prot_S-ischiensis_contig7.18058.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig7.18058.1
Unique Nameprot_S-ischiensis_contig7.18058.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length102
Homology
BLAST of mRNA_S-ischiensis_contig7.18058.1 vs. uniprot
Match: A4S818_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S818_OSTLU)

HSP 1 Score: 70.5 bits (171), Expect = 1.660e-12
Identity = 37/90 (41.11%), Postives = 53/90 (58.89%), Query Frame = 0
Query:    1 MKGGFLELFRFSEMRAKLFPVLLTWAPGLLEASFKPEARVVPVENMVVRFRGDAIHRVQGYSTKTQGKRVSLVLEQYSVPLEHYGRTVRY 90
            M GG LELF + +              G  +    PE ++ P ENM+V FRGDA H+V+ Y T++  +RVSLVLEQY +  + YG+T+R+
Sbjct:  155 MVGGELELFPYGD--------------GYPDTGAAPEKKIRPKENMLVNFRGDAFHQVRSYKTRSGSERVSLVLEQYVIDDDAYGKTMRF 230          
BLAST of mRNA_S-ischiensis_contig7.18058.1 vs. uniprot
Match: A0A7R9T418_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A0A7R9T418_9CHLO)

HSP 1 Score: 70.5 bits (171), Expect = 3.250e-12
Identity = 37/90 (41.11%), Postives = 53/90 (58.89%), Query Frame = 0
Query:    1 MKGGFLELFRFSEMRAKLFPVLLTWAPGLLEASFKPEARVVPVENMVVRFRGDAIHRVQGYSTKTQGKRVSLVLEQYSVPLEHYGRTVRY 90
            M GG LELF + +              G  +    PE ++ P ENM+V FRGDA H+V+ Y T++  +RVSLVLEQY +  + YG+T+R+
Sbjct:  223 MVGGELELFPYGD--------------GYPDTGAAPEKKIRPKENMLVNFRGDAFHQVRSYKTRSGSERVSLVLEQYVIDDDAYGKTMRF 298          
BLAST of mRNA_S-ischiensis_contig7.18058.1 vs. uniprot
Match: L1JCM3_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JCM3_GUITC)

HSP 1 Score: 62.0 bits (149), Expect = 2.580e-9
Identity = 29/45 (64.44%), Postives = 33/45 (73.33%), Query Frame = 0
Query:   36 PEARVVPVENMVVRFRGDAIHRVQGYSTKTQGKRVSLVLEQYSVP 80
            P+  V P EN +V FRGDA HRV GY T+ Q KR+SLVLEQY VP
Sbjct:  182 PDEEVFPQENTMVAFRGDAYHRVMGYRTQIQKKRISLVLEQYQVP 226          
BLAST of mRNA_S-ischiensis_contig7.18058.1 vs. uniprot
Match: A0A7S0S048_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S048_9CHLO)

HSP 1 Score: 59.7 bits (143), Expect = 8.520e-9
Identity = 26/51 (50.98%), Postives = 37/51 (72.55%), Query Frame = 0
Query:   40 VVPVENMVVRFRGDAIHRVQGYSTKTQGKRVSLVLEQYSVPLEHYGRTVRY 90
            V P ENM+V FRGDA+H+V+ + + T  +RVSLV+EQY +   HY RT ++
Sbjct:  125 VTPKENMMVSFRGDALHKVEAFRSPTGERRVSLVVEQYKIAPHHYWRTTKF 175          
BLAST of mRNA_S-ischiensis_contig7.18058.1 vs. uniprot
Match: A0A5J4Z2V2_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2V2_PORPP)

HSP 1 Score: 61.2 bits (147), Expect = 8.690e-9
Identity = 29/58 (50.00%), Postives = 41/58 (70.69%), Query Frame = 0
Query:   37 EARVVPVENMVVRFRGDAIHRVQGYSTKTQGKRVSLVLEQYSVPLEHYGRTVRYHLSK 94
            ++R+ PV+N   RFRGDA H+V+GY+T+T  +RVSLVLEQY VP   +    +Y  S+
Sbjct:  329 KSRITPVQNKGARFRGDAYHQVRGYTTETDQRRVSLVLEQYRVPRRFHRYLSKYEHSE 386          
BLAST of mRNA_S-ischiensis_contig7.18058.1 vs. uniprot
Match: A0A2V0NUY4_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NUY4_9CHLO)

HSP 1 Score: 50.1 bits (118), Expect = 7.500e-5
Identity = 23/40 (57.50%), Postives = 30/40 (75.00%), Query Frame = 0
Query:   41 VPVENMVVRFRGDAIHRVQGYSTKTQGKRVSLVLEQYSVP 80
            VP EN +VRFRGDA+HRV+ + +     R+SLVLEQY +P
Sbjct:  338 VPRENKIVRFRGDALHRVRKHHSAKGEDRISLVLEQYLIP 377          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig7.18058.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A4S818_OSTLU1.660e-1241.11Uncharacterized protein n=1 Tax=Ostreococcus lucim... [more]
A0A7R9T418_9CHLO3.250e-1241.11Hypothetical protein n=1 Tax=Ostreococcus sp. 'luc... [more]
L1JCM3_GUITC2.580e-964.44Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S0S048_9CHLO8.520e-950.98Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A5J4Z2V2_PORPP8.690e-950.00Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A2V0NUY4_9CHLO7.500e-557.50Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 18..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 27..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig7contigS-ischiensis_contig7:1275314..1276463 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig7.18058.1mRNA_S-ischiensis_contig7.18058.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig7 1274964..1277269 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig7.18058.1 ID=prot_S-ischiensis_contig7.18058.1|Name=mRNA_S-ischiensis_contig7.18058.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=102bp
MKGGFLELFRFSEMRAKLFPVLLTWAPGLLEASFKPEARVVPVENMVVRF
RGDAIHRVQGYSTKTQGKRVSLVLEQYSVPLEHYGRTVRYHLSKGNADHY
K*
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