prot_S-ischiensis_contig7.18181.1 (polypeptide) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig7.18181.1 vs. uniprot
Match: D7FQA4_ECTSI (Cleavage and polyadenylation specificity factor subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA4_ECTSI) HSP 1 Score: 633 bits (1633), Expect = 4.610e-215 Identity = 346/539 (64.19%), Postives = 402/539 (74.58%), Query Frame = 0
Query: 1 MFTPLYGCHEGGGGIVPVSSLLEVGGVTILLDCGWDIHFDESLLEPLRAAVKRVDLVLISHPDLEHLGALPYAYGKLGLKAPVFATLPVVKMGQMAVYDAYLTRTNEGEFSAFTLDDVDAAFGLFKTLKYSQHLRFSDRGAGVTITPYAAGRMIGAAVWRICWQSDDNDVVYATAYNHKPERHLRASALNTLHRPSVLITDAHNALT------EVPS--RKQREKVLLGLILETVRNGGNVLIPADTAGRVLELLVLLDDHWKKHRLGTYKLVLLHNTAYNTTEFAKSQLEWMSEDMGRAFDLQRNNPFELRHVHIMHSLEELDQLGTDPKIVLATDVSLDYGFSKALLLRWAPGAKNLVLMAGHGHGDTTARQLLGHIP-KWARNGSVCSVPARLQVKVRGWEVNLSRRILVGFARENSANLLQDLGELFREFSGPVRTLPARNIPPKIVPVRIPLSGEDLRAYREEESRKRRLEAXXXXXXXXXXXXXKEQASMLYAFGFVSMHT------RKRRAIVASLFSKYSKPQHLMFGYHD 524
+FTPLYGC EG G+ PVSS+LEVGGVTILLDCGWDIHFD +LLEPLR VKR+DLVLISHPDLEHLG LPYA+GKLG++A V+ATLPV KMGQMAVYDAY++RT+EG F AF LDDVDAAF FKTLK+SQHL FS RGAGVTITPYAAGRMIGAAVWR+ WQ++DND+VYATAYN+ ERHLRASAL TL RPSVLITDAHNALT + PS RK RE L+ +++TVR GGNVL+P DTAGRVLELLVLL+D+W+KHRLG+YKLVLLHNTA+NT EFAKSQLEWMSED+GRAFDLQR+NPFELR+VHIMHSLEELD+LG DPK+V+ATD+SLD+GFSKALLLRWA G N +L+ G GHG+TTAR L+ + + G + RG V S + G A + P VPVR+PL+GE+L+A+R+EE+R XXXXXXXXXXXXX ++RRAIVASLFSKYSKPQHLMFGY+D
Sbjct: 128 VFTPLYGCDEGATGVEPVSSILEVGGVTILLDCGWDIHFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGNFQAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNNDHERHLRASALGTLTRPSVLITDAHNALTGGGMIRKDPSSKRKLREVELISTVMDTVRGGGNVLLPTDTAGRVLELLVLLNDYWQKHRLGSYKLVLLHNTAFNTCEFAKSQLEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGDDPKVVMATDMSLDFGFSKALLLRWASGGANTILLTGRGHGNTTARTLIAKSEYRKSEAGRRAAAKDAAAAAGRGARVGYSGAVGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXASMVVPVTVPVRVPLAGEELKAFRDEENRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRRRAIVASLFSKYSKPQHLMFGYYD 666
BLAST of mRNA_S-ischiensis_contig7.18181.1 vs. uniprot
Match: A0A836CFV8_9STRA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFV8_9STRA) HSP 1 Score: 523 bits (1347), Expect = 6.590e-174 Identity = 302/541 (55.82%), Postives = 353/541 (65.25%), Query Frame = 0
