prot_S-ischiensis_contig73.18663.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig73.18663.1
Unique Nameprot_S-ischiensis_contig73.18663.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length275
Homology
BLAST of mRNA_S-ischiensis_contig73.18663.1 vs. uniprot
Match: D8LKV0_ECTSI (High mobility group protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKV0_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 5.300e-72
Identity = 114/165 (69.09%), Postives = 131/165 (79.39%), Query Frame = 0
Query:   35 FKKAPGAPRRPRSAYVLFSMENRDSVKETLPEGSKVTDIMKAVAEMWRGIDDNQRDVWNQKAAVDKARYEAELEAYDGPLKVPNKRARKNPLAPKRAMSAFLHFSQVMRPRLREQYPDAKNVDMSKMLGEEWNRMIPHEKAPYQAKAAEDTARYQAAMREWRAGG 199
            +KKAP APRR RSAYVLFSME R+ VK  LPEGSKVT++MK +A  WR + +  ++ W  KAA DK RYE EL  YDGPLKVPNKRA+K+PLAPKRAMSAFLHFSQ MRPRLRE YP+AKN+DMSKMLG+EWNRM   EK PYQ KA +DT RY+ AM  W+ GG
Sbjct:   47 YKKAPDAPRRGRSAYVLFSMEAREEVKNALPEGSKVTEVMKGIAAKWRELSETDKEEWTAKAAQDKDRYEQELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSDEEKLPYQTKAHDDTLRYREAMTVWKDGG 211          
BLAST of mRNA_S-ischiensis_contig73.18663.1 vs. uniprot
Match: F0W3U4_9STRA (High mobility group protein putative n=2 Tax=Albugo TaxID=65356 RepID=F0W3U4_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.200e-54
Identity = 88/164 (53.66%), Postives = 121/164 (73.78%), Query Frame = 0
Query:   32 KRDFKKAPGAPRRPRSAYVLFSMENRDSVKETLPEGSKVTDIMKAVAEMWRGIDDNQRDVWNQKAAVDKARYEAELEAYDGPLKVPNKRARKNPLAPKRAMSAFLHFSQVMRPRLREQYPDAKNVDMSKMLGEEWNRMIPHEKAPYQAKAAEDTARYQAAMREW 195
            KR  KKAPGAP+R +S Y+LFSM+ R+ +K  +P  +KVTD+M+A+A+ W  + ++++  W   A VDK RYE E+ +YDGPL+VPNKRA+K+P APKRA SAFL +SQVMRP+L+++ PD KN D+SK LGE W++    +KAPY  K  ED +RY+  M EW
Sbjct:   27 KRLQKKAPGAPKRGKSPYILFSMDKREEIKSHMPADAKVTDVMRAIADAWSKMSEDEKQPWKSAAEVDKQRYEEEMASYDGPLRVPNKRAKKDPSAPKRASSAFLFYSQVMRPQLKKENPDLKNTDISKRLGEAWSKATDVQKAPYVEKEREDRSRYKREMEEW 190          
BLAST of mRNA_S-ischiensis_contig73.18663.1 vs. uniprot
Match: M4BDC0_HYAAE (Uncharacterized protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=M4BDC0_HYAAE)

HSP 1 Score: 186 bits (471), Expect = 1.910e-54
Identity = 90/164 (54.88%), Postives = 118/164 (71.95%), Query Frame = 0
Query:   32 KRDFKKAPGAPRRPRSAYVLFSMENRDSVKETLPEGSKVTDIMKAVAEMWRGIDDNQRDVWNQKAAVDKARYEAELEAYDGPLKVPNKRARKNPLAPKRAMSAFLHFSQVMRPRLREQYPDAKNVDMSKMLGEEWNRMIPHEKAPYQAKAAEDTARYQAAMREW 195
            KR  KKAPGAP+R +S Y+LFSME R+ +K T+PE SKVTD+M+A+A+ W  + D+ +  W   A  DK RYE E+ AYDGPL+VPNKRA+K+P APKRA SAFL +SQVMRPR++ ++ D KN ++SK LGE W +    +KAP+  K   D ARY+  M EW
Sbjct:   56 KRLQKKAPGAPKRGKSPYILFSMEKREEIKATMPENSKVTDVMRAIADAWGKMGDDDKQPWKVAAEADKQRYEEEMAAYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWGKATDEQKAPFVEKEKVDRARYKREMEEW 219          
BLAST of mRNA_S-ischiensis_contig73.18663.1 vs. uniprot
Match: K3WVY6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVY6_GLOUD)

