prot_S-ischiensis_contig71.18477.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig71.18477.1
Unique Nameprot_S-ischiensis_contig71.18477.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length310
Homology
BLAST of mRNA_S-ischiensis_contig71.18477.1 vs. uniprot
Match: A0A6H5L244_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L244_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 5.620e-51
Identity = 104/242 (42.98%), Postives = 137/242 (56.61%), Query Frame = 0
Query:   66 QAPENRTKESTLGEMLGIAQQRFSQRTGVFGSTRTLANPTFSTIQLLRVPKAGSSAMSAIARHLVGCEPPGPCCSH------ACPSRYLQCAKVIGCTAHRVDRTALA---NPSIFKLSHMRSPVDRIVSGFLYGGEHAPSCADGEMQDYSACFKTMVANIPYQNIAARMFSGQYAYDPRVRVCWDQPS-------CQINLTTAMRGICKLHFVAITEAMGTSTLLLLENLPWVEPVVHLFP 291
            QA +   +EST    L +A++RF  R G   +    A   F  +QL+RVPKAGSS  S IAR L GC P GPCC        +CP   L C  V GCT+HR+D T  A   +PS+F ++++R  VDR+VSGF Y   H+P CA  +  DY ACF+ M+    +QNIAARM SG  AY   +R+C D+         C  +L + +RG C L+FV + E   +S LLL E LPW+ P    FP
Sbjct:   16 QAFDAGEQESTASTFLELARERFEARNGRPATFEENAFA-FDGLQLIRVPKAGSSEASVIARRLGGCVPRGPCCRFPGDPPGSCPLEGLMCPMVTGCTSHRMDPTTTAMLEDPSVFSMANIRGVVDRMVSGFFYTDPHSPPCAWKDDVDYEACFQKMITTRKFQNIAARMVSGHDAYKGGIRLCMDKDQDEGGEGVCVEDLESVIRGACNLNFVTMCETWDSSVLLLFETLPWLGPTADFFP 256          
BLAST of mRNA_S-ischiensis_contig71.18477.1 vs. uniprot
Match: D7FWY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWY0_ECTSI)

HSP 1 Score: 177 bits (450), Expect = 3.220e-49
Identity = 99/227 (43.61%), Postives = 135/227 (59.47%), Query Frame = 0
Query:   81 LGIAQQRFSQRTGVFGSTRTLANPTFSTIQLLRVPKAGSSAMSAIARHLVGCEPPGPCC---SH---ACPSRYLQCAKVIGCTAHRVD---RTALANPSIFKLSHMRSPVDRIVSGFLYGGEHAPSCADGEMQDYSACFKTMVANIPYQNIAARMFSGQYAYDPRVRVCWD-------QPSCQINLTTAMRGICKLHFVAITEAMGTSTLLLLENLPWVEPVVHLFP 291
            L +A++RF  R  V  +T       F  +QL+RVPKAGSS  S IAR L GC P GPCC    H   +CPS  L C  V+GCTAH +D    T L +PS+F +S++R  VDR+VSGFLY   H+P C   +  DY +CF+ M+    +QN+AARM SG  AY+  V++C +       + +C  +L + ++G C L+FV + EA  +S LLL E L W+EP    FP
Sbjct:   50 LELARERFEAR-NVRSATLEGDTFAFDRLQLVRVPKAGSSEASVIARRLGGCVPRGPCCMMPGHPPGSCPSEGLMCPAVLGCTAHMMDPKRNTMLEDPSVFSMSNVRDVVDRMVSGFLYTQPHSPLCTRTDDVDYESCFEEMMNTTKFQNVAARMVSGHDAYEGSVKLCMNKDQDVGGEAACAEDLESVIKGACNLNFVTMCEAWASSVLLLFETLRWLEPTADFFP 275          
BLAST of mRNA_S-ischiensis_contig71.18477.1 vs. uniprot
Match: D7G3X3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3X3_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 6.520e-18
Identity = 45/96 (46.88%), Postives = 59/96 (61.46%), Query Frame = 0
Query:  113 RVPKAGSSAMSAIARHLVGCEPPGPCCSH------ACPSRYLQCAKVIGCTAHRVDRTA---LANPSIFKLSHMRSPVDRIVSGFLYGGEHAPSCA 199
            RVPKAGSS  S IAR L GC P GPCC+       +CP   L C  V GC  H +++     L +PS+F ++++R  V+R+VSGFLY   H+P CA
Sbjct:    4 RVPKAGSSEASVIARRLGGCVPRGPCCAFPGDPPGSCPLEGLMCPMVTGCVGHNMNQRRTMMLEDPSVFSMTNIRGVVNRMVSGFLYTKSHSPPCA 99          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig71.18477.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L244_9PHAE5.620e-5142.98Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FWY0_ECTSI3.220e-4943.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3X3_ECTSI6.520e-1846.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 38..309
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 18..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..37
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..38
score: 0.687

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig71contigS-ischiensis_contig71:36919..70433 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig71.18477.1mRNA_S-ischiensis_contig71.18477.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig71 36290..70496 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig71.18477.1 ID=prot_S-ischiensis_contig71.18477.1|Name=mRNA_S-ischiensis_contig71.18477.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=310bp
MNHGRLWRGARGCFCTRVLSLAWLLLVLHRVPFPVACSSEPSKGPEEIRR
SGGQLEWGEATSFHLQAPENRTKESTLGEMLGIAQQRFSQRTGVFGSTRT
LANPTFSTIQLLRVPKAGSSAMSAIARHLVGCEPPGPCCSHACPSRYLQC
AKVIGCTAHRVDRTALANPSIFKLSHMRSPVDRIVSGFLYGGEHAPSCAD
GEMQDYSACFKTMVANIPYQNIAARMFSGQYAYDPRVRVCWDQPSCQINL
TTAMRGICKLHFVAITEAMGTSTLLLLENLPWVEPVVHLFPGLGVEKEET
GYGEVLPLF*
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