Query: 2 FTPLYGCHEGGG-GIVPVSSLLEVGGVTILLDCGWDIHFDESLLEPLRAAVKRVDLVLISHPDLEHLGALPYAYGKLGLKAPVFATLPVVKMGQMAVYDAYLTRTNE--GEFSAFTLDDVDAAFGLFKTLKYSQHLRFSD--RGAGVTITPYAAGRMIGAAVWRICWQSDDNDVVYATAYNHKPERHLRASALNTLHRPSVLITDAHNALTEVPSR-KQREKVLLGLILETVRNGGNVLIPADTAGRVLELLVLLDDHWKKHRLGTYKLVLLHNTAYNTTEFAKSQLEWMSEDMGRAFDLQRNNPFELRHVHIMHSLEELDQLGTDPKIVLATDVSLDYGFSKALLLRWAPGAKNLVLMAGHGHGDTTARQLL----GHIPKWARNGSVCSVPARLQVKVRGWEVNLSRRILVGFARENSANLLQDLGELFREFSGPVRTLPARNIPPKIVPVRIPLSGEDLRAYREEESRKRRLEAXXXXXXXXXXXXXKEQA-------SMLYAFGFVSMHTRKRRAIV-ASLFSKYSKPQHLMFGYHD 524
FTPLYGC + G G PV SLLEVG VTILLDCGWDI FDESLL PL + V RVDLVLISH DLEHLG LPYA GKLGLKAPVFATLP +KMGQM VYDA+ R+ E G F AFTLDD DAAF F+ LKYSQHLRFS+ RGAGVTITPYAAG +IG ++WRICWQ+DDND+VYA +YNH+ E HL A+ TL RPS++ITDAH LT P ++R L ++ TVR GGNVL+P DTAGRVLELL+LLD HW +++LG+Y LVLLH+ A+NT EFAKSQLEWMS+ + + FDLQR+NPFE+RHV + HSLEEL LGT P +VLATD+SLD+GF+KALLL WA NLVL+ GHGD+ AR+LL H+ A G V P +RI+V VP R+PL GE+L AY EE XXXXXXXX + Q H KRR +V ASLFSK+SKPQHLMFG+HD
Sbjct: 50 FTPLYGCFDDTGRGAGPVCSLLEVGDVTILLDCGWDIDFDESLLAPLASVVSRVDLVLISHADLEHLGGLPYAVGKLGLKAPVFATLPTLKMGQMTVYDAHQMRSLEANGTFKAFTLDDADAAFERFQPLKYSQHLRFSEGGRGAGVTITPYAAGHIIGGSLWRICWQTDDNDIVYAVSYNHRREEHLNGGAVETLSRPSIMITDAHQVLTMQPKPPRKRASDLTEMVTATVRKGGNVLLPCDTAGRVLELLLLLDHHWTRNKLGSYPLVLLHSMAFNTGEFAKSQLEWMSDAISKQFDLQRSNPFEMRHVAMAHSLEELQALGTGPMVVLATDLSLDFGFAKALLLAWAADPLNLVLLTQRGHGDSVARELLRGVTAHVRAAAAAGGVEEAP--------------KQRIVVE------------------------------------VPERVPLVGEELTAYLEEXXXXXXXXXXXXXXXXXAEEMERGQGLADSXXXXXXXXXXAAVAHVNKRRRLVNASLFSKFSKPQHLMFGFHD 540
BLAST of mRNA_S-ischiensis_contig7.18181.1 vs. uniprot
Match: A0A6U9RRA8_9CHLO (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A6U9RRA8_9CHLO) HSP 1 Score: 375 bits (962), Expect = 6.950e-118 Identity = 183/361 (50.69%), Postives = 250/361 (69.25%), Query Frame = 0
Query: 2 FTPLYGCHEGGGGIVPVSSLLEVGGVTILLDCGWDIHFDESLLEPLRAAVKRVDLVLISHPDLEHLGALPYAYGKLGLKAPVFATLPVVKMGQMAVYDAYLTRTNEGEFSAFTLDDVDAAFGLFKTLKYSQHLRFSDRGAGVTITPYAAGRMIGAAVWRICWQSDDNDVVYATAYNHKPERHLRASALNTLHRPSVLITDAHNALTEVPSRKQREKVLLGLILETVRNGGNVLIPADTAGRVLELLVLLDDHWKKHRLGTYKLVLLHNTAYNTTEFAKSQLEWMSEDMGRAFDLQRNNPFELRHVHIMHSLEELDQLGTDPKIVLATDVSLDYGFSKALLLRWAPGAKNLVLMAGHGHGDT 362
