prot_S-ischiensis_contig13.2918.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig13.2918.1
Unique Nameprot_S-ischiensis_contig13.2918.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length464
Homology
BLAST of mRNA_S-ischiensis_contig13.2918.1 vs. uniprot
Match: D8LHX3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHX3_ECTSI)

HSP 1 Score: 249 bits (637), Expect = 5.900e-74
Identity = 146/373 (39.14%), Postives = 197/373 (52.82%), Query Frame = 0
Query:    3 NIAVVAVGRPFFVFTIGGMVLSIILGVTALVMGVSEGYFTYELDRCDCVPEGEA--------------------------CAEGVDFMEVGFGWQDMTISGSGSTTTC---------------------------LLDAGYEEGAKFPLADPLGEGFEVNGMPKAAEGFMVMMCITSGLAFLTHSVVKASYVGNGSHCSIGLTTFARLCFLSSLISLALAVSYWWLLDGRFGDDSDSVPARLTEGVLEECSKDWDVTAES--------CPDRPWQLTLGGWALMVAMAQVGLFFITSLGLVWRAPIIEGMLDGSIDDKGNPMQPRRVEVELVVGKALATDGDPDYDIPQNIMYEGNSTMVRPYPLPVTAKQAK 314
            N AVVAVGR FF   I G  LS +    ++++GVS+GYF +E+DRC CV E EA                          C  G DF +V  GW++ T      T  C                             D  Y    +F   D   +  E NG  +A  G + M  + +  + LT+ ++KASY+ NGSHCSIGL    RL  L  + + A  VS+WWL++GRFGD+  ++   L   + +EC   W  TA+         CP RPW  T  G  +M+ + QVGLF + +L +VW+AP +EG+LDGS+D  G  ++PR VEVE+VVGKALATDGDPDYD  +N +Y G +TM+RPYPLP +AK AK
Sbjct:    6 NAAVVAVGRTFFRVAIVGYTLSGLAMFPSVILGVSKGYFEWEMDRCTCVVEQEAAATTGQPIVSSSSLSGTGTTAGASSSCVFGQDFAKVSIGWKEFTYDKLVHTVGCPIATAFYEANPALDDDDLNLDNERSLYFFDEVYPLDGEFQKTDNPTQADESNGGSEAGGGVVAMQVVLTFFSILTYKMLKASYLSNGSHCSIGLALMTRLNLLVGVGTAAAIVSFWWLIEGRFGDEQKALTTALENILFDEC---WGETADDDAAGLQTFCPVRPWTFTGPGLPMMLGIFQVGLFLLMTLYMVWKAPTVEGVLDGSMDPTGVVLKPRVVEVEMVVGKALATDGDPDYDS-ENPLYNGAATMIRPYPLPKSAKAAK 374          
BLAST of mRNA_S-ischiensis_contig13.2918.1 vs. uniprot
Match: D7G1J1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J1_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 3.250e-37
Identity = 106/312 (33.97%), Postives = 153/312 (49.04%), Query Frame = 0
Query:   66 VGFGWQDMTISGSGSTTTCLLDAGYEEGAKFPLADPLGEGFEV-------NGMPKAAEGFMVMMCITSGLAFLTHSVVKASYVGNGSHCSIGLTTFARLCFLSSLISLALAVSYWWLLDGRFGDDSDSVPARLTEGVLEECSKDWDVTA------ES----CPDRPWQLTLGGWALMVAMAQVGLFFITSLGLVWRAPIIEGMLDGSIDDKGNPMQPRRVEVELVVGKALATDGDPDYDIPQNIMYEGNST-MVRPYPLPVTAKQAKGAAVQPQATEPAADEEGGSPTVFQRENFFYVGGHRATSAEAARGG 359
            V  GW+   I  + ST  CL   G+E G K  +  P G+G          NG   AA+  + +  +++ +A +    VK SY G GS  SIGL   A +C L S+ S     ++W  + G+ GD   S+ A L    L+ C  DWD         ES    C  +PW   +  +A   A+A V + F+TS+ ++ ++ ++EG+LDGS    G  + PR VE E  VG+ALAT  DPDYD+  N +Y G +  M+RPYPLP + K+   AA       P    +GGSP    ++N    G       + A GG
Sbjct:   26 VDIGWKSFVIDKAYSTEGCL--DGWE-GTK-DIGSPFGDGIYRKKSAVYGNGATGAADASVGLFVVSAFIAIIMFKTVKMSYTGPGSIYSIGLHNIAVMCLLLSVASGISIAAFWGRIQGKLGDMESSLAATLFMATLDVCEDDWDTVGFPVGEGESEEIFCQAKPWNFEVPLYAGWTAIAHVAVMFLTSVWILTKSGLVEGILDGSKLVGGKAVTPRVVEYEQAVGRALATTEDPDYDVSDNKLYTGEANIMIRPYPLPGSVKKVAKAAEA--LVSPLRKMQGGSPK-HTKDNTLRTGERAGVRPKIALGG 330          
BLAST of mRNA_S-ischiensis_contig13.2918.1 vs. uniprot
Match: A0A6H5L9G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9G0_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 2.060e-6
Identity = 35/86 (40.70%), Postives = 52/86 (60.47%), Query Frame = 0
Query:  235 FITSLGLVWRAPIIEGMLDGS--IDDKGNPMQPRRVEVELVVGKALATDGDPDYDIPQNIMYEGNST-MVRPYPLPVTAKQAKGAA 317
            F+TS+ ++ ++ ++EG+LDGS  +D K              VG+ALAT  DPDYD+  N +Y G +  M+RPYPLP + K+   AA
Sbjct:    2 FLTSVWILSKSGLVEGILDGSKLVDGKA----------VTAVGRALATTEDPDYDVSDNKLYTGEANIMIRPYPLPGSVKKVAKAA 77          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig13.2918.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LHX3_ECTSI5.900e-7439.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G1J1_ECTSI3.250e-3733.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L9G0_9PHAE2.060e-640.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 244..463
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 222..243
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 157..175
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 118..136
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 137..156
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 176..221
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..117
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 221..243
NoneNo IPR availableTMHMMTMhelixcoord: 157..176
NoneNo IPR availableTMHMMTMhelixcoord: 114..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig13contigS-ischiensis_contig13:596183..604528 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig13.2918.1mRNA_S-ischiensis_contig13.2918.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig13 595508..605025 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig13.2918.1 ID=prot_S-ischiensis_contig13.2918.1|Name=mRNA_S-ischiensis_contig13.2918.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=464bp
MPNIAVVAVGRPFFVFTIGGMVLSIILGVTALVMGVSEGYFTYELDRCDC
VPEGEACAEGVDFMEVGFGWQDMTISGSGSTTTCLLDAGYEEGAKFPLAD
PLGEGFEVNGMPKAAEGFMVMMCITSGLAFLTHSVVKASYVGNGSHCSIG
LTTFARLCFLSSLISLALAVSYWWLLDGRFGDDSDSVPARLTEGVLEECS
KDWDVTAESCPDRPWQLTLGGWALMVAMAQVGLFFITSLGLVWRAPIIEG
MLDGSIDDKGNPMQPRRVEVELVVGKALATDGDPDYDIPQNIMYEGNSTM
VRPYPLPVTAKQAKGAAVQPQATEPAADEEGGSPTVFQRENFFYVGGHRA
TSAEAARGGKPSAGQEAPITSSSGNGEAPPLSPSATSQVSSPGTEDSEDV
SVEENDREARDVFHPSNMTVIAEGSDEDDMSSVADHSVISSRSPMHPPVH
QDSIPEEETEGSA*
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