HSP 1 Score: 183 bits (465), Expect = 5.850e-54
Identity = 87/164 (53.05%), Postives = 119/164 (72.56%), Query Frame = 0
Query:   32 KRDFKKAPGAPRRPRSAYVLFSMENRDSVKETLPEGSKVTDIMKAVAEMWRGIDDNQRDVWNQKAAVDKARYEAELEAYDGPLKVPNKRARKNPLAPKRAMSAFLHFSQVMRPRLREQYPDAKNVDMSKMLGEEWNRMIPHEKAPYQAKAAEDTARYQAAMREW 195
            KR  KKAPGAP+R +S Y+LFSM+ R+ +K T+PE +KVTD+M+A+A+ W  + D+ +  W   A  DK RYE E+ +YDGPL+VPNKRA+K+P APKRA SAFL +SQVMRPR++ ++ D KN ++SK LGE W++    +KAP+  K   D ARY+  M EW
Sbjct:   24 KRLQKKAPGAPKRGKSPYILFSMDKREDIKATMPENAKVTDVMRAIADAWAKMSDDDKQPWKAAAEADKQRYEEEMASYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWSKATDEQKAPFVEKEKLDRARYKREMEEW 187          
BLAST of mRNA_S-ischiensis_contig73.18663.1 vs. uniprot
Match: A0A3R7KJP5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KJP5_9STRA)

HSP 1 Score: 184 bits (466), Expect = 7.560e-54
Identity = 89/164 (54.27%), Postives = 117/164 (71.34%), Query Frame = 0
Query:   32 KRDFKKAPGAPRRPRSAYVLFSMENRDSVKETLPEGSKVTDIMKAVAEMWRGIDDNQRDVWNQKAAVDKARYEAELEAYDGPLKVPNKRARKNPLAPKRAMSAFLHFSQVMRPRLREQYPDAKNVDMSKMLGEEWNRMIPHEKAPYQAKAAEDTARYQAAMREW 195
            KR  KKAPGAP+R +S Y+LFSME R+ +K T+PE SKVTD+M+A+A+ W  + D  +  W   A  DK RYE E+ +YDGPL+VPNKRA+K+P APKRA SAFL +SQVMRPR++ ++ D KN ++SK LGE W +    +KAP+  K   D ARY+  M EW
Sbjct:   27 KRLQKKAPGAPKRGKSPYILFSMEKREEIKATMPENSKVTDVMRAIADAWGKMSDEDKQPWKVAAEADKQRYEEEMASYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWAKATDEQKAPFVEKEKVDRARYKREMEEW 190          
BLAST of mRNA_S-ischiensis_contig73.18663.1 vs. uniprot
Match: A0A5D6YAG9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAG9_9STRA)

HSP 1 Score: 181 bits (460), Expect = 7.200e-53
Identity = 87/164 (53.05%), Postives = 117/164 (71.34%), Query Frame = 0
Query:   32 KRDFKKAPGAPRRPRSAYVLFSMENRDSVKETLPEGSKVTDIMKAVAEMWRGIDDNQRDVWNQKAAVDKARYEAELEAYDGPLKVPNKRARKNPLAPKRAMSAFLHFSQVMRPRLREQYPDAKNVDMSKMLGEEWNRMIPHEKAPYQAKAAEDTARYQAAMREW 195
            KR  KKAPGAP+R +S Y+LFSM+ R+ +K T+P+ SKVTD+M+A+A+ W  + D  +  W   A  DK RYE E+ +YDGPL+VPNKRA+K+P APKRA SAFL +SQVMRPR++ ++ D KN ++SK LGE W +    +KAP+  K   D ARY+  M EW
Sbjct:   49 KRLQKKAPGAPKRGKSPYILFSMDKREEIKATMPDNSKVTDVMRAIADAWAKMTDEDKQPWKAAAESDKQRYEEEMASYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWGKATDEQKAPFVEKEKLDRARYKREMEEW 212          
BLAST of mRNA_S-ischiensis_contig73.18663.1 vs. uniprot
Match: A0A067C9M6_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C9M6_SAPPC)

