prot_S-ischiensis_contig7.18181.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig7.18181.1
Unique Nameprot_S-ischiensis_contig7.18181.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length574
Homology
BLAST of mRNA_S-ischiensis_contig7.18181.1 vs. uniprot
Match: D7FQA4_ECTSI (Cleavage and polyadenylation specificity factor subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA4_ECTSI)

HSP 1 Score: 633 bits (1633), Expect = 4.610e-215
Identity = 346/539 (64.19%), Postives = 402/539 (74.58%), Query Frame = 0
Query:    1 MFTPLYGCHEGGGGIVPVSSLLEVGGVTILLDCGWDIHFDESLLEPLRAAVKRVDLVLISHPDLEHLGALPYAYGKLGLKAPVFATLPVVKMGQMAVYDAYLTRTNEGEFSAFTLDDVDAAFGLFKTLKYSQHLRFSDRGAGVTITPYAAGRMIGAAVWRICWQSDDNDVVYATAYNHKPERHLRASALNTLHRPSVLITDAHNALT------EVPS--RKQREKVLLGLILETVRNGGNVLIPADTAGRVLELLVLLDDHWKKHRLGTYKLVLLHNTAYNTTEFAKSQLEWMSEDMGRAFDLQRNNPFELRHVHIMHSLEELDQLGTDPKIVLATDVSLDYGFSKALLLRWAPGAKNLVLMAGHGHGDTTARQLLGHIP-KWARNGSVCSVPARLQVKVRGWEVNLSRRILVGFARENSANLLQDLGELFREFSGPVRTLPARNIPPKIVPVRIPLSGEDLRAYREEESRKRRLEAXXXXXXXXXXXXXKEQASMLYAFGFVSMHT------RKRRAIVASLFSKYSKPQHLMFGYHD 524
            +FTPLYGC EG  G+ PVSS+LEVGGVTILLDCGWDIHFD +LLEPLR  VKR+DLVLISHPDLEHLG LPYA+GKLG++A V+ATLPV KMGQMAVYDAY++RT+EG F AF LDDVDAAF  FKTLK+SQHL FS RGAGVTITPYAAGRMIGAAVWR+ WQ++DND+VYATAYN+  ERHLRASAL TL RPSVLITDAHNALT      + PS  RK RE  L+  +++TVR GGNVL+P DTAGRVLELLVLL+D+W+KHRLG+YKLVLLHNTA+NT EFAKSQLEWMSED+GRAFDLQR+NPFELR+VHIMHSLEELD+LG DPK+V+ATD+SLD+GFSKALLLRWA G  N +L+ G GHG+TTAR L+     + +  G   +         RG  V  S  +  G                            A  + P  VPVR+PL+GE+L+A+R+EE+R      XXXXXXXXXXXXX                       ++RRAIVASLFSKYSKPQHLMFGY+D
Sbjct:  128 VFTPLYGCDEGATGVEPVSSILEVGGVTILLDCGWDIHFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGNFQAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNNDHERHLRASALGTLTRPSVLITDAHNALTGGGMIRKDPSSKRKLREVELISTVMDTVRGGGNVLLPTDTAGRVLELLVLLNDYWQKHRLGSYKLVLLHNTAFNTCEFAKSQLEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGDDPKVVMATDMSLDFGFSKALLLRWASGGANTILLTGRGHGNTTARTLIAKSEYRKSEAGRRAAAKDAAAAAGRGARVGYSGAVGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXASMVVPVTVPVRVPLAGEELKAFRDEENRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRRRAIVASLFSKYSKPQHLMFGYYD 666          
BLAST of mRNA_S-ischiensis_contig7.18181.1 vs. uniprot
Match: A0A836CFV8_9STRA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFV8_9STRA)

