prot_S-ischiensis_contig13.3144.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig13.3144.1
Unique Nameprot_S-ischiensis_contig13.3144.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length172
Homology
BLAST of mRNA_S-ischiensis_contig13.3144.1 vs. uniprot
Match: A0A2I4HQE3_JUGRE (tyrosyl-DNA phosphodiesterase 1 isoform X1 n=4 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4HQE3_JUGRE)

HSP 1 Score: 61.6 bits (148), Expect = 5.920e-8
Identity = 45/116 (38.79%), Postives = 55/116 (47.41%), Query Frame = 0
Query:    1 MSGAAWGLLEKKGKGDQEQLFSKSYELGVIFLPSRIGRRCPPGHSFAFSCDPTG---------------PLTTRYPLTYGGVPREEMEGVGIPLDLLPMPYHLPGPSYTFPQDRPW 101
            +S AAWG L+K    +  QL  +SYELGV+FLPS   R     H   FSC   G               P TT+  LT+ G    +     IPL   P+PY LP   YT P+D PW
Sbjct:  561 LSKAAWGALQK----NNTQLMIRSYELGVLFLPSSTER-----HGSEFSCTSNGDVMEDKSRLLENSEVPRTTQVTLTWQGSRNSDPTSEVIPL---PIPYELPPQPYT-PEDVPW 663          
BLAST of mRNA_S-ischiensis_contig13.3144.1 vs. uniprot
Match: A0A8B8M002_ABRPR (tyrosyl-DNA phosphodiesterase 1 isoform X1 n=3 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8M002_ABRPR)

HSP 1 Score: 57.8 bits (138), Expect = 1.240e-6
Identity = 46/121 (38.02%), Postives = 59/121 (48.76%), Query Frame = 0
Query:    1 MSGAAWGLLEKKGKGDQEQLFSKSYELGVIFLPSRIGRRCPPGHSFAFSCDP------------TGPLTTRYPLTYGGVPREEMEG---VGIPLDLLPMPYHLPGPSYTFPQDRPWVAPRE 106
            +S AAWG L+K    +  QL  +S+ELGV+FLPS   R     H FAFSC              T  +     +T  G+ RE+M     V IPL   P+PY LP   Y+  QD PW   R+
Sbjct:  525 LSKAAWGALQK----NNTQLMIRSFELGVLFLPSLFKR-----HGFAFSCTSNVVSKDKCSSKETSEMKKTKLVTLPGLTREKMHSSSEVDIPL---PVPYELPPLPYSS-QDVPWSWDRQ 632          
BLAST of mRNA_S-ischiensis_contig13.3144.1 vs. uniprot
Match: A0A7I8KB26_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KB26_SPIIN)

HSP 1 Score: 57.0 bits (136), Expect = 2.310e-6
Identity = 37/101 (36.63%), Postives = 54/101 (53.47%), Query Frame = 0
Query:    1 MSGAAWGLLEKKGKGDQEQLFSKSYELGVIFLPSRIGRRCPPGHSFAFSCDPTGPLTTRYPLTYGGVPREEMEGVGIPLDLLPMPYHLPGPSYTFPQDRPW 101
            +S AAWG L+K    +  QLF +SYELGV+FLPS++      GH+        G  +    +T GG+   + +     + + P+PY LP   YT P+D PW
Sbjct:  566 LSKAAWGALQK----NNSQLFIRSYELGVLFLPSKLQ-----GHALPNFSTLVGQCSNTRLVTLGGLGTGQADSSTNVISI-PVPYELPPQPYT-PEDVPW 655          
BLAST of mRNA_S-ischiensis_contig13.3144.1 vs. uniprot
Match: D8RES1_SELML (Uncharacterized protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RES1_SELML)

HSP 1 Score: 56.6 bits (135), Expect = 2.920e-6
Identity = 39/113 (34.51%), Postives = 52/113 (46.02%), Query Frame = 0
Query:    1 MSGAAWGLLEKKGKGDQEQLFSKSYELGVIFLPSRIGRRCPPGHSFAFSCDPTGPLTTRYPLTYGGVPR------------EEMEGVGIPLDLLPMPYHLPGPSYTFPQDRPW 101
            +S AAWG L+K    ++ QL  +SYELGV+FLPS + +         +SC    PL         G P             +E E     +  LP+PY LP P Y+  QD PW
Sbjct:  371 LSKAAWGALQK----NKTQLMIRSYELGVVFLPSMLSK-----FKNRYSCTEDLPLINENEACKTGAPNVKLYTLAATESMDEEEDTNAKIIRLPLPYALPPPRYSS-QDEPW 473          
BLAST of mRNA_S-ischiensis_contig13.3144.1 vs. uniprot
Match: A0A843WMX0_COLES (Uncharacterized protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843WMX0_COLES)

