 (61.43%), Query Frame = 0
Query:  257 SVWLNHGLSEAVRATLSDPLAVAAGALPEWVGAVLGAGFAFLLPLELRLRHFRCQAFGTDRSVAWLQQEV 326
            S W + GL+  ++  L D +AVA+GA+P W   +L     FL PL+ RLRH    AFGT RSV ++Q++ 
Sbjct:   59 SAWHSDGLTRKLQDQLDDAVAVASGAMPAWTSVLLSRA-GFLFPLKTRLRHLYSTAFGTSRSVTFVQEQA 127          
BLAST of mRNA_S-ischiensis_contig73.18719.1 vs. uniprot
Match: A0A8J5XMZ3_DIALT (HECT domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XMZ3_DIALT)

HSP 1 Score: 63.2 bits (152), Expect = 3.250e-7
Identity = 33/68 (48.53%), Postives = 40/68 (58.82%), Query Frame = 0
Query:  259 WLNHGLSEAVRATLSDPLAVAAGALPEWVGAVLGAGFAFLLPLELRLRHFRCQAFGTDRSVAWLQQEV 326
            W++  L   +   L D LAVAAGALP W GA+  A   FL     RLRHFR  AFGT R++AW Q  +
Sbjct: 1601 WVSAPLDAKLSTQLDDLLAVAAGALPPWCGALTRAA-PFLFAERTRLRHFRATAFGTSRALAWAQDRL 1667          
BLAST of mRNA_S-ischiensis_contig73.18719.1 vs. uniprot
Match: A0A4U5LZ19_STECR (E3 ubiquitin-protein ligase n=1 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4U5LZ19_STECR)

HSP 1 Score: 62.0 bits (149), Expect = 6.890e-7
Identity = 28/63 (44.44%), Postives = 41/63 (65.08%), Query Frame = 0
Query:  264 LSEAVRATLSDPLAVAAGALPEWVGAVLGAGFAFLLPLELRLRHFRCQAFGTDRSVAWLQQEV 326
            L++ +   L +PL VA+   P W+  V+   + FLL  ++R  HFRC AFG DRSVAWLQ+++
Sbjct:  577 LTKRMHLYLGEPLLVASQLFPSWIN-VIAMQYPFLLSYDVRRYHFRCAAFGVDRSVAWLQEQI 638          
BLAST of mRNA_S-ischiensis_contig73.18719.1 vs. uniprot
Match: UPI00062551EE (E3 ubiquitin-protein ligase HECTD1 isoform X5 n=1 Tax=Athalia rosae TaxID=37344 RepID=UPI00062551EE)

HSP 1 Score: 60.5 bits (145), Expect = 2.460e-6
Identity = 33/77 (42.86%), Postives = 41/77 (53.25%), Query Frame = 0
Query:  255 LESVWLNHG------LSEAVRATLSDPLAVAAGALPEWVGAVLGAGFAFLLPLELRLRHFRCQAFGTDRSVAWLQQE 325
            LE  W+N        ++  V   + DPLA+AAGALP W    L     FLLP E R  +F C AFG  RS+ WLQ +
Sbjct: 1980 LEGCWVNPDDFTSKKITNKVVQQIQDPLALAAGALPNWCEE-LARSCPFLLPFETRRLYFSCTAFGASRSIVWLQTQ 2055          
BLAST of mRNA_S-ischiensis_contig73.18719.1 vs. uniprot
Match: UPI0006262C99 (E3 ubiquitin-protein ligase HECTD1 isoform X1 n=8 Tax=Athalia rosae TaxID=37344 RepID=UPI0006262C99)

HSP 1 Score: 60.5 bits (145), Expect = 2.470e-6
Identity = 33/77 (42.86%), Postives = 41/77 (53.25%), Query Frame = 0
Query:  255 LESVWLNHG------LSEAVRATLSDPLAVAAGALPEWVGAVLGAGFAFLLPLELRLRHFRCQAFGTDRSVAWLQQE 325
            LE  W+N        ++  V   + DPLA+AAGALP W    L     FLLP E R  +F C AFG  RS+ WLQ +
Sbjct: 2022 LEGCWVNPDDFTSKKITNKVVQQIQDPLALAAGALPNWCEE-LARSCPFLLPFETRRLYFSCTAFGASRSIVWLQTQ 2097          
BLAST of mRNA_S-ischiensis_contig73.18719.1 vs. uniprot
Match: UPI0018D06730 (E3 ubiquitin-protein ligase Ufd4 n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D06730)

HSP 1 Score: 58.9 bits (141), Expect = 7.660e-6
Identity = 30/73 (41.10%), Postives = 40/73 (54.79%), Query Frame = 0
Query:  254 ALESVWLNHGLSEAVRATLSDPLAVAAGALPEWVGAVLGAGFAFLLPLELRLRHFRCQAFGTDRSVAWLQQEV 326
            A+   +L+H L+  +   L +PL +AAGA P W    L     FL PLE R   F C AFGT R++ WLQ + 
Sbjct: 1787 AVSPAFLSHKLTGKLHQQLQEPLTLAAGAAPPWCQQ-LNDWCPFLFPLETRQMFFACTAFGTSRTIVWLQAQT 1858          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig73.18719.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KW24_9PHAE2.610e-3248.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBS8_ECTSI1.360e-2744.27HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
C1E3P6_MICCC4.390e-947.14Uncharacterized protein n=3 Tax=Micromonas TaxID=3... [more]
A0A7S0XH42_9CHLO1.050e-847.06Hypothetical protein (Fragment) n=1 Tax=Mantoniell... [more]
A0A7R9TCV6_MICPS2.870e-842.86Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A8J5XMZ3_DIALT3.250e-748.53HECT domain-containing protein n=2 Tax=Diacronema ... [more]
A0A4U5LZ19_STECR6.890e-744.44E3 ubiquitin-protein ligase n=1 Tax=Steinernema ca... [more]
UPI00062551EE2.460e-642.86E3 ubiquitin-protein ligase HECTD1 isoform X5 n=1 ... [more]
UPI0006262C992.470e-642.86E3 ubiquitin-protein ligase HECTD1 isoform X1 n=8 ... [more]
UPI0018D067307.660e-641.10E3 ubiquitin-protein ligase Ufd4 n=1 Tax=Plutella ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 276..299
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 300..326
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..275

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig73contigS-ischiensis_contig73:785900..787972 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig73.18719.1mRNA_S-ischiensis_contig73.18719.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig73 785900..787974 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig73.18719.1 ID=prot_S-ischiensis_contig73.18719.1|Name=mRNA_S-ischiensis_contig73.18719.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=326bp
AVPLVLEDEAELQQQGWARPPKLRLLLAASHDPEGPGSAAEWVELDERET
VFKCVSKLLARAPPAAPGTGNGPRAGPPGRGGGGGGGGTSSPGLMGLYKG
LRRSGLGYERPGDPVVYFRVTMASGPRGVGEDQPGDVAARPCSVEDIRLL
SPNLADALLLARGLRRLCKRQRALLPVPLGQGEEDDMAGGGGAGGCCSSS
FRKMPQLPPPGGESKAEARAAGEKGGGETTLDAANAVDADDGGGDSDDDD
DRDALESVWLNHGLSEAVRATLSDPLAVAAGALPEWVGAVLGAGFAFLLP
LELRLRHFRCQAFGTDRSVAWLQQEV
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