HSP 1 Score: 523 bits (1347), Expect = 6.590e-174
Identity = 302/541 (55.82%), Postives = 353/541 (65.25%), Query Frame = 0
Query:    2 FTPLYGCHEGGG-GIVPVSSLLEVGGVTILLDCGWDIHFDESLLEPLRAAVKRVDLVLISHPDLEHLGALPYAYGKLGLKAPVFATLPVVKMGQMAVYDAYLTRTNE--GEFSAFTLDDVDAAFGLFKTLKYSQHLRFSD--RGAGVTITPYAAGRMIGAAVWRICWQSDDNDVVYATAYNHKPERHLRASALNTLHRPSVLITDAHNALTEVPSR-KQREKVLLGLILETVRNGGNVLIPADTAGRVLELLVLLDDHWKKHRLGTYKLVLLHNTAYNTTEFAKSQLEWMSEDMGRAFDLQRNNPFELRHVHIMHSLEELDQLGTDPKIVLATDVSLDYGFSKALLLRWAPGAKNLVLMAGHGHGDTTARQLL----GHIPKWARNGSVCSVPARLQVKVRGWEVNLSRRILVGFARENSANLLQDLGELFREFSGPVRTLPARNIPPKIVPVRIPLSGEDLRAYREEESRKRRLEAXXXXXXXXXXXXXKEQA-------SMLYAFGFVSMHTRKRRAIV-ASLFSKYSKPQHLMFGYHD 524
            FTPLYGC +  G G  PV SLLEVG VTILLDCGWDI FDESLL PL + V RVDLVLISH DLEHLG LPYA GKLGLKAPVFATLP +KMGQM VYDA+  R+ E  G F AFTLDD DAAF  F+ LKYSQHLRFS+  RGAGVTITPYAAG +IG ++WRICWQ+DDND+VYA +YNH+ E HL   A+ TL RPS++ITDAH  LT  P   ++R   L  ++  TVR GGNVL+P DTAGRVLELL+LLD HW +++LG+Y LVLLH+ A+NT EFAKSQLEWMS+ + + FDLQR+NPFE+RHV + HSLEEL  LGT P +VLATD+SLD+GF+KALLL WA    NLVL+   GHGD+ AR+LL     H+   A  G V   P               +RI+V                                     VP R+PL GE+L AY EE         XXXXXXXX     + Q                   H  KRR +V ASLFSK+SKPQHLMFG+HD
Sbjct:   50 FTPLYGCFDDTGRGAGPVCSLLEVGDVTILLDCGWDIDFDESLLAPLASVVSRVDLVLISHADLEHLGGLPYAVGKLGLKAPVFATLPTLKMGQMTVYDAHQMRSLEANGTFKAFTLDDADAAFERFQPLKYSQHLRFSEGGRGAGVTITPYAAGHIIGGSLWRICWQTDDNDIVYAVSYNHRREEHLNGGAVETLSRPSIMITDAHQVLTMQPKPPRKRASDLTEMVTATVRKGGNVLLPCDTAGRVLELLLLLDHHWTRNKLGSYPLVLLHSMAFNTGEFAKSQLEWMSDAISKQFDLQRSNPFEMRHVAMAHSLEELQALGTGPMVVLATDLSLDFGFAKALLLAWAADPLNLVLLTQRGHGDSVARELLRGVTAHVRAAAAAGGVEEAP--------------KQRIVVE------------------------------------VPERVPLVGEELTAYLEEXXXXXXXXXXXXXXXXXAEEMERGQGLADSXXXXXXXXXXAAVAHVNKRRRLVNASLFSKFSKPQHLMFGFHD 540          
BLAST of mRNA_S-ischiensis_contig7.18181.1 vs. uniprot
Match: A0A6U9RRA8_9CHLO (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A6U9RRA8_9CHLO)

HSP 1 Score: 375 bits (962), Expect = 6.950e-118
Identity = 183/361 (50.69%), Postives = 250/361 (69.25%), Query Frame = 0
Query:    2 FTPLYGCHEGGGGIVPVSSLLEVGGVTILLDCGWDIHFDESLLEPLRAAVKRVDLVLISHPDLEHLGALPYAYGKLGLKAPVFATLPVVKMGQMAVYDAYLTRTNEGEFSAFTLDDVDAAFGLFKTLKYSQHLRFSDRGAGVTITPYAAGRMIGAAVWRICWQSDDNDVVYATAYNHKPERHLRASALNTLHRPSVLITDAHNALTEVPSRKQREKVLLGLILETVRNGGNVLIPADTAGRVLELLVLLDDHWKKHRLGTYKLVLLHNTAYNTTEFAKSQLEWMSEDMGRAFDLQRNNPFELRHVHIMHSLEELDQLGTDPKIVLATDVSLDYGFSKALLLRWAPGAKNLVLMAGHGHGDT 362
