prot_S-ischiensis_contig12.2670.1 (polypeptide) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig12.2670.1 vs. uniprot
Match: D8LFM1_ECTSI (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFM1_ECTSI) HSP 1 Score: 57.8 bits (138), Expect = 5.470e-8 Identity = 35/66 (53.03%), Postives = 40/66 (60.61%), Query Frame = 0
Query: 3 PGLAPPGPVTEDLLLLQQSHEQAVRRLGGTVLRADMASYLSANPG-----AVFADFVRWYRPHWWE 63
P L GPVTED+L QQ+ QA G VL ADM ++ S N G AVFADFVRWYRP W+
Sbjct: 1240 PRLQECGPVTEDMLR-QQTLGQAAAYRGREVLLADMTAFRSENGGGDGDAAVFADFVRWYRPECWQ 1304
BLAST of mRNA_S-ischiensis_contig12.2670.1 vs. uniprot
Match: A0A6H5JCY7_9PHAE (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCY7_9PHAE) HSP 1 Score: 57.0 bits (136), Expect = 1.020e-7 Identity = 34/66 (51.52%), Postives = 40/66 (60.61%), Query Frame = 0
Query: 3 PGLAPPGPVTEDLLLLQQSHEQAVRRLGGTVLRADMASYLSANPG-----AVFADFVRWYRPHWWE 63
P L GPVTED+L QQ+ QA G VL ADM ++ + N G AVFADFVRWYRP W+
Sbjct: 1248 PRLQESGPVTEDMLK-QQTLGQAPAYRGREVLLADMTAFRAENDGGDRDAAVFADFVRWYRPECWQ 1312
BLAST of mRNA_S-ischiensis_contig12.2670.1 vs. uniprot
Match: A0A6H5L3A9_9PHAE (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3A9_9PHAE) HSP 1 Score: 56.6 bits (135), Expect = 1.400e-7 Identity = 32/57 (56.14%), Postives = 40/57 (70.18%), Query Frame = 0
Query: 19 QQSHEQAVRRLGGTVLRADMASYLSANPGAVFADFVRWYRP-HWWEPCGGGEEAEVA 74
QQS+ +A RL + L ADM +LSANPGAVFADF+RWY P +W + GG+ A VA
Sbjct: 1163 QQSNTRA-SRLRLSTLSADMQCFLSANPGAVFADFLRWYSPPNWSDGPEGGDAACVA 1218
BLAST of mRNA_S-ischiensis_contig12.2670.1 vs. uniprot
Match: A0A024GG04_9STRA (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GG04_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 3.570e-7 Identity = 31/78 (39.74%), Postives = 40/78 (51.28%), Query Frame = 0
Query: 10 PVTEDLLLLQQSHEQAVRRLGGT-------------VLRADMASYLSANPGAVFADFVRWYRPHWWEPCGGGEEAEVA 74
P+TED+ Q HE+ + RLGGT L +DM ++ +ANPGAV ADF+RWY P W G A
Sbjct: 870 PLTEDIA---QQHEEILTRLGGTSESVRLRQEMQSATLVSDMQAFKAANPGAVLADFIRWYTPKDWTSFEQGFSVSTA 944
BLAST of mRNA_S-ischiensis_contig12.2670.1 vs. uniprot
Match: A0A7S4IBV9_9EUKA (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IBV9_9EUKA) HSP 1 Score: 52.0 bits (123), Expect = 5.790e-6 Identity = 30/68 (44.12%), Postives = 41/68 (60.29%), Query Frame = 0
Query: 9 GPVTEDLLLLQQSHEQAVRRLGGTV-----LRADMASYLSANPGAVFADFVRWYRPHWWEPCGGGEEA 71
G V+ED++ QQ QA+ G + L++DM S+ +ANPG VFADFVRWY P W G++A
Sbjct: 240 GLVSEDMIEEQQ---QALESEGDSSQHHAQLKSDMQSFKAANPGCVFADFVRWYSPADWLEENSGDQA 304 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig12.2670.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_S-ischiensis_contig12.2670.1 ID=prot_S-ischiensis_contig12.2670.1|Name=mRNA_S-ischiensis_contig12.2670.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=74bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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