F PL G H G P+ LLEV LLDCGWD + L+ L A V++VD VL+SH D +HLGALPYA GKLGL PV+ATLPV KMGQM +YD YL++ E E+ F L+DVD AFG+F ++Y+Q + + +G G+TITP+ AG +G WRI +++D ++YA YNH+ ERHL +AL+T +RP+VLITDA+N LTE SRK R++ L+ +++T+R+GGNVLIP DTA RVLELL++LD HW+ ++G Y LVLL+N AYN EFAKS LE+M+ D+ ++F+ R+N F+ ++VH+ HSLEEL++L PK+VLA+ SL+ G + LL+ WA NL+L T
Sbjct: 18 FVPLCGVH----GQEPMCYLLEVDAFVFLLDCGWDDRTEVMDLKELEAHVEKVDAVLVSHADTKHLGALPYAVGKLGLDCPVYATLPVHKMGQMVLYDLYLSKRAEEEYETFNLNDVDRAFGMFNPMRYAQQINLTGKGEGITITPFPAGHSVGGTTWRITKEAED--ILYAVDYNHRKERHLNGAALHTFNRPAVLITDAYNGLTEQTSRKLRDRTLVAGVMQTLRSGGNVLIPVDTATRVLELLLVLDSHWEHQKIGLYSLVLLNNVAYNVVEFAKSMLEFMNSDISKSFEHTRDNVFDCKNVHLCHSLEELEELPDQPKVVLASMASLEAGLGRNLLVDWASDPDNLILFVERAQAGT 372
BLAST of mRNA_S-ischiensis_contig7.18181.1 vs. uniprot
Match: A0A7S0N1Z8_9CHLO (Cleavage and polyadenylation specificity factor subunit 2 (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N1Z8_9CHLO) HSP 1 Score: 355 bits (911), Expect = 5.720e-114 Identity = 183/372 (49.19%), Postives = 245/372 (65.86%), Query Frame = 0
Query: 2 FTPLYGCHEGGGGIVPVSSLLEVGGVTILLDCGWDIHFDESLLEPLRAAVKRVDLVLISHPDLEHLGALPYAYGKLGLKAPVFATLPVVKMGQMAVYDAYLTRTNEGEFSAFTLDDVDAAFGLFKTLKYSQHLRFS-----DRGAGVTITPYAAGRMIGAAVWRICWQSDDNDVVYATAYNHKPERHLRASALNTLHRPSVLITDAHNALTEVPSRKQREKVLLGLILETVRNGGNVLIPADTAGRVLELLVLLDDHWKKHRLGTYKLVLLHNTAYNTTEFAKSQLEWMSEDMGRAFDLQRNNPFELRHVHIMHSLEELDQLGTDPKIVLATDVSLDYGFSKALLLRWAPGAKNLVLMAGHGHGDTTARQLL 368
FTPL G H P+S LLE+ ILLDCGW+ D + ++P+ V +D VL+SH D HLGALPY GK GLKAPV+ATLPV KMGQM +YD YL+R + +AF LDDVDAAF L LKYSQH+ + A VT+TPY AG ++G +W+I +++D VVYA +NHK ERHL + L + +RPS+LITDA NA P+R R+K L + + +R GG+VLIP DTAGRVLEL++ L+ +W +L +YKLVLL N AYNT EFAKS +EWM++ + FD R N F+ RH+H+ HS+EEL LG PK+V+A+ SL+ G ++ L + WA +NL+L G +T AR+++
Sbjct: 9 FTPLNGAHSE----TPLSYLLEIDDFKILLDCGWNDKLDLADIQPIVDRVPEIDAVLLSHSDTTHLGALPYLVGKKGLKAPVYATLPVHKMGQMYMYDHYLSRQAGEDQTAFDLDDVDAAFALITPLKYSQHVHLTASHGRSTSAAVTVTPYNAGHLLGGTLWKISKETED--VVYAVDFNHKKERHLNGTVLESFNRPSLLITDAFNAANRPPARAARDKELTDTVAKVLRGGGSVLIPIDTAGRVLELVLHLEQYWTVAKLASYKLVLLTNVAYNTMEFAKSHIEWMNDAISTTFDQTRTNAFKTRHLHLCHSVEELAGLGPGPKLVMASMQSLEVGPARELFVTWATNPRNLLLFPDMGQPNTLAREVM 374