            F PL G H    G  P+  LLEV     LLDCGWD   +   L+ L A V++VD VL+SH D +HLGALPYA GKLGL  PV+ATLPV KMGQM +YD YL++  E E+  F L+DVD AFG+F  ++Y+Q +  + +G G+TITP+ AG  +G   WRI  +++D  ++YA  YNH+ ERHL  +AL+T +RP+VLITDA+N LTE  SRK R++ L+  +++T+R+GGNVLIP DTA RVLELL++LD HW+  ++G Y LVLL+N AYN  EFAKS LE+M+ D+ ++F+  R+N F+ ++VH+ HSLEEL++L   PK+VLA+  SL+ G  + LL+ WA    NL+L        T
Sbjct:   18 FVPLCGVH----GQEPMCYLLEVDAFVFLLDCGWDDRTEVMDLKELEAHVEKVDAVLVSHADTKHLGALPYAVGKLGLDCPVYATLPVHKMGQMVLYDLYLSKRAEEEYETFNLNDVDRAFGMFNPMRYAQQINLTGKGEGITITPFPAGHSVGGTTWRITKEAED--ILYAVDYNHRKERHLNGAALHTFNRPAVLITDAYNGLTEQTSRKLRDRTLVAGVMQTLRSGGNVLIPVDTATRVLELLLVLDSHWEHQKIGLYSLVLLNNVAYNVVEFAKSMLEFMNSDISKSFEHTRDNVFDCKNVHLCHSLEELEELPDQPKVVLASMASLEAGLGRNLLVDWASDPDNLILFVERAQAGT 372          
BLAST of mRNA_S-ischiensis_contig7.18181.1 vs. uniprot
Match: A0A7S0N1Z8_9CHLO (Cleavage and polyadenylation specificity factor subunit 2 (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N1Z8_9CHLO)

HSP 1 Score: 355 bits (911), Expect = 5.720e-114
Identity = 183/372 (49.19%), Postives = 245/372 (65.86%), Query Frame = 0
Query:    2 FTPLYGCHEGGGGIVPVSSLLEVGGVTILLDCGWDIHFDESLLEPLRAAVKRVDLVLISHPDLEHLGALPYAYGKLGLKAPVFATLPVVKMGQMAVYDAYLTRTNEGEFSAFTLDDVDAAFGLFKTLKYSQHLRFS-----DRGAGVTITPYAAGRMIGAAVWRICWQSDDNDVVYATAYNHKPERHLRASALNTLHRPSVLITDAHNALTEVPSRKQREKVLLGLILETVRNGGNVLIPADTAGRVLELLVLLDDHWKKHRLGTYKLVLLHNTAYNTTEFAKSQLEWMSEDMGRAFDLQRNNPFELRHVHIMHSLEELDQLGTDPKIVLATDVSLDYGFSKALLLRWAPGAKNLVLMAGHGHGDTTARQLL 368
            FTPL G H       P+S LLE+    ILLDCGW+   D + ++P+   V  +D VL+SH D  HLGALPY  GK GLKAPV+ATLPV KMGQM +YD YL+R    + +AF LDDVDAAF L   LKYSQH+  +        A VT+TPY AG ++G  +W+I  +++D  VVYA  +NHK ERHL  + L + +RPS+LITDA NA    P+R  R+K L   + + +R GG+VLIP DTAGRVLEL++ L+ +W   +L +YKLVLL N AYNT EFAKS +EWM++ +   FD  R N F+ RH+H+ HS+EEL  LG  PK+V+A+  SL+ G ++ L + WA   +NL+L    G  +T AR+++
Sbjct:    9 FTPLNGAHSE----TPLSYLLEIDDFKILLDCGWNDKLDLADIQPIVDRVPEIDAVLLSHSDTTHLGALPYLVGKKGLKAPVYATLPVHKMGQMYMYDHYLSRQAGEDQTAFDLDDVDAAFALITPLKYSQHVHLTASHGRSTSAAVTVTPYNAGHLLGGTLWKISKETED--VVYAVDFNHKKERHLNGTVLESFNRPSLLITDAFNAANRPPARAARDKELTDTVAKVLRGGGSVLIPIDTAGRVLELVLHLEQYWTVAKLASYKLVLLTNVAYNTMEFAKSHIEWMNDAISTTFDQTRTNAFKTRHLHLCHSVEELAGLGPGPKLVMASMQSLEVGPARELFVTWATNPRNLLLFPDMGQPNTLAREVM 374          
