prot_S-ischiensis_contig15.3523.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig15.3523.1
Unique Nameprot_S-ischiensis_contig15.3523.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length173
Homology
BLAST of mRNA_S-ischiensis_contig15.3523.1 vs. uniprot
Match: A0A7S2AZ30_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AZ30_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.140e-12
Identity = 41/83 (49.40%), Postives = 55/83 (66.27%), Query Frame = 0
Query:    8 RRVELQQEMEAEFLEQLVRGRPGLPSALRAEAREKVRRRMGEAVDAALSRRDQVLLPGNSRFGRIKAVPHCVACDRPLQNKAR 90
            RR E++++M  E L +  + RP    ALR EAR K   R+ EAVD AL++ + V+   N+RFGR+KAVP CVACDRPL  + R
Sbjct:    7 RRAEMREQMRVEVLREAAKIRPST-GALRIEARSKFCVRLMEAVDVALTKYETVVTLTNTRFGRVKAVPTCVACDRPLPTRKR 88          
BLAST of mRNA_S-ischiensis_contig15.3523.1 vs. uniprot
Match: A0A7S1TRI2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRI2_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 3.790e-11
Identity = 43/103 (41.75%), Postives = 65/103 (63.11%), Query Frame = 0
Query:    1 SDDEVAARRVELQQEMEAEFLEQLVRGRPGLP---------SALRAEAREKVRRRMGEAVDAALSRRDQVLLPGNSRFGRIKAVPHCVACDRPLQNKARARDA 94
            ++DE+  RR +++ E+  + LE  +R    LP         SA++ EAR K  +++ EA+D ALS+ DQVL+P  SRFGR+  +P CVACDRPL+ K   ++A
Sbjct:  378 ANDEMGQRRAQVRDELVFQ-LETTMRRMDELPHKPQLHKRHSAVKQEARRKFAKKLEEALDIALSKIDQVLIPNASRFGRVANLPVCVACDRPLRTKMSRKEA 479          
BLAST of mRNA_S-ischiensis_contig15.3523.1 vs. uniprot
Match: A0A7S3XTU6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTU6_HETAK)

HSP 1 Score: 61.2 bits (147), Expect = 7.120e-8
Identity = 32/66 (48.48%), Postives = 43/66 (65.15%), Query Frame = 0
Query:   32 PSALRAEAREKVRRRMGEAVDAALSRRDQVLLPGNSRFGRIKAVPHCVACDRPLQNKARARDAMGQ 97
            P ALRAEAR    R++ +A+D ALS+ DQVL+P  +RF   +  P C+ACDRPL  K R ++   Q
Sbjct:  205 PGALRAEARGVFHRKLRDALDTALSKHDQVLMPSYTRFEGTRP-PVCIACDRPLGAKRRVKELAPQ 269          
BLAST of mRNA_S-ischiensis_contig15.3523.1 vs. uniprot
Match: K0S2S6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S2S6_THAOC)

HSP 1 Score: 53.5 bits (127), Expect = 3.810e-5
Identity = 37/99 (37.37%), Postives = 60/99 (60.61%), Query Frame = 0
Query:    1 SDDEVAARRVELQQEMEAEF---LEQLVRGRPGLPSA----LRAEAREKVRRRMGEAVDAALSRRDQVLLPGNSRFGRIKA----VPHCVACDRPLQNK 88
            ++D++  RR  L +E++++    LE+L+    G+ S     LR EAR     R+ +AV+AAL++ DQ+LLP  +  GR++     V  CVACDRP++ K
Sbjct:  672 AEDDMLERRAGLCEELKSDVGAALEKLIAEERGVVSTRGLGLRWEARAIFLARLVDAVEAALTKHDQILLPAATSLGRVRPLSANVTVCVACDRPMRRK 770          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig15.3523.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7S2AZ30_9STRA2.140e-1249.40Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S1TRI2_9STRA3.790e-1141.75Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S3XTU6_HETAK7.120e-848.48Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
K0S2S6_THAOC3.810e-537.37Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig15contigS-ischiensis_contig15:447007..449225 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig15.3523.1mRNA_S-ischiensis_contig15.3523.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig15 447007..449227 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig15.3523.1 ID=prot_S-ischiensis_contig15.3523.1|Name=mRNA_S-ischiensis_contig15.3523.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=173bp
SDDEVAARRVELQQEMEAEFLEQLVRGRPGLPSALRAEAREKVRRRMGEA
VDAALSRRDQVLLPGNSRFGRIKAVPHCVACDRPLQNKARARDAMGQDNL
RQSPHGPPHPRPGAKGPGPGSGPGPGPATGPGPGPGAGPRPTPQSGFESG
ERPSRPGLGRASGLGEAGGSKLG
back to top