prot_S-ischiensis_contig68.17691.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig68.17691.1
Unique Nameprot_S-ischiensis_contig68.17691.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length265
Homology
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BLAST of mRNA_S-ischiensis_contig68.17691.1 vs. uniprot
Match: A0A836CJ86_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ86_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 9.610e-12
Identity = 50/170 (29.41%), Postives = 83/170 (48.82%), Query Frame = 0 
Query:    5 SRLRSSMEFKILQFFFMAEYQLPWDFDFAAYMRDNLDATILDAIEVEQVTWMILITLALLNVARLQVQEWAT--GDDEAVADSSXXXXXXXXXXXXXXXXXXXXXXXXXXX----TYGDEGGSTGMEAFTINGYLLLLGTVAFYFLARGSELALPRKAGCTDTASYKAVL 168
            SRLR SMEF IL+  F+  +++P +FDF  YMR ++D  IL  ++++ VTW+++I + L N  R    +     GDD+ +  +                                 Y +   ++G+ +F   G++L+L  V ++F+ RG EL L R+AG      Y+ VL
Sbjct:  140 SRLRDSMEFVILRHQFLRTFEVPLNFDFGLYMRYSIDEYILSLLDIQPVTWLVVIVVLLANWGRTAAMDALDDGGDDQHITAAEEVTHRAMAAATSTSMHDRPHLQYLFNFDLRSVYDNSVHNSGLVSFVAAGWVLVLLAVGYFFVTRGVELKLLRQAGVRRLKDYEQVL 309
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig68.17691.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CJ86_9STRA9.610e-1229.41EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..145
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 72..125
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 146..265
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..52
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig68contigS-ischiensis_contig68:278573..281267 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig68.17691.1mRNA_S-ischiensis_contig68.17691.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig68 276171..281267 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig68.17691.1 ID=prot_S-ischiensis_contig68.17691.1|Name=mRNA_S-ischiensis_contig68.17691.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=265bp
MSRSSRLRSSMEFKILQFFFMAEYQLPWDFDFAAYMRDNLDATILDAIEV
EQVTWMILITLALLNVARLQVQEWATGDDEAVADSSHSSSSSSTTTPSSH
RLLGGSTHSSSSSTYGDEGGSTGMEAFTINGYLLLLGTVAFYFLARGSEL
ALPRKAGCTDTASYKAVLLKYQQWNAKREQEHVVLSEAQMAQFKERSQAL
SRLAPVLHHDRPSSAVSSHGHDEAGGGQRALSPRGVLGSVSLRVPGLGSP
RGRVVAGHQDAELAG
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