prot_S-ischiensis_contig12.2720.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig12.2720.1
Unique Nameprot_S-ischiensis_contig12.2720.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length165
Homology
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BLAST of mRNA_S-ischiensis_contig12.2720.1 vs. uniprot
Match: E1ZK54_CHLVA (DUF2428 domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZK54_CHLVA)

HSP 1 Score: 53.9 bits (128), Expect = 2.510e-5
Identity = 46/92 (50.00%), Postives = 58/92 (63.04%), Query Frame = 0 
Query:    8 AARRA-TLTEFFRRHPSLHPFLLQHLRQATAEAMEDGAEPANRVTIGRLSGGXXXXXXXXXXXGLHPVLYPILLLLSRL--TPELRVEGVGG 96
            AA+RA T  +FF RHP LHPFLL+ L  AT EA++ GA  A  +          XXXXXXXXX +HP L+P+L+LLSRL  +   R+ G  G
Sbjct: 1548 AAKRAPTAADFFARHPQLHPFLLRQLAAAT-EALDGGAAAAGSIXXXXXX----XXXXXXXXXXMHPSLFPVLVLLSRLRASQHNRLSGSSG 1634
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BLAST of mRNA_S-ischiensis_contig12.2720.1 vs. uniprot
Match: A0A6H5JLY3_9PHAE (DUF2428 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLY3_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 4.590e-5
Identity = 44/85 (51.76%), Postives = 50/85 (58.82%), Query Frame = 0 
Query:    1 GSASARRAARRATLTEFFRRHPSLHPFLLQHLRQATAEAMEDGAEPANRVTIGRLSGGXXXXXXXXXXXGLHPVLYPILLLLSRL 85
            GS   R A    T   FF++HP LHPFLL  L +AT    E G   +     G   G   XXXXXXXXX +HPVLYPILLLL+RL
Sbjct: 1141 GSKRPRSARAAVTAEAFFQQHPKLHPFLLSELERATNCTPEAGTGSS-----GEKEGQRAXXXXXXXXXEMHPVLYPILLLLARL 1220
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig12.2720.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
E1ZK54_CHLVA2.510e-550.00DUF2428 domain-containing protein n=1 Tax=Chlorell... [more]
A0A6H5JLY3_9PHAE4.590e-551.76DUF2428 domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR14387THADA/DEATH RECEPTOR INTERACTING PROTEINcoord: 7..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig12contigS-ischiensis_contig12:2552781..2554614 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig12.2720.1mRNA_S-ischiensis_contig12.2720.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig12 2552779..2554614 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig12.2720.1 ID=prot_S-ischiensis_contig12.2720.1|Name=mRNA_S-ischiensis_contig12.2720.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=165bp
GSASARRAARRATLTEFFRRHPSLHPFLLQHLRQATAEAMEDGAEPANRV
TIGRLSGGGGGGSSGLGGGGLHPVLYPILLLLSRLTPELRVEGVGGGGGG
AAAAKATPAGVATAVASGPVITDDGPGPGPAGGGPGGSGPGGSGPGEAFV
PAVLRCRGSCNFYVR
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