HSP 1 Score: 56.6 bits (135), Expect = 3.130e-6
Identity = 43/112 (38.39%), Postives = 57/112 (50.89%), Query Frame = 0
Query:    1 MSGAAWGLLEKKGKGDQEQLFSKSYELGVIFLPSRIGRRCPPGHSFAFSCDPTGPLTTRYPLTYGGVPREEMEGVGI------PLDL-----LPMPYHLPGPSYTFPQDRPW 101
            +S AAWG L+K    +  QLF +SYELGV+FLP ++  R P     +FSC  +G L    P       R+E +   +        DL     LP+PY LP P YT  +D PW
Sbjct:  547 LSKAAWGALQK----NNSQLFIRSYELGVLFLPYKLQGRAP-----SFSCTDSGHLA-EVPSKNHDEERKETKFATLCWQENKTTDLCNVIRLPVPYELPPPPYTS-EDVPW 647          
BLAST of mRNA_S-ischiensis_contig13.3144.1 vs. uniprot
Match: UPI000CE1DD48 (tyrosyl-DNA phosphodiesterase 1-like n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE1DD48)

HSP 1 Score: 53.1 bits (126), Expect = 6.550e-6
Identity = 41/116 (35.34%), Postives = 52/116 (44.83%), Query Frame = 0
Query:    1 MSGAAWGLLEKKGKGDQEQLFSKSYELGVIFLPSRIGRRCPPGHSFAFSCDPTGPL---------------TTRYPLTYGGVPREEMEGVGIPLDLLPMPYHLPGPSYTFPQDRPW 101
            +S AAWG L+K    +  QL  +SYELGV+FLPS   R     +   FSC   G +               T    LT+ G    +     IPL   P+PY LP   YT  +D PW
Sbjct:   25 LSKAAWGALQK----NNSQLMIRSYELGVLFLPSSFER-----YGSGFSCTSNGDIKEDKCRSLENSEVRRTKLVTLTWQGSRNSDSSSDVIPL---PVPYELPPQPYTS-EDVPW 127          
BLAST of mRNA_S-ischiensis_contig13.3144.1 vs. uniprot
Match: A0A452HMM0_9SAUR (Tyrosyl-DNA phosphodiesterase 1 n=22 Tax=Durocryptodira TaxID=1579337 RepID=A0A452HMM0_9SAUR)

HSP 1 Score: 54.7 bits (130), Expect = 1.410e-5
Identity = 40/102 (39.22%), Postives = 49/102 (48.04%), Query Frame = 0
Query:    1 MSGAAWGLLEKKGKGDQEQLFSKSYELGVIFLPSRIGRRCPPGHSFAFSCDPTGPLTTRYPLTYGGVPREEMEGVGIPLDLLPMPYHLPGPSYTFPQDRPWV 102
            +S AAWG LEK G     QL  +SYELGV+FLPS            AF  D TG         Y  V ++   G   P+   P+PY LP   Y   +DRPW+
Sbjct:  517 LSKAAWGALEKNGT----QLMIRSYELGVLFLPS------------AFGLD-TG---------YFHVKKKMFSGSNEPVTSFPVPYDLPPEQYGS-KDRPWI 591          
BLAST of mRNA_S-ischiensis_contig13.3144.1 vs. uniprot
Match: A0A7N0UD36_KALFE (FHA_2 domain-containing protein n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0UD36_KALFE)

HSP 1 Score: 54.7 bits (130), Expect = 1.440e-5
Identity = 43/131 (32.82%), Postives = 62/131 (47.33%), Query Frame = 0
Query:    1 MSGAAWGLLEKKGKGDQEQLF---------------SKSYELGVIFLPSRIGRRCPPGHSFAFSC--------------DPTGPLTTRY-PLTYGGVPREEMEGVGIPLDLLPMPYHLPGPSYTFPQDRPW 101
            +S AAWG L+K       + +               SKS++LGV+FLPSRI  +    H  AFSC              + TGP++T+   L++ GV  E+     +    LP+PY LP   Y+ P+D PW
Sbjct:  537 LSKAAWGALQKSNSQLMIRSYEINAQLAHMCLTIFSSKSFQLGVLFLPSRINSQ---SHGSAFSCTAVGTSSKESPRSVEATGPVSTKLVTLSWPGVENEDPSSEEV--IRLPVPYELPPQPYS-PEDVPW 661          
BLAST of mRNA_S-ischiensis_contig13.3144.1 vs. uniprot
Match: A0A2I0WR57_9ASPA (Tyrosyl-DNA phosphodiesterase 1 n=4 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WR57_9ASPA)

