prot_S-ischiensis_contig73.18715.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig73.18715.1
Unique Nameprot_S-ischiensis_contig73.18715.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length112
Homology
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BLAST of mRNA_S-ischiensis_contig73.18715.1 vs. uniprot
Match: D8LBS8_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS8_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 5.910e-12
Identity = 33/55 (60.00%), Postives = 41/55 (74.55%), Query Frame = 0 
Query:   34 ALAVTVQMQPLYPLRVVREFVLRSVHVLHPAYVDYCRGLLGGMVCLKAAAPAGAN 88
            +LA+   +QPL  L  +REFVLRSVH+ HPAY++YCRGLLG MVC+K   P GA 
Sbjct:   27 SLAILASVQPLAKLSQLREFVLRSVHITHPAYLEYCRGLLGAMVCIKP--PQGAQ 79
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BLAST of mRNA_S-ischiensis_contig73.18715.1 vs. uniprot
Match: A0A6H5KW24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW24_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 5.990e-12
Identity = 33/55 (60.00%), Postives = 41/55 (74.55%), Query Frame = 0 
Query:   34 ALAVTVQMQPLYPLRVVREFVLRSVHVLHPAYVDYCRGLLGGMVCLKAAAPAGAN 88
            +LA+   +QPL  L  +REFVLRSVH+ HPAY++YCRGLLG MVC+K   P GA 
Sbjct: 1493 SLAILASVQPLAKLSQLREFVLRSVHITHPAYLEYCRGLLGAMVCIKP--PQGAQ 1545
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig73.18715.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBS8_ECTSI5.910e-1260.00HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KW24_9PHAE5.990e-1260.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig73contigS-ischiensis_contig73:779801..781043 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig73.18715.1mRNA_S-ischiensis_contig73.18715.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig73 779801..781044 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig73.18715.1 ID=prot_S-ischiensis_contig73.18715.1|Name=mRNA_S-ischiensis_contig73.18715.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=112bp
GDGGGGGGGGGSGAAGSVGSGGGSAAAAAAASEALAVTVQMQPLYPLRVV
REFVLRSVHVLHPAYVDYCRGLLGGMVCLKAAAPAGANGGGGGFDDPAGG
GDPLAAALGARG
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