BLAST of mRNA_S-ischiensis_contig7.18181.1 vs. uniprot
Match: C1FDL7_MICCC (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FDL7_MICCC)

HSP 1 Score: 364 bits (934), Expect = 6.530e-113
Identity = 190/390 (48.72%), Postives = 256/390 (65.64%), Query Frame = 0
Query:    2 FTPLYGCHEGGGGIVPVSSLLEVGGVTILLDCGWDIHFDESLLEPLRAAVKRVDLVLISHPDLEHLGALPYAYGKLGLKAPVFATLPVVKMGQMAVYDAYLTRTNEGEFSAFTLDDVDAAFGLFKTLKYSQHLRFSDRGAGVTITPYAAGRMIGAAVWRICWQSDDNDVVYATAYNHKPERHLRASALNTLHRPSVLITDAHNALTEVPSRKQREKVLLGLILETVRNGGNVLIPADTAGRVLELLVLLDDHWKKHRLGTYKLVLLHNTAYNTTEFAKSQLEWMSEDMGRAFDLQRNNPFELRHVHIMHSLEELDQLGTDPKIVLATDVSLDYGFSKALLLRWAPGAKNLVLMAGHGHGDTTARQL--LGHIPKWARNGSVCSVPARLQV 389
            F+PLYG    G G  P   +L++ G  ILLDCGW+  FD +LLEPL      VD VLISHPD EHLGALPYA+GKLG++  V+ATLPV KMG M +YD +L+R    +F  FTLDD+D AF  F  ++Y+Q       GAG+TITPYAAG M+G A+W++  ++DD  VVYA  +NH+ E+HL  + L ++ RP+VLITDA NA   +P  K RE  L+  IL TVR  GNVLIP D AGRVLELL++L++ W + +L  Y+LVLL   AYNT EFA+S LEWM E +G+ FD +R+N F  RH+ + HS++E   L   PK+VLA+  SLD G S+ + + WAP  +NL++        + +R++  L  +P  AR     S+  RL++
Sbjct:   10 FSPLYGVQ--GIGEDPFCYVLDLDGFKILLDCGWNDSFDVNLLEPLAKVAAEVDAVLISHPDTEHLGALPYAFGKLGMRCKVYATLPVHKMGLMFMYDHFLSRNANEDFRVFTLDDIDTAFSAFVPVRYAQRSALVGHGAGITITPYAAGHMLGGALWKVHKETDD--VVYAVNFNHRREKHLNGTVLESIKRPAVLITDASNA-RRLPPSKTRENDLIEAILRTVRQDGNVLIPIDPAGRVLELLLVLEERWSQKQLAAYQLVLLTKVAYNTLEFARSHLEWMGEHVGQYFDRERHNAFNTRHLKLCHSIDEFRALPQGPKVVLASFGSLDAGASRHIFVEWAPDPRNLIVFTDRLQPGSLSREVCRLSQLPPGARLPLRISLSQRLKL 394          
BLAST of mRNA_S-ischiensis_contig7.18181.1 vs. uniprot
Match: UPI00155AE16F (probable cleavage and polyadenylation specificity factor subunit 2 isoform X2 n=1 Tax=Drosophila subobscura TaxID=7241 RepID=UPI00155AE16F)

HSP 1 Score: 345 bits (886), Expect = 2.640e-110
Identity = 170/354 (48.02%), Postives = 235/354 (66.38%), Query Frame = 0
Query:   17 PVSSLLEVGGVTILLDCGWDIHFDESLLEPLRAAVKRVDLVLISHPDLEHLGALPYAYGKLGLKAPVFATLPVVKMGQMAVYDAYLTRTNEGEFSAFTLDDVDAAFGLFKTLKYSQHLRFSDRGAGVTITPYAAGRMIGAAVWRICWQSDDNDVVYATAYNHKPERHLRASALNTLHRPSVLITDAHNALTEVPSRKQREKVLLGLILETVRNGGNVLIPADTAGRVLELLVLLDDHWKKHRLG--TYKLVLLHNTAYNTTEFAKSQLEWMSEDMGRAFDLQRNNPFELRHVHIMHSLEELDQLGTDPKIVLATDVSLDYGFSKALLLRWAPGAKNLVLMAGHGHGDTTARQLL 368
