prot_S-ischiensis_contig72.18555.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig72.18555.1
Unique Nameprot_S-ischiensis_contig72.18555.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length133
Homology
BLAST of mRNA_S-ischiensis_contig72.18555.1 vs. uniprot
Match: A0A836CM26_9STRA (PUA-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM26_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 3.240e-12
Identity = 50/119 (42.02%), Postives = 66/119 (55.46%), Query Frame = 0
Query:    5 EQAVWKMLQEVVRLSNKVRPEGFPEVAMSDDIRRFNPDGTAAAFADGEAGSSVASEADADLEAERRMYFSFSVVEMLEIAPEVKQVMLQSRSTWERLGFQGEVLARAQQYLTAQAMFTD 123
            E  VW +LQEVVRLSNKV  +   +V +S+D+ R  P          E             E  RR  FSF+V EML+I P  KQ+MLQ+ +  ERL +Q E+L +AQ++L AQA   D
Sbjct:  194 EARVWGLLQEVVRLSNKVYDK--TKVTVSEDVARAAPAXXXXXXXXQE-------------ERARRSAFSFAVTEMLDIPPRAKQLMLQTLNIGERLDYQAELLDKAQKFLAAQATLKD 297          
BLAST of mRNA_S-ischiensis_contig72.18555.1 vs. uniprot
Match: A0A7S2V5P8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5P8_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 4.350e-6
Identity = 42/121 (34.71%), Postives = 66/121 (54.55%), Query Frame = 0
Query:    5 EQAVWKMLQEVVRLSNKVRPEGFPEVAMSDDIRRFNPDGTAAAFADGEAGSSVASEADADLEAERRMY--FSFSVVEMLEIAPEVKQVMLQSRSTWERLGFQGEVLARAQQYLTAQAMFTD 123
            E+ VW+ LQ+VVRLSNK++ +    + MS  +    P                 S+    LE +RR    FS +V++ML+I P +KQ+MLQ+ +T++RL FQ  +L   ++ L AQ+   D
Sbjct:  225 EEQVWECLQDVVRLSNKMQ-KTQKSIQMSKPLTYLAP---------------RYSDTGLTLELDRRRITDFSLAVLDMLDIPPLLKQMMLQTTNTYDRLEFQLSLLDPTRKLLAAQSALKD 329          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig72.18555.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A836CM26_9STRA3.240e-1242.02PUA-like domain-containing protein n=1 Tax=Tribone... [more]
A0A7S2V5P8_9STRA4.350e-634.71Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig72contigS-ischiensis_contig72:193987..200015 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig72.18555.1mRNA_S-ischiensis_contig72.18555.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig72 192199..200077 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig72.18555.1 ID=prot_S-ischiensis_contig72.18555.1|Name=mRNA_S-ischiensis_contig72.18555.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=133bp
MHEREQAVWKMLQEVVRLSNKVRPEGFPEVAMSDDIRRFNPDGTAAAFAD
GEAGSSVASEADADLEAERRMYFSFSVVEMLEIAPEVKQVMLQSRSTWER
LGFQGEVLARAQQYLTAQAMFTDTGASGRDDE*
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