prot_S-ischiensis_contig73.18707.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig73.18707.1
Unique Nameprot_S-ischiensis_contig73.18707.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length255
Homology
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BLAST of mRNA_S-ischiensis_contig73.18707.1 vs. uniprot
Match: D8LBS9_ECTSI (Ankyrin repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS9_ECTSI)

HSP 1 Score: 246 bits (627), Expect = 7.030e-71
Identity = 153/259 (59.07%), Postives = 191/259 (73.75%), Query Frame = 0 
Query:    3 EEAETWACEACTFHNRKGATACEICATPNPN------AXXXXXXXXXXXXXGYXXXXXXXXXXXXXXXXXXXXXXXXXXQRKTASESGIGDDGDGLTPALLQRLARDGHFSLHSYLTKLCHSLALDAAHVEAGMARPSIEKAYVPTLLQLMSDPESS-GPDSPLLACRALNYLVQMGAGADVGARRGVRAYMRCVGCASAAGTPAFQELGQEAVNGLDLLCRSSVDHLRELSEPDVGGLGGPAGGGASILAAFIKNVYE 254
            ++ ETWACEACTFHNR GA++CE+C TPNP+                     YXXXXXXXXXXXXXXXXXXXXXXXXXX    A E+G G   DG+TPALL RL+RDGHFSL +YLTKLCH+LAL AA  E G++RP+I++A++P LL+LMSDP S  GPD PL ACRALNY +Q+GA +DVG +RG+R Y  C+ C++ AGT  +QELGQEAV+G+DLLCR+S + LREL+E D+GG      GG  +LA+F++ VY 
Sbjct:    5 DQGETWACEACTFHNRVGASSCEMCGTPNPSMAAGGAGSTADGADDGSSSAAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAKEAGDGTAEDGVTPALLSRLSRDGHFSLQNYLTKLCHTLALAAAEAETGLSRPNIDRAFIPVLLELMSDPGSRRGPDVPLQACRALNYFLQIGAASDVGVQRGMRTYALCITCSATAGTAEYQELGQEAVSGVDLLCRTSAEFLRELAETDIGG------GGGRVLASFVRGVYR 257
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BLAST of mRNA_S-ischiensis_contig73.18707.1 vs. uniprot
Match: A0A836CMD4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMD4_9STRA)

HSP 1 Score: 138 bits (348), Expect = 1.620e-33
Identity = 126/262 (48.09%), Postives = 156/262 (59.54%), Query Frame = 0 
Query:    6 ETWACEACTFHNRKGATACEICATPNPNAXXXXXXXXXXXXX-----GYXXXXXXXXXXXXXXXXXXXXXXXXXXQRKTASESGIGDDGDGLTPALLQRLARDGHFSLHSYLTKLCHSLALDAAHVEAGMARPSIEKAYVPTLLQLMSDPE-----SSGPDSPLLACRALNYLVQMGAG--ADVGARRGVRAYMRCVGCASAAGTPAFQELGQEAVNGLDLLCRSSVDHLRELSEPDVGGLGGPAGGGASILAAFIKNVYER 255
            E W+CEACT+HN     ACE+C TP P AXXXXXXXXXXXXX     GYXXXXXXXXXXXXXXXXXXXXXX                           RLA DGHFSL +YLT+LC  LA+  AH E+GM RP+++  Y+  L+ ++   +     S   ++PLLACRALNY + +GA   A+VG R G+ A + C+  A    T + QEL QEAV G+DLL RSS D+LR L E          G G  I+ +FI + Y +
Sbjct:   10 EGWSCEACTYHNTVSMPACEMCGTPAPAAXXXXXXXXXXXXXPPATPGYXXXXXXXXXXXXXXXXXXXXXX---------------------------RLAADGHFSLATYLTELCQELAIGVAHAESGMGRPTVDAGYIRVLVGIVGARDAAAARSRSQEAPLLACRALNYFLTLGASYAAEVGDRGGLGALLHCLSLACTGDTTSLQELAQEAVKGVDLLVRSSADNLRRLLE---------GGQGLRIVCSFIASAYRK 235
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BLAST of mRNA_S-ischiensis_contig73.18707.1 vs. uniprot
Match: A0A6H5KW24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW24_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 9.850e-14
Identity = 37/72 (51.39%), Postives = 52/72 (72.22%), Query Frame = 0 
Query:  183 VRAYMRCVGCASAAGTPAFQELGQEAVNGLDLLCRSSVDHLRELSEPDVGGLGGPAGGGASILAAFIKNVYE 254
            +R Y  C+ C++ AGT  +QELGQEAV+G+DLLCR+S + LREL+E D+GG      GG  +LA+F++ VY 
Sbjct:    1 MRTYALCITCSATAGTAEYQELGQEAVSGVDLLCRTSAEFLRELAETDIGG------GGGRVLASFVRGVYR 66
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig73.18707.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LBS9_ECTSI7.030e-7159.07Ankyrin repeat-containing protein n=1 Tax=Ectocarp... [more]
A0A836CMD4_9STRA1.620e-3348.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KW24_9PHAE9.850e-1451.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 6..30
e-value: 3.9E-5
score: 33.1
coord: 48..72
e-value: 0.014
score: 24.6
IPR001876Zinc finger, RanBP2-typePFAMPF00641zf-RanBPcoord: 6..32
e-value: 8.4E-5
score: 21.8
coord: 48..73
e-value: 2.7E-4
score: 20.2
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 8..27
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 50..69
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 46..75
score: 8.242
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 4..33
score: 8.897
NoneNo IPR availableGENE3D4.10.1060.10coord: 2..40
e-value: 3.0E-8
score: 34.7
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 4..31
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 47..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig73contigS-ischiensis_contig73:769843..772554 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig73.18707.1mRNA_S-ischiensis_contig73.18707.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig73 769513..772554 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig73.18707.1 ID=prot_S-ischiensis_contig73.18707.1|Name=mRNA_S-ischiensis_contig73.18707.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=255bp
MAEEAETWACEACTFHNRKGATACEICATPNPNALAGAGGGGAGGGGGYW
SCQACTMKNPVGSFTCHMCSTVDEEQRKTASESGIGDDGDGLTPALLQRL
ARDGHFSLHSYLTKLCHSLALDAAHVEAGMARPSIEKAYVPTLLQLMSDP
ESSGPDSPLLACRALNYLVQMGAGADVGARRGVRAYMRCVGCASAAGTPA
FQELGQEAVNGLDLLCRSSVDHLRELSEPDVGGLGGPAGGGASILAAFIK
NVYER
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR036443Znf_RanBP2_sf