prot_S-ischiensis_contig7.18062.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig7.18062.1
Unique Nameprot_S-ischiensis_contig7.18062.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length206
Homology
BLAST of mRNA_S-ischiensis_contig7.18062.1 vs. uniprot
Match: D8LG48_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG48_ECTSI)

HSP 1 Score: 199 bits (506), Expect = 3.160e-61
Identity = 104/198 (52.53%), Postives = 136/198 (68.69%), Query Frame = 0
Query:    5 LDQQMEVDKKTALNLSFAGQGVLAFCFFVSACVVARNANAGFNVVITAFMYVAHVGYAFHLFNRRRKVGEGGMEASTPVRPMSGGMLIGLTTMLSFLSLMTAIYWGRFSGCETGSNDVAGYSCYSASGMAAVSWFASLLLILQAGTVWALVAWKDDLFESESGYDDFDGIAGGXXXXXXXXXAYAYDGA-----GMGG 197
            +D  M++DK+ +LN       VL  CFF+ ACVV+ NANAG NVV+TA MYVA+VG    +FNR+R   +GGM+ +  + P+ GG LIG+TTM+ FLSLMTA+YWG+ SGCE  ++DV GYSCY++ GMAAV+WFAS LLI +A T+ AL+ WK+D+F  + GYD+FD              AYAYDGA     GMGG
Sbjct:    7 IDAHMQLDKRKSLNTVVLAMAVLTICFFICACVVSSNANAGLNVVLTAMMYVAYVGLLAVVFNRKRAT-DGGMDTAMAIEPIVGGGLIGITTMMCFLSLMTAVYWGQMSGCEDDTDDVDGYSCYNSFGMAAVAWFASFLLISEAVTLAALILWKEDMFFVDGGYDNFDAQE---DRGAYSSSAYAYDGATFGTGGMGG 200          
BLAST of mRNA_S-ischiensis_contig7.18062.1 vs. uniprot
Match: A0A835YPK3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPK3_9STRA)

HSP 1 Score: 155 bits (392), Expect = 6.250e-44
Identity = 88/187 (47.06%), Postives = 115/187 (61.50%), Query Frame = 0
Query:    5 LDQQMEVDKKTALNLSFAGQGVLAFCFFVSACVVARNANAGFNVVITAFMYVAHVGYAFHLFNRRR-------KVGEGG----------MEASTPVRPMSGGMLIGLTTMLSFLSLMTAIYWGRFSGCETGSNDVAGYSCYSASGMAAVSWFASLLLILQAGTVWALVAWKDDLFESESGYDDFDGI 174
            +D   E +KK A+N+    Q   A CFFV ACVVARNANAGFN+V+TA +Y+AH  Y  ++  R          +G G           +E S+  R M+GG+ IG T+ L+ LSL TA+YWGR SGC  G + VAGYSCY+A GM A S FA+LLL+ +A    ALVAWKD LF ++ G D ++G 
Sbjct:    1 MDVLGEAEKKQAINVVLLAQAACAGCFFVCACVVARNANAGFNIVLTALLYIAHALYTAYVVGRESGLHALLANLGSGXXXXXXXAHGLVEPSSTSRLMAGGVAIGTTSALTLLSLTTAVYWGRMSGCTAGVSGVAGYSCYAAGGMRAASAFAALLLVCEALLAAALVAWKDALFAAD-GLDGYEGF 186          
BLAST of mRNA_S-ischiensis_contig7.18062.1 vs. uniprot
Match: W7TS32_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS32_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.830e-30
Identity = 60/172 (34.88%), Postives = 95/172 (55.23%), Query Frame = 0
Query:    5 LDQQMEVDKKTALNLSFAGQGVLAFCFFVSACVVARNANAGFNVVITAFMYVAHVGYAFHLFNRRRKVGEGGMEASTPVRPMSGGMLIGLTTMLSFLSLMTAIYWGRFSGCETGSNDVAGYSCYSASGMAAVSWFASLLLILQAGTVWALVAWKDDLFESESGYDDFDGIAG 176
            +DQ  ++D +  +      QGV   C+ + + VVA  AN GFN V+TA +Y+ +V   +H+  R +              P++ G ++G++ M++FLSLMTAI+WG+ + C  G  D+  YSC + S  +A   FA+LL ++Q     ALV W+D+  +  S YDD  G  G
Sbjct:    1 MDQLGDLDHEKLITAGLVTQGVFVLCYTICSFVVASTANMGFNAVLTALLYIFYVAGTYHVLQRSKM-------------PLAVGFVLGVSVMITFLSLMTAIFWGQLANCSPGYYDIKRYSCTNRSAYSATCAFATLLFLVQLVFTSALVLWRDEFIQDSSAYDDIHGAGG 159          
BLAST of mRNA_S-ischiensis_contig7.18062.1 vs. uniprot
Match: A0A7S1TNM9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TNM9_9STRA)