BLAST of mRNA_S-ischiensis_contig7.18181.1 vs. uniprot
Match: C1FDL7_MICCC (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FDL7_MICCC) HSP 1 Score: 364 bits (934), Expect = 6.530e-113 Identity = 190/390 (48.72%), Postives = 256/390 (65.64%), Query Frame = 0
Query: 2 FTPLYGCHEGGGGIVPVSSLLEVGGVTILLDCGWDIHFDESLLEPLRAAVKRVDLVLISHPDLEHLGALPYAYGKLGLKAPVFATLPVVKMGQMAVYDAYLTRTNEGEFSAFTLDDVDAAFGLFKTLKYSQHLRFSDRGAGVTITPYAAGRMIGAAVWRICWQSDDNDVVYATAYNHKPERHLRASALNTLHRPSVLITDAHNALTEVPSRKQREKVLLGLILETVRNGGNVLIPADTAGRVLELLVLLDDHWKKHRLGTYKLVLLHNTAYNTTEFAKSQLEWMSEDMGRAFDLQRNNPFELRHVHIMHSLEELDQLGTDPKIVLATDVSLDYGFSKALLLRWAPGAKNLVLMAGHGHGDTTARQL--LGHIPKWARNGSVCSVPARLQV 389
F+PLYG G G P +L++ G ILLDCGW+ FD +LLEPL VD VLISHPD EHLGALPYA+GKLG++ V+ATLPV KMG M +YD +L+R +F FTLDD+D AF F ++Y+Q GAG+TITPYAAG M+G A+W++ ++DD VVYA +NH+ E+HL + L ++ RP+VLITDA NA +P K RE L+ IL TVR GNVLIP D AGRVLELL++L++ W + +L Y+LVLL AYNT EFA+S LEWM E +G+ FD +R+N F RH+ + HS++E L PK+VLA+ SLD G S+ + + WAP +NL++ + +R++ L +P AR S+ RL++
Sbjct: 10 FSPLYGVQ--GIGEDPFCYVLDLDGFKILLDCGWNDSFDVNLLEPLAKVAAEVDAVLISHPDTEHLGALPYAFGKLGMRCKVYATLPVHKMGLMFMYDHFLSRNANEDFRVFTLDDIDTAFSAFVPVRYAQRSALVGHGAGITITPYAAGHMLGGALWKVHKETDD--VVYAVNFNHRREKHLNGTVLESIKRPAVLITDASNA-RRLPPSKTRENDLIEAILRTVRQDGNVLIPIDPAGRVLELLLVLEERWSQKQLAAYQLVLLTKVAYNTLEFARSHLEWMGEHVGQYFDRERHNAFNTRHLKLCHSIDEFRALPQGPKVVLASFGSLDAGASRHIFVEWAPDPRNLIVFTDRLQPGSLSREVCRLSQLPPGARLPLRISLSQRLKL 394
BLAST of mRNA_S-ischiensis_contig7.18181.1 vs. uniprot
Match: UPI00155AE16F (probable cleavage and polyadenylation specificity factor subunit 2 isoform X2 n=1 Tax=Drosophila subobscura TaxID=7241 RepID=UPI00155AE16F) HSP 1 Score: 345 bits (886), Expect = 2.640e-110 Identity = 170/354 (48.02%), Postives = 235/354 (66.38%), Query Frame = 0
Query: 17 PVSSLLEVGGVTILLDCGWDIHFDESLLEPLRAAVKRVDLVLISHPDLEHLGALPYAYGKLGLKAPVFATLPVVKMGQMAVYDAYLTRTNEGEFSAFTLDDVDAAFGLFKTLKYSQHLRFSDRGAGVTITPYAAGRMIGAAVWRICWQSDDNDVVYATAYNHKPERHLRASALNTLHRPSVLITDAHNALTEVPSRKQREKVLLGLILETVRNGGNVLIPADTAGRVLELLVLLDDHWKKHRLG--TYKLVLLHNTAYNTTEFAKSQLEWMSEDMGRAFDLQRNNPFELRHVHIMHSLEELDQLGTDPKIVLATDVSLDYGFSKALLLRWAPGAKNLVLMAGHGHGDTTARQLL 368