HSP 1 Score: 179 bits (455), Expect = 1.870e-52
Identity = 85/160 (53.12%), Postives = 115/160 (71.88%), Query Frame = 0
Query:   36 KKAPGAPRRPRSAYVLFSMENRDSVKETLPEGSKVTDIMKAVAEMWRGIDDNQRDVWNQKAAVDKARYEAELEAYDGPLKVPNKRARKNPLAPKRAMSAFLHFSQVMRPRLREQYPDAKNVDMSKMLGEEWNRMIPHEKAPYQAKAAEDTARYQAAMREW 195
            KKAPGAP+R +S Y+LFSM+ R+ +K T+P  SKVTD+M+A+A+ W  + + ++  W   A  DK RYE E+  YDGPL+VPNKRA+K+P APKRA SAFL +SQVMRPR++ ++ D KN ++SK LGE W +    +KAP+  K  ED ARY+  M EW
Sbjct:   27 KKAPGAPKRGKSPYILFSMDKREEIKATMPPNSKVTDVMRAIADAWSKMSEEEKAPWKLSAESDKQRYEEEMATYDGPLRVPNKRAKKHPNAPKRASSAFLFYSQVMRPRIKAEHADMKNTEISKQLGEAWAKATKAQKAPFVEKEKEDRARYKREMEEW 186          
BLAST of mRNA_S-ischiensis_contig73.18663.1 vs. uniprot
Match: A0A8K1CAL6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CAL6_PYTOL)

HSP 1 Score: 179 bits (453), Expect = 3.630e-52
Identity = 88/164 (53.66%), Postives = 116/164 (70.73%), Query Frame = 0
Query:   32 KRDFKKAPGAPRRPRSAYVLFSMENRDSVKETLPEGSKVTDIMKAVAEMWRGIDDNQRDVWNQKAAVDKARYEAELEAYDGPLKVPNKRARKNPLAPKRAMSAFLHFSQVMRPRLREQYPDAKNVDMSKMLGEEWNRMIPHEKAPYQAKAAEDTARYQAAMREW 195
            KR  KKAPGAP+R +S Y+LFSM+ R+++K TL   +KVTDIM+A+A  W  + D+ +  W   A  DK RYE E+ +YDGPL+VPNKRA+K+P APKRA SAFL +SQVMRPR++  +PD KN ++SK LGE W +    +KAP+  K  ED  RY+  M EW
Sbjct:   26 KRLQKKAPGAPKRGKSPYILFSMDKREAIKATLGADAKVTDIMRAIANAWAKMSDDDKQPWKLAAEQDKQRYEEEMASYDGPLRVPNKRAKKHPEAPKRASSAFLFYSQVMRPRIKADHPDMKNTEISKQLGEAWGKATEAQKAPFIEKEKEDRDRYKREMEEW 189          
BLAST of mRNA_S-ischiensis_contig73.18663.1 vs. uniprot
Match: A0A1V9ZRB9_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZRB9_9STRA)

HSP 1 Score: 184 bits (467), Expect = 8.790e-52
Identity = 87/160 (54.37%), Postives = 117/160 (73.12%), Query Frame = 0
Query:   36 KKAPGAPRRPRSAYVLFSMENRDSVKETLPEGSKVTDIMKAVAEMWRGIDDNQRDVWNQKAAVDKARYEAELEAYDGPLKVPNKRARKNPLAPKRAMSAFLHFSQVMRPRLREQYPDAKNVDMSKMLGEEWNRMIPHEKAPYQAKAAEDTARYQAAMREW 195
            KKAPGAP+R +S Y+LFSM+ R+ +K T+P  SKVTD+M+A+AE W  + ++++  W   A  DK RYE E+  YDGPL+VPNKRA+K+P APKRA SAFL +SQVMRPR++ ++PD KN ++SK LGE W +    +KAP+  K  ED ARY+  M EW
Sbjct:   26 KKAPGAPKRGKSPYILFSMDKREEIKATMPPNSKVTDVMRAIAEAWSKMSEDEKAPWKLSAESDKQRYEEEMATYDGPLRVPNKRAKKHPNAPKRASSAFLFYSQVMRPRIKAEHPDMKNTEISKQLGEAWAKATKAQKAPFVEKEKEDRARYKREMEEW 185          
BLAST of mRNA_S-ischiensis_contig73.18663.1 vs. uniprot
Match: A0A835ZA26_9STRA (High mobility group box domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA26_9STRA)