HSP 1 Score: 103 bits (258), Expect = 2.520e-24
Identity = 58/157 (36.94%), Postives = 83/157 (52.87%), Query Frame = 0
Query:   17 LNLSFAGQGVLAFCFFVSACVVARNANAGFNVVITAFMYVAHVGYAFHLFNRRRKVGEGGMEASTPVRPMSGGMLIGLTTMLSFLSLMTAIYWGRFSGCETGSNDVAGYSCYSASGMAAVSWFASLLLILQAGTVWALVAWKDDLFESESGYDDFDG 173
            LN++ A Q + +F   + + VVA  ANAGFN V+TA +    V  A+ + NR +               ++ G +IG++TM+SFL LMTA++WG+ SGCE   +D   YSC +     A    + LL +L       LV W+DD     SGYDD  G
Sbjct:   13 LNVNLALQALFSFALLICSFVVAATANAGFNAVLTAILSCTFVVGAYRVLNRSQST-------------LAVGFVIGVSTMMSFLMLMTAVFWGQLSGCEDVKDDPDQYSCDNKKAYGATCAMSVLLFLLDVSFTILLVLWRDDFMSESSGYDDIGG 156          
BLAST of mRNA_S-ischiensis_contig7.18062.1 vs. uniprot
Match: A0A7S2S6Q8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S6Q8_9STRA)

HSP 1 Score: 100 bits (250), Expect = 6.000e-23
Identity = 59/163 (36.20%), Postives = 84/163 (51.53%), Query Frame = 0
Query:   10 EVDKKTALNLSFAGQGVLAFCFFVSACVVARNANAGFNVVITAFMYVAHVGYAFHLFNRRRKVGEGGMEASTPVRPMSGGMLIGLTTMLSFLSLMTAIYWGRFSGCETGSNDVAGYSCYSASGMAAVSWFASLLLILQAGTVWALVAWKDDLFES--ESGYDD 170
            ++D+K  L L      +   CFF+ ACV A+ AN GFNVV T+F +  HV     + +R                 +  G L+GL+   ++LSL TAI+WG+ + C+  ++ ++ YSC + S   AV  FA+LL ILQ G    L  WKDD   S  E  Y D
Sbjct:   16 DLDRKLVLKLLLGAHALFTGCFFICACVAAKTANMGFNVVFTSFCFGFHVAVGILVIHRSLHT------------QLWVGFLLGLSGATAWLSLQTAIFWGQLADCDRHAHHLSQYSCSNVSAYKAVCAFAALLFILQGGLFAVLAVWKDDFSPSPAEHRYSD 166          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig7.18062.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LG48_ECTSI3.160e-6152.53Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YPK3_9STRA6.250e-4447.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TS32_9STRA1.830e-3034.88Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S1TNM9_9STRA2.520e-2436.94Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2S6Q8_9STRA6.000e-2336.20Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..40
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..110
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..66
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 111..129
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 130..155
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 67..86
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 156..205
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..45
NoneNo IPR availableTMHMMTMhelixcoord: 17..39
NoneNo IPR availableTMHMMTMhelixcoord: 134..156
NoneNo IPR availableTMHMMTMhelixcoord: 87..109
NoneNo IPR availableTMHMMTMhelixcoord: 44..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig7contigS-ischiensis_contig7:1339212..1343505 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig7.18062.1mRNA_S-ischiensis_contig7.18062.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig7 1337989..1343549 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig7.18062.1 ID=prot_S-ischiensis_contig7.18062.1|Name=mRNA_S-ischiensis_contig7.18062.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=206bp
MALGLDQQMEVDKKTALNLSFAGQGVLAFCFFVSACVVARNANAGFNVVI
TAFMYVAHVGYAFHLFNRRRKVGEGGMEASTPVRPMSGGMLIGLTTMLSF
LSLMTAIYWGRFSGCETGSNDVAGYSCYSASGMAAVSWFASLLLILQAGT
VWALVAWKDDLFESESGYDDFDGIAGGGGGGAAGGGAYAYDGAGMGGSTA
VQADL*
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