prot_S-ischiensis_contig73.18689.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig73.18689.1
Unique Nameprot_S-ischiensis_contig73.18689.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length351
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig73.18689.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 276..350
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 197..217
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 218..228
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 167..185
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 249..253
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..70
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 156..166
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 254..275
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 71..89
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 130..155
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..118
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 119..129
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..39
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 229..248
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 186..196
NoneNo IPR availableTMHMMTMhelixcoord: 45..67
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 133..155
NoneNo IPR availableTMHMMTMhelixcoord: 253..275
NoneNo IPR availableTMHMMTMhelixcoord: 197..216
NoneNo IPR availableTMHMMTMhelixcoord: 229..248
NoneNo IPR availableTMHMMTMhelixcoord: 96..118
NoneNo IPR availableTMHMMTMhelixcoord: 160..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig73contigS-ischiensis_contig73:630329..635350 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig73.18689.1mRNA_S-ischiensis_contig73.18689.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig73 630299..636015 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig73.18689.1 ID=prot_S-ischiensis_contig73.18689.1|Name=mRNA_S-ischiensis_contig73.18689.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=351bp
MAVLMWRHFKSGFGGEFKGGFIVLMLLVAFEMSTFRVAGNTLTHLVAALT
LALLLPVMVIYQPLFILAIFKEWGLMSLEMADGHYGVVPVLLRVVVEFFS
LCVVGGIGTTFMVFFVVLQDFSDGASFAEALELFAVVLAAMLAVSWTFVS
LFAIFSIGTPLSKLPTVLTLTISVVSLWIFFSGTVVRLDQLPPPFSWFTY
SSPFFWALSLVFNGMLRGGDFTSQCEYDSPVYCLTFYGTVTLDIVGHADF
TATTAAAVVGSYVVVLLAGMVAVVLHHSRRRSIFGGLEGNNARAGHESRH
RAGPEPGRVGDGSPGLVRPVEVVKARGPARKEQSTRKPGTDPTRENGPGP
*
back to top