P +L++ V ILLDCGWD FD + ++ L+ V +D VL+SHPD HLGALPY GKLGL P++AT+PV KMGQM +YD Y++ N G+F F+LDDVD AF LKY+Q + +G G++ITP AG MIG +W+I + + D+VYAT +NHK ERHL L+ L RPS+LITDA+NA + R+ R++ L+ IL+TVRN GNVLI ADTAGR+LEL +LD WK G Y L LL+N +YN EFAKSQ+EWMS+ + +AF+ RNNPF+ +H+ + H+L ++ +L PK+VLA+ L+ GF++ L ++WA A N +++ T A L+
Sbjct: 18 PPCYILQIDDVRILLDCGWDEKFDPNFIKELKRQVHTLDAVLLSHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDLYMSHFNMGDFDLFSLDDVDTAFEKITQLKYNQTVSLKGKGYGISITPLNAGHMIGGTIWKIV-KVGEEDIVYATDFNHKKERHLSGCELDRLQRPSLLITDAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAADTAGRMLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVVEFAKSQIEWMSDKLTKAFEGARNNPFQFKHIQLCHTLADVYKLPAGPKVVLASTPDLESGFTRDLFIQWASNANNSIILTTRTSPGTLAMDLV 370
BLAST of mRNA_S-ischiensis_contig7.18181.1 vs. uniprot
Match: K3WHC0_GLOUD (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHC0_GLOUD) HSP 1 Score: 351 bits (901), Expect = 1.000e-108 Identity = 176/354 (49.72%), Postives = 249/354 (70.34%), Query Frame = 0
Query: 2 FTPLYGCHEGGGGIVPVSS-LLEVGGVTILLDCGWDIHFDESLLEPLRAAVKRVDLVLISHPDLEHLGALPYAYGKLGLKAPVFATLPVVKMGQMAVYDAYLTRT-NEGEFSAFTLDDVDAAFGLFKTLKYSQHLRFSDRGAGVTITPYAAGRMIGAAVWRICWQSDDNDVVYATAYNHKPERHLRASALNTLHRPSVLITDAHNALTEVPSRKQREKVLLGLILETVRNGGNVLIPADTAGRVLELLVLLDDHWKKHRLGTYKLVLLHNTAYNTTEFAKSQLEWMSEDMGRAFDLQRNNPFELRHVHIMHSLEELDQLGTDPKIVLATDVSLDYGFSKALLLRWAPGAKNLVL 353
FTPLYG H P + LLE+ V ILLDCGW +D LL+PL+ + R+DLVLISH DL H+GALPYA GKLGLKAP++ TLPV +MGQ+A+YDAY +T ++G+F+ FTLDDVDA F FK LKYS+ L + G G+ ITP+ AG +IG ++WRI + + +D++YA YNH+ E L+ + L++ RP++LITD+ N +E P K R+ ++ IL+TVR GGNVLIP D++GRVLEL+ +LD +W +++L + LLH+ +Y T + A++ LEW +E + + FD+ R NPF+ H+H++HSLEELD L + PK+VL T SL+ GF+K L +RWA +N ++
Sbjct: 6 FTPLYGVHSSD----PCCAYLLEIDDVCILLDCGWTDQYDTELLKPLQRVIDRIDLVLISHLDLAHMGALPYAIGKLGLKAPIYGTLPVHRMGQIALYDAYQAKTKSDGDFALFTLDDVDAVFENFKQLKYSEKLTLTSSGEGIVITPHVAGHLIGGSLWRI--EKETDDIIYAVDYNHRSEHVLQKTILDSFTRPTLLITDSMNIHSEQPKLKDRDSKIMVEILKTVRGGGNVLIPTDSSGRVLELMRVLDQYWIQNKLRD-PIALLHDMSYYTPKAAQAMLEWCNERIAKNFDVGRQNPFQFSHIHLIHSLEELDNLPS-PKVVLTTSSSLECGFAKDLFIRWASDQRNSII 351
BLAST of mRNA_S-ischiensis_contig7.18181.1 vs. uniprot