            P   +L++  V ILLDCGWD  FD + ++ L+  V  +D VL+SHPD  HLGALPY  GKLGL  P++AT+PV KMGQM +YD Y++  N G+F  F+LDDVD AF     LKY+Q +    +G G++ITP  AG MIG  +W+I  +  + D+VYAT +NHK ERHL    L+ L RPS+LITDA+NA  +   R+ R++ L+  IL+TVRN GNVLI ADTAGR+LEL  +LD  WK    G   Y L LL+N +YN  EFAKSQ+EWMS+ + +AF+  RNNPF+ +H+ + H+L ++ +L   PK+VLA+   L+ GF++ L ++WA  A N +++       T A  L+
Sbjct:   18 PPCYILQIDDVRILLDCGWDEKFDPNFIKELKRQVHTLDAVLLSHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDLYMSHFNMGDFDLFSLDDVDTAFEKITQLKYNQTVSLKGKGYGISITPLNAGHMIGGTIWKIV-KVGEEDIVYATDFNHKKERHLSGCELDRLQRPSLLITDAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAADTAGRMLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVVEFAKSQIEWMSDKLTKAFEGARNNPFQFKHIQLCHTLADVYKLPAGPKVVLASTPDLESGFTRDLFIQWASNANNSIILTTRTSPGTLAMDLV 370          
BLAST of mRNA_S-ischiensis_contig7.18181.1 vs. uniprot
Match: K3WHC0_GLOUD (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHC0_GLOUD)

HSP 1 Score: 351 bits (901), Expect = 1.000e-108
Identity = 176/354 (49.72%), Postives = 249/354 (70.34%), Query Frame = 0
Query:    2 FTPLYGCHEGGGGIVPVSS-LLEVGGVTILLDCGWDIHFDESLLEPLRAAVKRVDLVLISHPDLEHLGALPYAYGKLGLKAPVFATLPVVKMGQMAVYDAYLTRT-NEGEFSAFTLDDVDAAFGLFKTLKYSQHLRFSDRGAGVTITPYAAGRMIGAAVWRICWQSDDNDVVYATAYNHKPERHLRASALNTLHRPSVLITDAHNALTEVPSRKQREKVLLGLILETVRNGGNVLIPADTAGRVLELLVLLDDHWKKHRLGTYKLVLLHNTAYNTTEFAKSQLEWMSEDMGRAFDLQRNNPFELRHVHIMHSLEELDQLGTDPKIVLATDVSLDYGFSKALLLRWAPGAKNLVL 353
            FTPLYG H       P  + LLE+  V ILLDCGW   +D  LL+PL+  + R+DLVLISH DL H+GALPYA GKLGLKAP++ TLPV +MGQ+A+YDAY  +T ++G+F+ FTLDDVDA F  FK LKYS+ L  +  G G+ ITP+ AG +IG ++WRI  + + +D++YA  YNH+ E  L+ + L++  RP++LITD+ N  +E P  K R+  ++  IL+TVR GGNVLIP D++GRVLEL+ +LD +W +++L    + LLH+ +Y T + A++ LEW +E + + FD+ R NPF+  H+H++HSLEELD L + PK+VL T  SL+ GF+K L +RWA   +N ++
Sbjct:    6 FTPLYGVHSSD----PCCAYLLEIDDVCILLDCGWTDQYDTELLKPLQRVIDRIDLVLISHLDLAHMGALPYAIGKLGLKAPIYGTLPVHRMGQIALYDAYQAKTKSDGDFALFTLDDVDAVFENFKQLKYSEKLTLTSSGEGIVITPHVAGHLIGGSLWRI--EKETDDIIYAVDYNHRSEHVLQKTILDSFTRPTLLITDSMNIHSEQPKLKDRDSKIMVEILKTVRGGGNVLIPTDSSGRVLELMRVLDQYWIQNKLRD-PIALLHDMSYYTPKAAQAMLEWCNERIAKNFDVGRQNPFQFSHIHLIHSLEELDNLPS-PKVVLTTSSSLECGFAKDLFIRWASDQRNSII 351          
BLAST of mRNA_S-ischiensis_contig7.18181.1 vs. uniprot
Match: A0A6B2KYM6_9EUKA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KYM6_9EUKA)

HSP 1 Score: 350 bits (899), Expect = 2.350e-108
Identity = 184/367 (50.14%), Postives = 242/367 (65.94%), Query Frame = 0