HSP 1 Score: 184 bits (467), Expect = 2.800e-51
Identity = 100/179 (55.87%), Postives = 121/179 (67.60%), Query Frame = 0
Query:   32 KRDFKKAPGAPRRPRSAYVLFSMENRDSVKETLPEGSKVTDIMKAVAEMWRGIDDNQRDVWNQKAAVDKARYEAELEAYDGPLKVPNKRA---------------------RKNPLAPKRAMSAFLHFSQVMRPRLREQYPDAKNVDMSKMLGEEWNRMIPHEKAPYQAKAAEDTARYQ 189
            KR FKKAPGAP R RSAYVLFS+  R  VK  LPEGSKVT+IM+ VA +WR + ++QR  W+ KAA DK RY+ EL  Y GPLK+PNKRA                     +K+P APKR MSAFL++SQVMRPRL+EQYPDAK  D+SK+LGE+W RM P +K  Y  KA  + A Y+
Sbjct:  105 KRLFKKAPGAPTRARSAYVLFSLSKRQEVKAGLPEGSKVTEIMRRVAALWREMTEDQRSEWHAKAAEDKQRYQDELTTYQGPLKIPNKRAHKAMFEQPQPAYEANGRAKRAKKDPRAPKRPMSAFLYYSQVMRPRLKEQYPDAKAQDVSKILGEQWARMGPDDKKVYNTKAEHEIAIYK 283          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig73.18663.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKV0_ECTSI5.300e-7269.09High mobility group protein n=2 Tax=Ectocarpus Tax... [more]
F0W3U4_9STRA1.200e-5453.66High mobility group protein putative n=2 Tax=Albug... [more]
M4BDC0_HYAAE1.910e-5454.88Uncharacterized protein n=22 Tax=Peronosporaceae T... [more]
K3WVY6_GLOUD5.850e-5453.05Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A3R7KJP5_9STRA7.560e-5454.27Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A5D6YAG9_9STRA7.200e-5353.05Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A067C9M6_SAPPC1.870e-5253.13Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
A0A8K1CAL6_PYTOL3.630e-5253.66Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1V9ZRB9_9STRA8.790e-5254.38Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A835ZA26_9STRA2.800e-5155.87High mobility group box domain-containing protein ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00886HIGHMOBLTY12coord: 180..200
score: 30.86
coord: 72..94
score: 13.69
coord: 143..161
score: 25.34
coord: 161..180
score: 41.67
NoneNo IPR availablePANTHERPTHR13711SWI/SNF-RELATED CHROMATIN BINDING PROTEINcoord: 24..111
coord: 118..233
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 127..197
e-value: 2.7E-23
score: 93.4
coord: 41..112
e-value: 7.1E-21
score: 85.3
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 42..110
e-value: 1.4E-15
score: 57.4
coord: 128..196
e-value: 6.9E-21
score: 74.4
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 42..111
score: 17.142
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 128..196
score: 18.265
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 116..199
e-value: 6.0E-23
score: 83.0
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 25..115
e-value: 1.7E-23
score: 84.7
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 27..110
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 113..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig73contigS-ischiensis_contig73:408991..412926 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig73.18663.1mRNA_S-ischiensis_contig73.18663.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig73 408778..415021 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig73.18663.1 ID=prot_S-ischiensis_contig73.18663.1|Name=mRNA_S-ischiensis_contig73.18663.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=275bp
MEEAVDHGVEDYGEVLPMPDPVPVPEKKKRKKRDFKKAPGAPRRPRSAYV
LFSMENRDSVKETLPEGSKVTDIMKAVAEMWRGIDDNQRDVWNQKAAVDK
ARYEAELEAYDGPLKVPNKRARKNPLAPKRAMSAFLHFSQVMRPRLREQY
PDAKNVDMSKMLGEEWNRMIPHEKAPYQAKAAEDTARYQAAMREWRAGGM
VGPAVAPSAEAAEGVPAGGGDQGYQPEEAMGEEDEHGDMERAYDAAEADE
VAVAVNAEGDAAAADGEGAVSGEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009071HMG_box_dom
IPR036910HMG_box_dom_sf