Match: A0A6B2KYM6_9EUKA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KYM6_9EUKA) HSP 1 Score: 350 bits (899), Expect = 2.350e-108 Identity = 184/367 (50.14%), Postives = 242/367 (65.94%), Query Frame = 0
Query: 2 FTPLYGCHEGGGGIVPVSSLLEVGGVTILLDCGWDIHFDESLLEPLRAAVKRVDLVLISHPDLEHLGALPYAYGKLGLKAPVFATLPVVKMGQMAVYDAYLTRTNEGEFSAFTLDDVDAAFGLFKTLKYSQHLRFSDRGAGVTITPYAAGRMIGAAVWRICWQSDDNDVVYATAYNHKPERHLRASALNTLHRPSVLITDAHNALTEVPSRKQREKVLLGLILETVRNGGNVLIPADTAGRVLELLVLLDDHWKKHRLGTYKLVLLHNTAYNTTEFAKSQLEWMSEDMGRAFDLQRNNPFELRHVHIMHSLEELDQLGTDPKIVLATDVSLDYGFSKALLLRWAPGAKNLVLMAGHGHGDTTARQLL 368
F+PL G + P+ LLE+ ILLDCGW+ +D LL+PL+ V +++ VLISHPDL HLGALPYA GKLGLKA + T+PV KMGQM +YDAY +R N EF+ F LDDVDAAF F LKYSQ S +G + ITPYAAG +IG +W+I ++D+ ++YA YNHK ERHL + L TL +P++LITDA NAL SR R+ +L+ I T+R GGNVL+P DTAGRVLELLV+LD HW H +Y L+ L+N AYNT EFAKSQLEWMSE + F R N F+ +V + H E+++ + PK+VLA+ SL+ GF++ + + W AKN ++ T AR+L+
Sbjct: 7 FSPLCGAYNED----PLCYLLEIDEYRILLDCGWNDDYDVQLLKPLKRVVGKINAVLISHPDLHHLGALPYAVGKLGLKAKIIGTIPVYKMGQMFMYDAYQSRQNSEEFTVFNLDDVDAAFDNFVQLKYSQRYTLSGKGIKLEITPYAAGHLIGGTIWKIKRETDE--IIYAVDYNHKKERHLSPTILETLTQPTLLITDALNALNSQDSRGNRDSLLIESITSTLRAGGNVLLPVDTAGRVLELLVILDQHWS-HFHYSYPLLFLNNVAYNTIEFAKSQLEWMSEAIMNKFISHRENCFQFSNVKLCHKTSEVNEFPS-PKVVLASMSSLNSGFAQDIFVEWCSDAKNRIIFTDTSRPGTIARRLM 365
BLAST of mRNA_S-ischiensis_contig7.18181.1 vs. uniprot
Match: A0A2P6VIQ6_9CHLO (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VIQ6_9CHLO) HSP 1 Score: 351 bits (900), Expect = 3.810e-108 Identity = 185/353 (52.41%), Postives = 236/353 (66.86%), Query Frame = 0
Query: 2 FTPLYGCHEGGGGIVPVSSLLEVGGVTILLDCGWDIHFDESLLEPLRAAVKRVDLVLISHPDLEHLGALPYAYGKLGLKAPVFATLPVVKMGQMAVYDAYLTRTNEGEFSAFTLDDVDAAFGLFKTLKYSQHLRFSDRGAGVTITPYAAGRMIGAAVWRICWQSDDNDVVYATAYNHKPERHLRASALNT-LHRPSVLITDAHNALTEVPSRKQREKVLLGLILETVRNGGNVLIPADTAGRVLELLVLLDDHWKKHRLGTYKLVLLHNTAYNTTEFAKSQLEWMSEDMGRAFDLQRNNPFELRHVHIMHSLEELDQLGTDPKIVLATDVSLDYGFSKALLLRWAPGAKNLVL 353
FTPL G GG P+S LLE+ G LLDCGW +D + L P+ A + RVD VL+SH D +HLGALPY G+ GL APV+AT PV KMGQMA+YD YL+R + EF F LDDVDAAF L+Y Q+L S +G G+T+TP+AAG ++G AVWRI W +D VYA YNH+ ERHL +AL + RP++LI+DA NAL P + +EK LL ++ T+R G+VL+P DTAGR+LEL++LL+ HW +HRL TY LVLL AY+T EFAKSQLEWM+E + R R+NPF R + + S EEL L PK+VLAT SL+ GFS+ L WA +N V+