Query:    2 FTPLYGCHEGGGGIVPVSSLLEVGGVTILLDCGWDIHFDESLLEPLRAAVKRVDLVLISHPDLEHLGALPYAYGKLGLKAPVFATLPVVKMGQMAVYDAYLTRTNEGEFSAFTLDDVDAAFGLFKTLKYSQHLRFSDRGAGVTITPYAAGRMIGAAVWRICWQSDDNDVVYATAYNHKPERHLRASALNTLHRPSVLITDAHNALTEVPSRKQREKVLLGLILETVRNGGNVLIPADTAGRVLELLVLLDDHWKKHRLGTYKLVLLHNTAYNTTEFAKSQLEWMSEDMGRAFDLQRNNPFELRHVHIMHSLEELDQLGTDPKIVLATDVSLDYGFSKALLLRWAPGAKNLVLMAGHGHGDTTARQLL 368
            F+PL G +       P+  LLE+    ILLDCGW+  +D  LL+PL+  V +++ VLISHPDL HLGALPYA GKLGLKA +  T+PV KMGQM +YDAY +R N  EF+ F LDDVDAAF  F  LKYSQ    S +G  + ITPYAAG +IG  +W+I  ++D+  ++YA  YNHK ERHL  + L TL +P++LITDA NAL    SR  R+ +L+  I  T+R GGNVL+P DTAGRVLELLV+LD HW  H   +Y L+ L+N AYNT EFAKSQLEWMSE +   F   R N F+  +V + H   E+++  + PK+VLA+  SL+ GF++ + + W   AKN ++        T AR+L+
Sbjct:    7 FSPLCGAYNED----PLCYLLEIDEYRILLDCGWNDDYDVQLLKPLKRVVGKINAVLISHPDLHHLGALPYAVGKLGLKAKIIGTIPVYKMGQMFMYDAYQSRQNSEEFTVFNLDDVDAAFDNFVQLKYSQRYTLSGKGIKLEITPYAAGHLIGGTIWKIKRETDE--IIYAVDYNHKKERHLSPTILETLTQPTLLITDALNALNSQDSRGNRDSLLIESITSTLRAGGNVLLPVDTAGRVLELLVILDQHWS-HFHYSYPLLFLNNVAYNTIEFAKSQLEWMSEAIMNKFISHRENCFQFSNVKLCHKTSEVNEFPS-PKVVLASMSSLNSGFAQDIFVEWCSDAKNRIIFTDTSRPGTIARRLM 365          
BLAST of mRNA_S-ischiensis_contig7.18181.1 vs. uniprot
Match: A0A2P6VIQ6_9CHLO (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VIQ6_9CHLO)

HSP 1 Score: 351 bits (900), Expect = 3.810e-108
Identity = 185/353 (52.41%), Postives = 236/353 (66.86%), Query Frame = 0
Query:    2 FTPLYGCHEGGGGIVPVSSLLEVGGVTILLDCGWDIHFDESLLEPLRAAVKRVDLVLISHPDLEHLGALPYAYGKLGLKAPVFATLPVVKMGQMAVYDAYLTRTNEGEFSAFTLDDVDAAFGLFKTLKYSQHLRFSDRGAGVTITPYAAGRMIGAAVWRICWQSDDNDVVYATAYNHKPERHLRASALNT-LHRPSVLITDAHNALTEVPSRKQREKVLLGLILETVRNGGNVLIPADTAGRVLELLVLLDDHWKKHRLGTYKLVLLHNTAYNTTEFAKSQLEWMSEDMGRAFDLQRNNPFELRHVHIMHSLEELDQLGTDPKIVLATDVSLDYGFSKALLLRWAPGAKNLVL 353
            FTPL G     GG  P+S LLE+ G   LLDCGW   +D + L P+ A + RVD VL+SH D +HLGALPY  G+ GL APV+AT PV KMGQMA+YD YL+R  + EF  F LDDVDAAF     L+Y Q+L  S +G G+T+TP+AAG ++G AVWRI W  +D   VYA  YNH+ ERHL  +AL +   RP++LI+DA NAL   P +  +EK LL  ++ T+R  G+VL+P DTAGR+LEL++LL+ HW +HRL TY LVLL   AY+T EFAKSQLEWM+E + R     R+NPF  R + +  S EEL  L   PK+VLAT  SL+ GFS+ L   WA   +N V+