HSP 1 Score: 54.3 bits (129), Expect = 1.950e-5
Identity = 40/110 (36.36%), Postives = 53/110 (48.18%), Query Frame = 0
Query:    1 MSGAAWGLLEKKGKGDQEQLFSKSYELGVIFLPSRIGRRCPPGHSFAFSCDPTGPL---------TTRYPLTYGGVPREEMEGVGIPLDLLPMPYHLPGPSYTFPQDRPW 101
            +S AAWG L+K    +  QL  +SYELGV+FLPS +      G+   FSC   G +         T    L + G P    E +      LP+PY LP   Y+ P+D PW
Sbjct:  568 LSKAAWGALQK----NNSQLMIRSYELGVLFLPSVMK-----GNLSQFSCTGNGDMKQMSTKNGKTKLVTLCWNGEPDSSSEII----IRLPVPYQLPAQPYS-PEDMPW 663          
BLAST of mRNA_S-ischiensis_contig13.3144.1 vs. uniprot
Match: K7G564_PELSI (Uncharacterized protein n=12 Tax=Cryptodira TaxID=8464 RepID=K7G564_PELSI)

HSP 1 Score: 53.9 bits (128), Expect = 2.590e-5
Identity = 40/102 (39.22%), Postives = 48/102 (47.06%), Query Frame = 0
Query:    1 MSGAAWGLLEKKGKGDQEQLFSKSYELGVIFLPSRIGRRCPPGHSFAFSCDPTGPLTTRYPLTYGGVPREEMEGVGIPLDLLPMPYHLPGPSYTFPQDRPWV 102
            +S AAWG LEK G     QL  +SYELGV+FLPS            AF  D TG         Y  V  +   G   P+   P+PY LP   Y   +DRPW+
Sbjct:  517 LSKAAWGALEKNGT----QLMIRSYELGVLFLPS------------AFGLD-TG---------YFHVKTKMFSGSNEPMTSFPVPYDLPPEQYGS-KDRPWI 591          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig13.3144.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A2I4HQE3_JUGRE5.920e-838.79tyrosyl-DNA phosphodiesterase 1 isoform X1 n=4 Tax... [more]
A0A8B8M002_ABRPR1.240e-638.02tyrosyl-DNA phosphodiesterase 1 isoform X1 n=3 Tax... [more]
A0A7I8KB26_SPIIN2.310e-636.63Hypothetical protein n=1 Tax=Spirodela intermedia ... [more]
D8RES1_SELML2.920e-634.51Uncharacterized protein n=4 Tax=Selaginella moelle... [more]
A0A843WMX0_COLES3.130e-638.39Uncharacterized protein n=1 Tax=Colocasia esculent... [more]
UPI000CE1DD486.550e-635.34tyrosyl-DNA phosphodiesterase 1-like n=1 Tax=Querc... [more]
A0A452HMM0_9SAUR1.410e-539.22Tyrosyl-DNA phosphodiesterase 1 n=22 Tax=Durocrypt... [more]
A0A7N0UD36_KALFE1.440e-532.82FHA_2 domain-containing protein n=2 Tax=Kalanchoe ... [more]
A0A2I0WR57_9ASPA1.950e-536.36Tyrosyl-DNA phosphodiesterase 1 n=4 Tax=Dendrobium... [more]
K7G564_PELSI2.590e-539.22Uncharacterized protein n=12 Tax=Cryptodira TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010347Tyrosyl-DNA phosphodiesterase IPFAMPF06087Tyr-DNA_phosphocoord: 1..93
e-value: 1.4E-6
score: 27.5
IPR010347Tyrosyl-DNA phosphodiesterase IPANTHERPTHR12415TYROSYL-DNA PHOSPHODIESTERASE 1coord: 1..114
IPR027415Tyrosyl-DNA phosphodiesterase, C-terminalGENE3D3.30.870.20coord: 1..115
e-value: 2.3E-10
score: 42.4
NoneNo IPR availableSUPERFAMILY56024Phospholipase D/nucleasecoord: 1..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig13contigS-ischiensis_contig13:3052087..3054413 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig13.3144.1mRNA_S-ischiensis_contig13.3144.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig13 3051932..3054480 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig13.3144.1 ID=prot_S-ischiensis_contig13.3144.1|Name=mRNA_S-ischiensis_contig13.3144.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=172bp
MSGAAWGLLEKKGKGDQEQLFSKSYELGVIFLPSRIGRRCPPGHSFAFSC
DPTGPLTTRYPLTYGGVPREEMEGVGIPLDLLPMPYHLPGPSYTFPQDRP
WVAPREEDGVGAEDQGQAQDPGPWGRGQEWQEVKQGWECHLPDRFGGCIP
CPPDWAGENGQGSVPVQCPIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010347Tdp1
IPR027415TDP_C