Sbjct: 14 FTPLLGV----GGGQPLSYLLELAGFAFLLDCGWSDAYDVAQLAPVLAVLPRVDAVLLSHSDPQHLGALPYLVGRAGLAAPVYATSPVHKMGQMAMYDQYLSRQAQSEFDTFNLDDVDAAFARVTPLRYQQNLALSGKGVGITLTPFAAGHLLGGAVWRIRWGGED--FVYAVDYNHRKERHLNGTALESAFQRPALLISDALNALQSAPEKSTKEKDLLEAVMTTLRGDGSVLLPIDTAGRLLELVLLLEKHWSEHRL-TYPLVLLSAMAYSTLEFAKSQLEWMNEALTRQLGHARDNPFSTRFLKLCSSREELSHLPHGPKLVLATLPSLEAGFSRNLFADWAEDPRNAVV 359
BLAST of mRNA_S-ischiensis_contig7.18181.1 vs. uniprot
Match: CPSF2_DROME (Probable cleavage and polyadenylation specificity factor subunit 2 n=40 Tax=Drosophilinae TaxID=43845 RepID=CPSF2_DROME) HSP 1 Score: 349 bits (896), Expect = 7.540e-108 Identity = 177/382 (46.34%), Postives = 246/382 (64.40%), Query Frame = 0
Query: 17 PVSSLLEVGGVTILLDCGWDIHFDESLLEPLRAAVKRVDLVLISHPDLEHLGALPYAYGKLGLKAPVFATLPVVKMGQMAVYDAYLTRTNEGEFSAFTLDDVDAAFGLFKTLKYSQHLRFSDRGAGVTITPYAAGRMIGAAVWRICWQSDDNDVVYATAYNHKPERHLRASALNTLHRPSVLITDAHNALTEVPSRKQREKVLLGLILETVRNGGNVLIPADTAGRVLELLVLLDDHWKKHRLG--TYKLVLLHNTAYNTTEFAKSQLEWMSEDMGRAFDLQRNNPFELRHVHIMHSLEELDQLGTDPKIVLATDVSLDYGFSKALLLRWAPGAKNLVLMAGHGHGDTTARQLLGHIPKWARNGSVCSVPARLQVKVRGWEV 396
P +L++ V ILLDCGWD FD + ++ L+ V +D VL+SHPD HLGALPY GKLGL P++AT+PV KMGQM +YD Y++ N G+F F+LDDVD AF LKY+Q + D+G G++ITP AG MIG +W+I + + D+VYAT +NHK ERHL L+ L RPS+LITDA+NA + R+ R++ L+ IL+TVRN GNVLI DTAGRVLEL +LD WK G Y L LL+N +YN EFAKSQ+EWMS+ + +AF+ RNNPF+ +H+ + HSL ++ +L PK+VLA+ L+ GF++ L ++WA A N +++ T A +L+ + G + R +V + G E+
Sbjct: 18 PPCYILQIDDVRILLDCGWDEKFDANFIKELKRQVHTLDAVLLSHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDLYMSHFNMGDFDLFSLDDVDTAFEKITQLKYNQTVSLKDKGYGISITPLNAGHMIGGTIWKIV-KVGEEDIVYATDFNHKKERHLSGCELDRLQRPSLLITDAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAVDTAGRVLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVIEFAKSQIEWMSDKLTKAFEGARNNPFQFKHIQLCHSLADVYKLPAGPKVVLASTPDLESGFTRDLFVQWASNANNSIILTTRTSPGTLAMELVENCAP----GKQIELDVRRRVDLEGAEL 394 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig7.18181.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_S-ischiensis_contig7.18181.1 ID=prot_S-ischiensis_contig7.18181.1|Name=mRNA_S-ischiensis_contig7.18181.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=574bpback to top |