Sbjct:   14 FTPLLGV----GGGQPLSYLLELAGFAFLLDCGWSDAYDVAQLAPVLAVLPRVDAVLLSHSDPQHLGALPYLVGRAGLAAPVYATSPVHKMGQMAMYDQYLSRQAQSEFDTFNLDDVDAAFARVTPLRYQQNLALSGKGVGITLTPFAAGHLLGGAVWRIRWGGED--FVYAVDYNHRKERHLNGTALESAFQRPALLISDALNALQSAPEKSTKEKDLLEAVMTTLRGDGSVLLPIDTAGRLLELVLLLEKHWSEHRL-TYPLVLLSAMAYSTLEFAKSQLEWMNEALTRQLGHARDNPFSTRFLKLCSSREELSHLPHGPKLVLATLPSLEAGFSRNLFADWAEDPRNAVV 359          
BLAST of mRNA_S-ischiensis_contig7.18181.1 vs. uniprot
Match: CPSF2_DROME (Probable cleavage and polyadenylation specificity factor subunit 2 n=40 Tax=Drosophilinae TaxID=43845 RepID=CPSF2_DROME)

HSP 1 Score: 349 bits (896), Expect = 7.540e-108
Identity = 177/382 (46.34%), Postives = 246/382 (64.40%), Query Frame = 0
Query:   17 PVSSLLEVGGVTILLDCGWDIHFDESLLEPLRAAVKRVDLVLISHPDLEHLGALPYAYGKLGLKAPVFATLPVVKMGQMAVYDAYLTRTNEGEFSAFTLDDVDAAFGLFKTLKYSQHLRFSDRGAGVTITPYAAGRMIGAAVWRICWQSDDNDVVYATAYNHKPERHLRASALNTLHRPSVLITDAHNALTEVPSRKQREKVLLGLILETVRNGGNVLIPADTAGRVLELLVLLDDHWKKHRLG--TYKLVLLHNTAYNTTEFAKSQLEWMSEDMGRAFDLQRNNPFELRHVHIMHSLEELDQLGTDPKIVLATDVSLDYGFSKALLLRWAPGAKNLVLMAGHGHGDTTARQLLGHIPKWARNGSVCSVPARLQVKVRGWEV 396
            P   +L++  V ILLDCGWD  FD + ++ L+  V  +D VL+SHPD  HLGALPY  GKLGL  P++AT+PV KMGQM +YD Y++  N G+F  F+LDDVD AF     LKY+Q +   D+G G++ITP  AG MIG  +W+I  +  + D+VYAT +NHK ERHL    L+ L RPS+LITDA+NA  +   R+ R++ L+  IL+TVRN GNVLI  DTAGRVLEL  +LD  WK    G   Y L LL+N +YN  EFAKSQ+EWMS+ + +AF+  RNNPF+ +H+ + HSL ++ +L   PK+VLA+   L+ GF++ L ++WA  A N +++       T A +L+ +       G    +  R +V + G E+
Sbjct:   18 PPCYILQIDDVRILLDCGWDEKFDANFIKELKRQVHTLDAVLLSHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDLYMSHFNMGDFDLFSLDDVDTAFEKITQLKYNQTVSLKDKGYGISITPLNAGHMIGGTIWKIV-KVGEEDIVYATDFNHKKERHLSGCELDRLQRPSLLITDAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAVDTAGRVLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVIEFAKSQIEWMSDKLTKAFEGARNNPFQFKHIQLCHSLADVYKLPAGPKVVLASTPDLESGFTRDLFVQWASNANNSIILTTRTSPGTLAMELVENCAP----GKQIELDVRRRVDLEGAEL 394          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig7.18181.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQA4_ECTSI4.610e-21564.19Cleavage and polyadenylation specificity factor su... [more]
A0A836CFV8_9STRA6.590e-17455.82Cleavage and polyadenylation specificity factor su... [more]
A0A6U9RRA8_9CHLO6.950e-11850.69Cleavage and polyadenylation specificity factor su... [more]
A0A7S0N1Z8_9CHLO5.720e-11449.19Cleavage and polyadenylation specificity factor su... [more]
C1FDL7_MICCC6.530e-11348.72Cleavage and polyadenylation specificity factor su... [more]
UPI00155AE16F2.640e-11048.02probable cleavage and polyadenylation specificity ... [more]
K3WHC0_GLOUD1.000e-10849.72Cleavage and polyadenylation specificity factor su... [more]
A0A6B2KYM6_9EUKA2.350e-10850.14Cleavage and polyadenylation specificity factor su... [more]
A0A2P6VIQ6_9CHLO3.810e-10852.41Cleavage and polyadenylation specificity factor su... [more]
CPSF2_DROME7.540e-10846.34Probable cleavage and polyadenylation specificity ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 456..488
IPR022712Beta-Casp domainSMARTSM01027Beta_Casp_2coord: 243..367
e-value: 4.1E-28
score: 109.4
IPR022712Beta-Casp domainPFAMPF10996Beta-Caspcoord: 243..367
e-value: 1.5E-19
score: 70.3
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeGENE3D3.60.15.10coord: 13..255
e-value: 4.8E-71
score: 240.8
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeSUPERFAMILY56281Metallo-hydrolase/oxidoreductasecoord: 2..374
IPR001279Metallo-beta-lactamasePFAMPF16661Lactamase_B_6coord: 21..193
e-value: 1.7E-54
score: 184.2
IPR027075Cleavage and polyadenylation specificity factor subunit 2PANTHERPTHR45922FAMILY NOT NAMEDcoord: 2..484

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig7contigS-ischiensis_contig7:2369826..2378591 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig7.18181.1mRNA_S-ischiensis_contig7.18181.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig7 2369748..2385047 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig7.18181.1 ID=prot_S-ischiensis_contig7.18181.1|Name=mRNA_S-ischiensis_contig7.18181.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=574bp
MFTPLYGCHEGGGGIVPVSSLLEVGGVTILLDCGWDIHFDESLLEPLRAA
VKRVDLVLISHPDLEHLGALPYAYGKLGLKAPVFATLPVVKMGQMAVYDA
YLTRTNEGEFSAFTLDDVDAAFGLFKTLKYSQHLRFSDRGAGVTITPYAA
GRMIGAAVWRICWQSDDNDVVYATAYNHKPERHLRASALNTLHRPSVLIT
DAHNALTEVPSRKQREKVLLGLILETVRNGGNVLIPADTAGRVLELLVLL
DDHWKKHRLGTYKLVLLHNTAYNTTEFAKSQLEWMSEDMGRAFDLQRNNP
FELRHVHIMHSLEELDQLGTDPKIVLATDVSLDYGFSKALLLRWAPGAKN
LVLMAGHGHGDTTARQLLGHIPKWARNGSVCSVPARLQVKVRGWEVNLSR
RILVGFARENSANLLQDLGELFREFSGPVRTLPARNIPPKIVPVRIPLSG
EDLRAYREEESRKRRLEAEEQEQRRQAEEMEKEQASMLYAFGFVSMHTRK
RRAIVASLFSKYSKPQHLMFGYHDGGGGGGGGGGGGGGGAGGGGGGGGGM
IMVCGRRSPSGGWLRPCRWRMWI*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022712Beta_Casp
IPR036866RibonucZ/Hydroxyglut_hydro
IPR001279Metallo-B-lactamas
IPR027075CPSF2